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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1741 O_BomoMG1267_complete:A_BomoMG_comp20106_c0_seq1
774bp
 PREDICTED:_protein_transport_protein_Sec23A_isoform_X1_[Papilio_machaon]
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0008270 F zinc ion binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030127 C COPII vesicle coat
GO:0030134 C COPII-coated ER to Golgi transport vesicle
GO:0030868 C smooth endoplasmic reticulum membrane
GO:0048471 C perinuclear region of cytoplasm
1742 O_BomoMG12680_5prime_partial:A_BomoMG_comp39235_c1_seq2
211bp
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005925 C focal adhesion
GO:0006909 P phagocytosis
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007155 P cell adhesion
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0048812 P neuron projection morphogenesis
GO:0051015 F actin filament binding
1743 O_BomoMG12682_3prime_partial:A_BomoMG_comp39237_c0_seq2
199bp
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0070062 C extracellular exosome
1744 O_BomoMG12684_complete:A_BomoMG_comp39238_c1_seq1
236bp
GO:0000989 F obsolete transcription factor activity, transcription factor binding
GO:0005634 C nucleus
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008150 P biological_process
GO:0030274 F LIM domain binding
1745 O_BomoMG12685_complete:A_BomoMG_comp39238_c1_seq2
375bp
GO:0000989 F obsolete transcription factor activity, transcription factor binding
GO:0005634 C nucleus
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008150 P biological_process
GO:0030274 F LIM domain binding
1746 O_BomoMG12688_5prime_partial:A_BomoMG_comp39239_c0_seq1
105bp
1747 O_BomoMG12690_complete:A_BomoMG_comp39240_c1_seq1
118bp
GO:0005096 F GTPase activator activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005802 C trans-Golgi network
GO:0005881 C cytoplasmic microtubule
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0006355 P regulation of transcription, DNA-templated
GO:0008013 F beta-catenin binding
GO:0008219 P cell death
GO:0009950 P dorsal/ventral axis specification
GO:0009968 P negative regulation of signal transduction
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0019901 F protein kinase binding
GO:0030154 P cell differentiation
GO:0030877 C beta-catenin destruction complex
GO:0035412 P regulation of canonical Wnt signaling pathway
GO:0043547 P positive regulation of GTPase activity
GO:0070016 F armadillo repeat domain binding
GO:0071407 P cellular response to organic cyclic compound
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0090244 P Wnt signaling pathway involved in somitogenesis
1748 O_BomoMG12692_5prime_partial:A_BomoMG_comp39240_c1_seq4
175bp
GO:0005096 F GTPase activator activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005802 C trans-Golgi network
GO:0005881 C cytoplasmic microtubule
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0006355 P regulation of transcription, DNA-templated
GO:0008013 F beta-catenin binding
GO:0008219 P cell death
GO:0009950 P dorsal/ventral axis specification
GO:0009968 P negative regulation of signal transduction
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0019901 F protein kinase binding
GO:0030154 P cell differentiation
GO:0030877 C beta-catenin destruction complex
GO:0035412 P regulation of canonical Wnt signaling pathway
GO:0043547 P positive regulation of GTPase activity
GO:0070016 F armadillo repeat domain binding
GO:0071407 P cellular response to organic cyclic compound
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0090244 P Wnt signaling pathway involved in somitogenesis
1749 O_BomoMG12695_complete:A_BomoMG_comp39240_c1_seq6
120bp
GO:0005096 F GTPase activator activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005802 C trans-Golgi network
GO:0005881 C cytoplasmic microtubule
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0006355 P regulation of transcription, DNA-templated
GO:0008013 F beta-catenin binding
GO:0008219 P cell death
GO:0009950 P dorsal/ventral axis specification
GO:0009968 P negative regulation of signal transduction
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0019901 F protein kinase binding
GO:0030154 P cell differentiation
GO:0030877 C beta-catenin destruction complex
GO:0035412 P regulation of canonical Wnt signaling pathway
GO:0043547 P positive regulation of GTPase activity
