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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
151 O_BomoMG10248_internal:A_BomoMG_comp38090_c2_seq1
137bp
 PREDICTED:_adenylosuccinate_lyase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004018 F N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
GO:0005829 C cytosol
GO:0006164 P purine nucleotide biosynthetic process
GO:0006167 P AMP biosynthetic process
GO:0006189 P 'de novo' IMP biosynthetic process
GO:0009152 P purine ribonucleotide biosynthetic process
GO:0009168 P purine ribonucleoside monophosphate biosynthetic process
GO:0016829 F lyase activity
GO:0044208 P 'de novo' AMP biosynthetic process
GO:0051262 P protein tetramerization
GO:0070626 F (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity
152 O_BomoMG10249_complete:A_BomoMG_comp38093_c0_seq1
253bp
 PREDICTED:_cytochrome_c-type_heme_lyase_isoform_X1_[Amyelois_transitella]
GO:0004408 F holocytochrome-c synthase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016829 F lyase activity
GO:0046872 F metal ion binding
153 O_BomoMG10250_complete:A_BomoMG_comp38093_c0_seq2
253bp
 PREDICTED:_cytochrome_c-type_heme_lyase_isoform_X1_[Amyelois_transitella]
GO:0004408 F holocytochrome-c synthase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016829 F lyase activity
GO:0046872 F metal ion binding
154 O_BomoMG10253_3prime_partial:A_BomoMG_comp38096_c0_seq1
288bp
 Uncharacterized_protein_OBRU01_01001,_partial_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
155 O_BomoMG10254_internal:A_BomoMG_comp38097_c0_seq1
265bp
 PREDICTED:_protein_transport_protein_Sec24A_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0008270 F zinc ion binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030127 C COPII vesicle coat
GO:0045714 P obsolete regulation of low-density lipoprotein particle receptor biosynthetic process
GO:0048471 C perinuclear region of cytoplasm
GO:0050714 P positive regulation of protein secretion
GO:2000189 P cholesterol homeostasis
156 O_BomoMG10256_internal:A_BomoMG_comp38098_c0_seq1
111bp
 PREDICTED:_zinc_finger_protein_basonuclin-2-like_[Bombyx_mori]
157 O_BomoMG10257_3prime_partial:A_BomoMG_comp38101_c0_seq1
265bp
 putative_splicing_factor_pTSR1_[Danaus_plexippus]
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
158 O_BomoMG10258_3prime_partial:A_BomoMG_comp38101_c0_seq2
118bp
 putative_splicing_factor_pTSR1_[Danaus_plexippus]
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
159 O_BomoMG10259_3prime_partial:A_BomoMG_comp38101_c0_seq3
212bp
 putative_splicing_factor_pTSR1_[Danaus_plexippus]
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
160 O_BomoMG1025_5prime_partial:A_BomoMG_comp19732_c0_seq1
250bp
 Breast_cancer_type_2_susceptibility_protein-like_[Papilio_xuthus]
161 O_BomoMG10260_3prime_partial:A_BomoMG_comp38101_c0_seq4
212bp
 putative_splicing_factor_pTSR1_[Danaus_plexippus]
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
162 O_BomoMG10261_3prime_partial:A_BomoMG_comp38101_c0_seq5
118bp
 putative_splicing_factor_pTSR1_[Danaus_plexippus]
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
163 O_BomoMG10262_3prime_partial:A_BomoMG_comp38101_c0_seq6
118bp
 putative_splicing_factor_pTSR1_[Danaus_plexippus]
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
164 O_BomoMG10263_5prime_partial:A_BomoMG_comp38102_c0_seq1
323bp
 PREDICTED:_protein_CLP1_homolog_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005849 C mRNA cleavage factor complex
GO:0006397 P mRNA processing
GO:0031124 P mRNA 3'-end processing
165 O_BomoMG10264_5prime_partial:A_BomoMG_comp38102_c0_seq2
345bp
 PREDICTED:_protein_CLP1_homolog_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005849 C mRNA cleavage factor complex
GO:0006397 P mRNA processing
GO:0031124 P mRNA 3'-end processing
166 O_BomoMG10266_3prime_partial:A_BomoMG_comp38103_c0_seq1
129bp
 WD_repeat-containing_protein_75_[Papilio_xuthus]
GO:0005634 C nucleus
GO:0005730 C nucleolus
167 O_BomoMG10267_5prime_partial:A_BomoMG_comp38103_c2_seq1
681bp
 WD_repeat-containing_protein_75_[Papilio_xuthus]
GO:0005634 C nucleus
GO:0005730 C nucleolus
168 O_BomoMG10269_complete:A_BomoMG_comp38104_c0_seq1
467bp
 putative_odorant_response_protein_ODR-4_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
169 O_BomoMG1026_5prime_partial:A_BomoMG_comp19732_c0_seq2
250bp
 Breast_cancer_type_2_susceptibility_protein-like_[Papilio_xuthus]
170 O_BomoMG10270_5prime_partial:A_BomoMG_comp38105_c0_seq1
204bp
 protein_sprouty_[Bombyx_mori]
GO:0001745 P compound eye morphogenesis
GO:0001763 P morphogenesis of a branching structure
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007424 P open tracheal system development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007429 P secondary branching, open tracheal system
GO:0007430 P terminal branching, open tracheal system
GO:0008293 P torso signaling pathway
GO:0008595 P anterior/posterior axis specification, embryo
GO:0009966 P regulation of signal transduction
GO:0009968 P negative regulation of signal transduction
