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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1891 O_BomoMG12912_complete:A_BomoMG_comp39322_c0_seq3
302bp
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
1892 O_BomoMG12913_complete:A_BomoMG_comp39322_c0_seq4
302bp
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
1893 O_BomoMG12914_5prime_partial:A_BomoMG_comp39322_c1_seq1
201bp
GO:0005515 F protein binding
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
1894 O_BomoMG12915_complete:A_BomoMG_comp39324_c0_seq1
717bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:1900052 P regulation of retinoic acid biosynthetic process
1895 O_BomoMG12917_complete:A_BomoMG_comp39324_c0_seq2
712bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:1900052 P regulation of retinoic acid biosynthetic process
1896 O_BomoMG12919_3prime_partial:A_BomoMG_comp39325_c0_seq1
622bp
GO:0000938 C GARP complex
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0032456 P endocytic recycling
GO:0042147 P retrograde transport, endosome to Golgi
GO:0055037 C recycling endosome
GO:1990745 C EARP complex
1897 O_BomoMG1291_complete:A_BomoMG_comp20129_c0_seq1
524bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_glucosidase_2_subunit_beta-like_[Bombyx_mori]
GO:0005080 F protein kinase C binding
GO:0005509 F calcium ion binding
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006457 P protein folding
GO:0006491 P N-glycan processing
GO:0035556 P intracellular signal transduction
GO:0044325 F transmembrane transporter binding
GO:0046872 F metal ion binding
GO:0051219 F phosphoprotein binding
1898 O_BomoMG12921_5prime_partial:A_BomoMG_comp39325_c0_seq2
202bp
GO:0000938 C GARP complex
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0032456 P endocytic recycling
GO:0042147 P retrograde transport, endosome to Golgi
GO:0055037 C recycling endosome
GO:1990745 C EARP complex
1899 O_BomoMG12922_5prime_partial:A_BomoMG_comp39325_c0_seq3
187bp
GO:0000938 C GARP complex
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0032456 P endocytic recycling
GO:0042147 P retrograde transport, endosome to Golgi
GO:0055037 C recycling endosome
GO:1990745 C EARP complex
1900 O_BomoMG12924_3prime_partial:A_BomoMG_comp39326_c0_seq2
116bp
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006913 P nucleocytoplasmic transport
GO:0048471 C perinuclear region of cytoplasm
1901 O_BomoMG12925_5prime_partial:A_BomoMG_comp39326_c0_seq3
157bp
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005875 C microtubule associated complex
GO:0006913 P nucleocytoplasmic transport
GO:0007017 P microtubule-based process
GO:0008017 F microtubule binding
GO:0019212 F phosphatase inhibitor activity
GO:0043086 P negative regulation of catalytic activity
GO:0048471 C perinuclear region of cytoplasm
1902 O_BomoMG12927_complete:A_BomoMG_comp39327_c0_seq1
589bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0048812 P neuron projection morphogenesis
1903 O_BomoMG12929_5prime_partial:A_BomoMG_comp39328_c0_seq1
261bp
GO:0000151 C ubiquitin ligase complex
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007265 P Ras protein signal transduction
GO:0008139 F nuclear localization sequence binding
GO:0008270 F zinc ion binding
GO:0009968 P negative regulation of signal transduction
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031965 C nuclear membrane
GO:0042802 F identical protein binding
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
1904 O_BomoMG12932_3prime_partial:A_BomoMG_comp39328_c0_seq2
106bp
GO:0000151 C ubiquitin ligase complex
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007265 P Ras protein signal transduction
GO:0008139 F nuclear localization sequence binding
GO:0008270 F zinc ion binding
GO:0009968 P negative regulation of signal transduction
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031965 C nuclear membrane
GO:0042802 F identical protein binding
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
1905 O_BomoMG12933_internal:A_BomoMG_comp39328_c0_seq3
319bp
GO:0000151 C ubiquitin ligase complex
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007265 P Ras protein signal transduction
GO:0008139 F nuclear localization sequence binding
GO:0008270 F zinc ion binding
GO:0009968 P negative regulation of signal transduction
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031965 C nuclear membrane
GO:0042802 F identical protein binding
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
1906 O_BomoMG12936_3prime_partial:A_BomoMG_comp39329_c0_seq1
237bp
1907 O_BomoMG12937_3prime_partial:A_BomoMG_comp39329_c0_seq3