GO:0070016 F armadillo repeat domain binding
GO:0071407 P cellular response to organic cyclic compound
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0090244 P Wnt signaling pathway involved in somitogenesis
1750 O_BomoMG12697_complete:A_BomoMG_comp39240_c1_seq8
118bp
GO:0005096 F GTPase activator activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005802 C trans-Golgi network
GO:0005881 C cytoplasmic microtubule
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0006355 P regulation of transcription, DNA-templated
GO:0008013 F beta-catenin binding
GO:0008219 P cell death
GO:0009950 P dorsal/ventral axis specification
GO:0009968 P negative regulation of signal transduction
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0019901 F protein kinase binding
GO:0030154 P cell differentiation
GO:0030877 C beta-catenin destruction complex
GO:0035412 P regulation of canonical Wnt signaling pathway
GO:0043547 P positive regulation of GTPase activity
GO:0070016 F armadillo repeat domain binding
GO:0071407 P cellular response to organic cyclic compound
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0090244 P Wnt signaling pathway involved in somitogenesis
1751 O_BomoMG12698_complete:A_BomoMG_comp39241_c0_seq1
481bp
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008180 C COP9 signalosome
GO:0010387 P COP9 signalosome assembly
GO:0010388 P protein deneddylation
1752 O_BomoMG12699_complete:A_BomoMG_comp39242_c0_seq1
586bp
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008360 P regulation of cell shape
GO:0030833 P regulation of actin filament polymerization
GO:0032956 P regulation of actin cytoskeleton organization
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:2000145 P regulation of cell motility
1753 O_BomoMG126_internal:A_BomoMG_comp17263_c1_seq1
139bp
 PREDICTED:_uncharacterized_protein_LOC101745877_isoform_X3_[Bombyx_mori]
1754 O_BomoMG12701_complete:A_BomoMG_comp39243_c0_seq2
376bp
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0008528 F G protein-coupled peptide receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0045434 P negative regulation of female receptivity, post-mating
GO:0048042 P regulation of oviposition
1755 O_BomoMG12702_complete:A_BomoMG_comp39243_c0_seq3
376bp
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0008528 F G protein-coupled peptide receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0045434 P negative regulation of female receptivity, post-mating
GO:0048042 P regulation of oviposition
1756 O_BomoMG12703_5prime_partial:A_BomoMG_comp39244_c1_seq2
111bp
GO:0002020 F protease binding
GO:0005739 C mitochondrion
GO:0005740 C mitochondrial envelope
GO:0005741 C mitochondrial outer membrane
GO:0006915 P apoptotic process
GO:0008340 P determination of adult lifespan
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031966 C mitochondrial membrane
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0043067 P regulation of programmed cell death
GO:0051726 P regulation of cell cycle
GO:0097345 P mitochondrial outer membrane permeabilization
1757 O_BomoMG12707_5prime_partial:A_BomoMG_comp39249_c0_seq4
167bp
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0031410 C cytoplasmic vesicle
1758 O_BomoMG12708_complete:A_BomoMG_comp39250_c0_seq1
409bp
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
1759 O_BomoMG12709_5prime_partial:A_BomoMG_comp39252_c0_seq1
107bp
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0008152 P metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0017111 F nucleoside-triphosphatase activity
GO:0098519 F nucleotide phosphatase activity, acting on free nucleotides
1760 O_BomoMG12710_5prime_partial:A_BomoMG_comp39252_c0_seq2
200bp
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0008152 P metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0017111 F nucleoside-triphosphatase activity
GO:0098519 F nucleotide phosphatase activity, acting on free nucleotides
1761 O_BomoMG12712_complete:A_BomoMG_comp39253_c0_seq1
260bp
GO:0000794 C condensed nuclear chromosome
GO:0000961 P negative regulation of mitochondrial RNA catabolic process
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005637 C nuclear inner membrane
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0016020 C membrane
GO:0030529 C ribonucleoprotein complex
GO:0031625 F ubiquitin protein ligase binding