GO:0016020 C membrane
GO:0016318 P ommatidial rotation
GO:0021782 P glial cell development
GO:0030707 P ovarian follicle cell development
GO:0035155 P negative regulation of terminal cell fate specification, open tracheal system
GO:0040037 P negative regulation of fibroblast growth factor receptor signaling pathway
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0045314 P regulation of compound eye photoreceptor development
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0048747 P muscle cell development
GO:0060446 P branching involved in open tracheal system development
171 O_BomoMG10271_complete:A_BomoMG_comp38106_c1_seq1
227bp
 N-acetyl-glucosamine-6-phosphate_isomerase_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005777 C peroxisome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0009306 P protein secretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019233 P sensory perception of pain
172 O_BomoMG10272_complete:A_BomoMG_comp38106_c1_seq2
227bp
 N-acetyl-glucosamine-6-phosphate_isomerase_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005777 C peroxisome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0009306 P protein secretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019233 P sensory perception of pain
173 O_BomoMG10273_complete:A_BomoMG_comp38107_c0_seq1
137bp
 PREDICTED:_uncharacterized_protein_LOC101746409_isoform_X2_[Bombyx_mori]
174 O_BomoMG10274_internal:A_BomoMG_comp38109_c0_seq1
109bp
 PREDICTED:_E3_ubiquitin-protein_ligase_MYCBP2-like_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007616 P long-term memory
GO:0007628 P adult walking behavior
GO:0008270 F zinc ion binding
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0016023 C cytoplasmic vesicle
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030509 P BMP signaling pathway
GO:0030514 P negative regulation of BMP signaling pathway
GO:0040011 P locomotion
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0046872 F metal ion binding
GO:0048678 P response to axon injury
GO:0050808 P synapse organization
GO:2000331 P regulation of terminal button organization
175 O_BomoMG10275_internal:A_BomoMG_comp38109_c2_seq1
150bp
 PREDICTED:_E3_ubiquitin-protein_ligase_MYCBP2-like_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
176 O_BomoMG10276_5prime_partial:A_BomoMG_comp38110_c0_seq1
659bp
 PREDICTED:_uncharacterized_protein_LOC101739643_isoform_X2_[Bombyx_mori]
177 O_BomoMG10278_5prime_partial:A_BomoMG_comp38110_c0_seq2
659bp
 PREDICTED:_uncharacterized_protein_LOC101739643_isoform_X2_[Bombyx_mori]
178 O_BomoMG10280_3prime_partial:A_BomoMG_comp38110_c1_seq1
258bp
 PREDICTED:_uncharacterized_protein_LOC101739643_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0000792 C heterochromatin
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005721 C pericentric heterochromatin
GO:0006281 P DNA repair
GO:0006334 P nucleosome assembly
GO:0006336 P DNA replication-independent chromatin assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007283 P spermatogenesis
GO:0010571 P positive regulation of nuclear cell cycle DNA replication
GO:0015616 F DNA translocase activity
GO:0016568 P chromatin organization
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0030330 P DNA damage response, signal transduction by p53 class mediator
GO:0030900 P forebrain development
GO:0031297 P replication fork processing
GO:0031933 C obsolete telomeric heterochromatin
GO:0032206 P positive regulation of telomere maintenance
GO:0035064 F methylated histone binding
GO:0035128 P post-embryonic forelimb morphogenesis
GO:0035264 P multicellular organism growth
GO:0042393 F histone binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0060009 P Sertoli cell development
GO:0070087 F chromo shadow domain binding
GO:0070198 P protein localization to chromosome, telomeric region
GO:0070603 C SWI/SNF superfamily-type complex
GO:0072520 P seminiferous tubule development
GO:0072711 P cellular response to hydroxyurea
GO:1901581 P negative regulation of telomeric RNA transcription from RNA pol II promoter
GO:1901582 P positive regulation of telomeric RNA transcription from RNA pol II promoter
GO:1904908 P negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric
GO:1990707 C chromosome, subtelomeric region
179 O_BomoMG10281_3prime_partial:A_BomoMG_comp38111_c0_seq1
584bp
 PREDICTED:_tau-tubulin_kinase_1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006468 P protein phosphorylation
GO:0007224 P smoothened signaling pathway
GO:0008360 P regulation of cell shape
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0030030 P cell projection organization
GO:0035869 C ciliary transition zone
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042995 C cell projection
180 O_BomoMG10284_complete:A_BomoMG_comp38112_c0_seq1
233bp
 PREDICTED:_CXXC-type_zinc_finger_protein_1_[Papilio_xuthus]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0048188 C Set1C/COMPASS complex
GO:0051568 P histone H3-K4 methylation
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