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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
961 O_BomoFB10866_complete:A_BomoFB_comp9905_c1_seq5
200bp
 hypothetical_protein_[Streptomyces_purpeofuscus]
962 O_BomoFB10867_complete:A_BomoFB_comp9905_c1_seq5
193bp
 hypothetical_protein_[Streptomyces_griseolus]
963 O_BomoFB10868_complete:A_BomoFB_comp9905_c1_seq7
104bp
 hypothetical_protein_P857_886_[Candidatus_Xenolissoclinum_pacificiensis_L6]
964 O_BomoFB10869_complete:A_BomoFB_comp9905_c1_seq8
680bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_ATP-dependent_RNA_helicase_Ddx1-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003676 F nucleic acid binding
GO:0003682 F chromatin binding
GO:0003712 F transcription coregulator activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006302 P double-strand break repair
GO:0007283 P spermatogenesis
GO:0008026 F helicase activity
GO:0008143 F poly(A) binding
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0033677 F DNA/RNA helicase activity
GO:0042254 P ribosome biogenesis
GO:0048477 P oogenesis
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:1903506 P regulation of nucleic acid-templated transcription
965 O_BomoFB1086_complete:A_BomoFB_comp2875_c0_seq2
335bp
 PREDICTED:_putative_transferase_CAF17_homolog,_mitochondrial_[Papilio_machaon]
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006783 P heme biosynthetic process
GO:0016226 P iron-sulfur cluster assembly
GO:0016740 F transferase activity
966 O_BomoFB10870_complete:A_BomoFB_comp9905_c1_seq8
200bp
 hypothetical_protein_[Streptomyces_purpeofuscus]
967 O_BomoFB10871_complete:A_BomoFB_comp9905_c1_seq8
193bp
 hypothetical_protein_[Streptomyces_griseolus]
968 O_BomoFB10872_internal:A_BomoFB_comp9906_c1_seq1
622bp
 PREDICTED:_protein_PTCD3_homolog,_mitochondrial_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0006417 P regulation of translation
GO:0008150 P biological_process
GO:0019843 F rRNA binding
GO:0032543 P mitochondrial translation
GO:0043024 F ribosomal small subunit binding
969 O_BomoFB10873_internal:A_BomoFB_comp9906_c1_seq2
586bp
 PREDICTED:_protein_PTCD3_homolog,_mitochondrial_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0006417 P regulation of translation
GO:0008150 P biological_process
GO:0019843 F rRNA binding
GO:0032543 P mitochondrial translation
GO:0043024 F ribosomal small subunit binding
970 O_BomoFB10874_5prime_partial:A_BomoFB_comp9906_c1_seq2
109bp
971 O_BomoFB10875_5prime_partial:A_BomoFB_comp9907_c1_seq1
1638bp
 PREDICTED:_uncharacterized_protein_LOC101739006_isoform_X2_[Bombyx_mori]
972 O_BomoFB10876_complete:A_BomoFB_comp9907_c1_seq1
181bp
 oligosaccharyl_transferase,_archaeosortase_A_system-associated_[Halorhabdus_tiamatea]
973 O_BomoFB10877_complete:A_BomoFB_comp9907_c1_seq1
178bp
 transporter,_partial_[Streptomyces_pluripotens]
974 O_BomoFB10878_5prime_partial:A_BomoFB_comp9907_c1_seq1
132bp
 PREDICTED:_hepatocyte_growth_factor_activator_isoform_X1_[Jaculus_jaculus]
975 O_BomoFB10879_5prime_partial:A_BomoFB_comp9907_c1_seq1
117bp
 NADH_dehydrogenase_subunit_5,_partial_(mitochondrion)_[Mytilus_californianus]
976 O_BomoFB1087_3prime_partial:A_BomoFB_comp2875_c0_seq2
111bp
 PREDICTED:_cysteine-rich_DPF_motif_domain-containing_protein_1-like_isoform_X2_[Papilio_xuthus]
977 O_BomoFB10880_complete:A_BomoFB_comp9908_c0_seq1
698bp
 PREDICTED:_ral_guanine_nucleotide_dissociation_stimulator_isoform_X1_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005829 C cytosol