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048487 F beta-tubulin binding
GO:0051015 F actin filament binding
GO:0051028 P mRNA transport
GO:0070129 P regulation of mitochondrial translation
1762 O_BomoMG12713_5prime_partial:A_BomoMG_comp39253_c0_seq1
119bp
1763 O_BomoMG12714_complete:A_BomoMG_comp39253_c0_seq2
1055bp
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
1764 O_BomoMG12715_internal:A_BomoMG_comp39254_c1_seq1
458bp
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006897 P endocytosis
GO:0007275 P multicellular organism development
GO:0007349 P cellularization
GO:0007601 P visual perception
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008354 P germ cell migration
GO:0008583 P mystery cell differentiation
GO:0009950 P dorsal/ventral axis specification
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0035192 P nuclear cortical migration
GO:0036459 F thiol-dependent deubiquitinase
GO:0045824 P negative regulation of innate immune response
GO:0045861 P negative regulation of proteolysis
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0050896 P response to stimulus
1765 O_BomoMG12716_internal:A_BomoMG_comp39254_c1_seq2
517bp
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006897 P endocytosis
GO:0007275 P multicellular organism development
GO:0007349 P cellularization
GO:0007601 P visual perception
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008354 P germ cell migration
GO:0008583 P mystery cell differentiation
GO:0009950 P dorsal/ventral axis specification
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0035192 P nuclear cortical migration
GO:0036459 F thiol-dependent deubiquitinase
GO:0045824 P negative regulation of innate immune response
GO:0045861 P negative regulation of proteolysis
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0050896 P response to stimulus
1766 O_BomoMG12717_internal:A_BomoMG_comp39254_c2_seq1
292bp
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006897 P endocytosis
GO:0007275 P multicellular organism development
GO:0007349 P cellularization
GO:0007601 P visual perception
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008354 P germ cell migration
GO:0008583 P mystery cell differentiation
GO:0009950 P dorsal/ventral axis specification
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0035192 P nuclear cortical migration
GO:0036459 F thiol-dependent deubiquitinase
GO:0045824 P negative regulation of innate immune response
GO:0045861 P negative regulation of proteolysis
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0050896 P response to stimulus
1767 O_BomoMG12718_5prime_partial:A_BomoMG_comp39255_c0_seq1
158bp
1768 O_BomoMG12719_internal:A_BomoMG_comp39255_c0_seq2
824bp
GO:0005216 F ion channel activity
GO:0005261 F cation channel activity
GO:0005262 F calcium channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006816 P calcium ion transport
GO:0009408 P response to heat
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034220 P ion transmembrane transport
GO:0034703 C cation channel complex
GO:0048060 P negative gravitaxis
GO:0050896 P response to stimulus
GO:0051290 P protein heterotetramerization
GO:0055085 P transmembrane transport
GO:0070588 P calcium ion transmembrane transport
GO:0098655 P cation transmembrane transport
1769 O_BomoMG1271_complete:A_BomoMG_comp20109_c0_seq1
139bp
 PREDICTED:_protein_lethal(2)essential_for_life-like_isoform_X2_[Amyelois_transitella]
GO:0005212 F structural constituent of eye lens
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
1770 O_BomoMG12720_5prime_partial:A_BomoMG_comp39256_c0_seq1
713bp
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007405 P neuroblast proliferation
GO:0007417 P central nervous system development
GO:0007422 P peripheral nervous system development
GO:0007438 P oenocyte development
GO:0007443 P Malpighian tubule morphogenesis
GO:0008347 P glial cell migration
GO:0008366 P axon ensheathment
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0044822 F RNA binding
GO:0048663 P neuron fate commitment
GO:0051298 P centrosome duplication
GO:0071010 C prespliceosome
GO:0071011 C precatalytic spliceosome
GO:0071012 C catalytic step 1 spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0071014 C post-mRNA release spliceosomal complex
GO:0072686 C mitotic spindle
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