238bp
1908 O_BomoMG12938_3prime_partial:A_BomoMG_comp39331_c2_seq1
675bp
GO:0000166 F nucleotide binding
GO:0004176 F ATP-dependent peptidase activity
GO:0004222 F metalloendopeptidase activity
GO:0005524 F ATP binding
GO:0005743 C mitochondrial inner membrane
GO:0006508 P proteolysis
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0007005 P mitochondrion organization
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
1909 O_BomoMG1293_5prime_partial:A_BomoMG_comp20130_c0_seq1
157bp
 mobility_group_protein_1B_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
1910 O_BomoMG12941_complete:A_BomoMG_comp39331_c2_seq2
504bp
GO:0000166 F nucleotide binding
GO:0004176 F ATP-dependent peptidase activity
GO:0004222 F metalloendopeptidase activity
GO:0005524 F ATP binding
GO:0005743 C mitochondrial inner membrane
GO:0006508 P proteolysis
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0007005 P mitochondrion organization
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
1911 O_BomoMG12943_3prime_partial:A_BomoMG_comp39331_c2_seq3
671bp
GO:0000166 F nucleotide binding
GO:0004176 F ATP-dependent peptidase activity
GO:0004222 F metalloendopeptidase activity
GO:0005524 F ATP binding
GO:0005743 C mitochondrial inner membrane
GO:0006508 P proteolysis
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0007005 P mitochondrion organization
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
1912 O_BomoMG12946_complete:A_BomoMG_comp39331_c2_seq4
504bp
GO:0000166 F nucleotide binding
GO:0004176 F ATP-dependent peptidase activity
GO:0004222 F metalloendopeptidase activity
GO:0005524 F ATP binding
GO:0005743 C mitochondrial inner membrane
GO:0006508 P proteolysis
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0007005 P mitochondrion organization
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
1913 O_BomoMG12948_complete:A_BomoMG_comp39331_c2_seq5
508bp
GO:0000166 F nucleotide binding
GO:0004176 F ATP-dependent peptidase activity
GO:0004222 F metalloendopeptidase activity
GO:0005524 F ATP binding
GO:0005743 C mitochondrial inner membrane
GO:0006508 P proteolysis
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0007005 P mitochondrion organization
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
1914 O_BomoMG1294_5prime_partial:A_BomoMG_comp20133_c0_seq1
994bp
 PREDICTED:_uncharacterized_protein_LOC106135296_[Amyelois_transitella]
1915 O_BomoMG12950_complete:A_BomoMG_comp39331_c2_seq7
508bp
GO:0000166 F nucleotide binding
GO:0004176 F ATP-dependent peptidase activity
GO:0004222 F metalloendopeptidase activity
GO:0005524 F ATP binding
GO:0005743 C mitochondrial inner membrane
GO:0006508 P proteolysis
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0007005 P mitochondrion organization
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
1916 O_BomoMG12952_complete:A_BomoMG_comp39332_c0_seq1
492bp
GO:0003756 F protein disulfide isomerase activity
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0005925 C focal adhesion
GO:0006457 P protein folding
GO:0008152 P metabolic process
GO:0009986 C cell surface
GO:0016853 F isomerase activity
GO:0034976 P response to endoplasmic reticulum stress
GO:0042470 C melanosome
GO:0043209 C myelin sheath
GO:0044822 F RNA binding
GO:0045454 P cell redox homeostasis
GO:0070062 C extracellular exosome
GO:2001238 P positive regulation of extrinsic apoptotic signaling pathway
1917 O_BomoMG12956_3prime_partial:A_BomoMG_comp39333_c0_seq1
1216bp
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010499 P proteasomal ubiquitin-independent protein catabolic process
GO:0010952 P positive regulation of peptidase activity
GO:0016504 F peptidase activator activity
GO:0016607 C nuclear speck
GO:0035093 P spermatogenesis, exchange of chromosomal proteins
GO:0070577 F lysine-acetylated histone binding
GO:1990111 C spermatoproteasome complex
1918 O_BomoMG12960_5prime_partial:A_BomoMG_comp39334_c0_seq1
436bp
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0007219 P Notch signaling pathway
1919 O_BomoMG12961_complete:A_BomoMG_comp39334_c0_seq1
208bp
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0007275 P multicellular organism development
GO:0016568 P chromatin organization
GO:0022008 P neurogenesis
GO:0032040 C small-subunit processome
1920 O_BomoMG12962_complete:A_BomoMG_comp39334_c0_seq1
194bp
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0007275 P multicellular organism development
GO:0016568 P chromatin organization
GO:0022008 P neurogenesis
GO:0032040 C small-subunit processome
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