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008321 F guanyl-nucleotide exchange factor activity
GO:0043547 P positive regulation of GTPase activity
978 O_BomoFB10881_complete:A_BomoFB_comp9908_c0_seq1
101bp
 PREDICTED:_chromodomain-helicase-DNA-binding_protein_Mi-2_homolog_[Bactrocera_oleae]
979 O_BomoFB10882_complete:A_BomoFB_comp9908_c0_seq2
749bp
 PREDICTED:_ral_guanine_nucleotide_dissociation_stimulator_isoform_X1_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005829 C cytosol
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008321 F guanyl-nucleotide exchange factor activity
GO:0043547 P positive regulation of GTPase activity
980 O_BomoFB10883_complete:A_BomoFB_comp9908_c0_seq2
101bp
 PREDICTED:_chromodomain-helicase-DNA-binding_protein_Mi-2_homolog_[Bactrocera_oleae]
981 O_BomoFB10884_complete:A_BomoFB_comp9909_c0_seq1
248bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
982 O_BomoFB10885_complete:A_BomoFB_comp9909_c0_seq2
112bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
983 O_BomoFB10886_complete:A_BomoFB_comp9910_c0_seq1
527bp
 PREDICTED:_src_substrate_cortactin_isoform_X1_[Papilio_polytes]
GO:0001726 C ruffle
GO:0002102 C podosome
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0005925 C focal adhesion
GO:0005938 C cell cortex
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007420 P brain development
GO:0008076 C voltage-gated potassium channel complex
GO:0016020 C membrane
GO:0030027 C lamellipodium
GO:0030041 P actin filament polymerization
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0030516 P regulation of axon extension
GO:0030838 P positive regulation of actin filament polymerization
GO:0030863 C cortical cytoskeleton
GO:0031532 P actin cytoskeleton reorganization
GO:0042995 C cell projection
GO:0043197 C dendritic spine
GO:0048041 P focal adhesion assembly
GO:0048812 P neuron projection morphogenesis
GO:0048870 P cell motility
GO:0070064 F proline-rich region binding
GO:0097581 P lamellipodium organization
984 O_BomoFB10887_complete:A_BomoFB_comp9910_c0_seq1
161bp
985 O_BomoFB10888_complete:A_BomoFB_comp9910_c0_seq1
125bp
 glutamine_amidotransferase_[Sphingomonas_sp._PAMC_26621]
986 O_BomoFB10889_5prime_partial:A_BomoFB_comp9911_c0_seq1
234bp
 Ubiquitin_carboxyl-terminal_hydrolase_5_[Papilio_xuthus]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008242 F omega peptidase activity
GO:0008270 F zinc ion binding
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0036459 F thiol-dependent deubiquitinase
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0071108 P protein K48-linked deubiquitination
987 O_BomoFB1088_complete:A_BomoFB_comp2878_c0_seq1
325bp
 hypothetical_protein_KGM_18963_[Danaus_plexippus]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
988 O_BomoFB10890_complete:A_BomoFB_comp9911_c0_seq1
150bp
 hypothetical_protein_[Rhizobium_mongolense]
989 O_BomoFB10891_complete:A_BomoFB_comp9911_c0_seq2
802bp
 Ubiquitin_carboxyl-terminal_hydrolase_5_[Papilio_xuthus]
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008242 F omega peptidase activity
GO:0008270 F zinc ion binding
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0036459 F thiol-dependent deubiquitinase
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0071108 P protein K48-linked deubiquitination
990 O_BomoFB10892_complete:A_BomoFB_comp9911_c0_seq2
150bp
 hypothetical_protein_[Rhizobium_mongolense]
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