SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/25536
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
511 O_BomoFB10460_internal:A_BomoFB_comp9791_c1_seq1
159bp
 PREDICTED:_uncharacterized_protein_LOC106720599_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0008150 P biological_process
512 O_BomoFB10461_complete:A_BomoFB_comp9792_c0_seq1
489bp
 PREDICTED:_target_of_Myb_protein_1_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007165 P signal transduction
GO:0015031 P protein transport
GO:0019901 F protein kinase binding
GO:0030276 F clathrin binding
GO:0045839 P negative regulation of mitotic nuclear division
GO:0070062 C extracellular exosome
513 O_BomoFB10462_complete:A_BomoFB_comp9792_c0_seq1
113bp
514 O_BomoFB10463_complete:A_BomoFB_comp9792_c0_seq1
112bp
 fumarate_reductase_[Desulfatitalea_sp._BRH_c12]
515 O_BomoFB10464_complete:A_BomoFB_comp9793_c0_seq1
398bp
 PREDICTED:_BTB/POZ_domain-containing_protein_KCTD9_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0051260 P protein homooligomerization
516 O_BomoFB10465_3prime_partial:A_BomoFB_comp9795_c0_seq1
592bp
 PREDICTED:_glycosylphosphatidylinositol_anchor_attachment_1_protein_isoform_X1_[Amyelois_transitella]
GO:0003923 F GPI-anchor transamidase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005887 C integral component of plasma membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016255 P attachment of GPI anchor to protein
GO:0034235 F GPI anchor binding
GO:0042765 C GPI-anchor transamidase complex
517 O_BomoFB10466_complete:A_BomoFB_comp9796_c0_seq1
283bp
 PREDICTED:_dnaJ_(Hsp40)_homolog_4_isoform_X1_[Bombyx_mori]
GO:0001669 C acrosomal vesicle
GO:0005515 F protein binding
GO:0005813 C centrosome
GO:0008150 P biological_process
518 O_BomoFB10467_complete:A_BomoFB_comp9796_c0_seq2
237bp
 DnaJ_(Hsp40)_homolog_4_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0030018 C Z disc
GO:0048471 C perinuclear region of cytoplasm
519 O_BomoFB10468_complete:A_BomoFB_comp9796_c0_seq3
283bp
 PREDICTED:_dnaJ_(Hsp40)_homolog_4_isoform_X1_[Bombyx_mori]
GO:0001669 C acrosomal vesicle
GO:0005515 F protein binding
GO:0005813 C centrosome
GO:0008150 P biological_process
520 O_BomoFB10469_complete:A_BomoFB_comp9796_c0_seq4
237bp
 DnaJ_(Hsp40)_homolog_4_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0030018 C Z disc
GO:0048471 C perinuclear region of cytoplasm
521 O_BomoFB1046_complete:A_BomoFB_comp2842_c0_seq2
357bp
 hypothetical_protein_KGM_11112_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0004594 F pantothenate kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0015937 P coenzyme A biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
522 O_BomoFB10470_5prime_partial:A_BomoFB_comp9798_c0_seq1
772bp
 PREDICTED:_prolyl_endopeptidase_isoform_X2_[Papilio_xuthus]
GO:0004252 F serine-type endopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0019538 P protein metabolic process
GO:0070008 F serine-type exopeptidase activity
523 O_BomoFB10471_3prime_partial:A_BomoFB_comp9799_c0_seq1
727bp
 PREDICTED:_actin-binding_LIM_protein_3_isoform_X3_[Plutella_xylostella]
GO:0001725 C stress fiber
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007010 P cytoskeleton organization
GO:0007601 P visual perception
GO:0008270 F zinc ion binding
GO:0009887 P animal organ morphogenesis
GO:0015629 C actin cytoskeleton
GO:0030027 C lamellipodium
GO:0030032 P lamellipodium assembly
GO:0042384 P cilium assembly
GO:0046872 F metal ion binding
524 O_BomoFB10472_complete:A_BomoFB_comp9799_c0_seq1
124bp
525 O_BomoFB10473_complete:A_BomoFB_comp9799_c0_seq1
115bp
 hypothetical_protein_PDE_09297_[Penicillium_oxalicum_114-2]
526 O_BomoFB10474_3prime_partial:A_BomoFB_comp9799_c0_seq2
660bp
 PREDICTED:_actin-binding_LIM_protein_3_isoform_X3_[Plutella_xylostella]
GO:0001725 C stress fiber
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007010 P cytoskeleton organization
GO:0007601 P visual perception
GO:0008270 F zinc ion binding
GO:0009887 P animal organ morphogenesis
GO:0015629 C actin cytoskeleton
GO:0030027 C lamellipodium
GO:0030032 P lamellipodium assembly
GO:0042384 P cilium assembly
GO:0046872 F metal ion binding
527 O_BomoFB10475_complete:A_BomoFB_comp9799_c0_seq2
124bp
528 O_BomoFB10476_complete:A_BomoFB_comp9799_c0_seq2
115bp
 hypothetical_protein_PDE_09297_[Penicillium_oxalicum_114-2]
529 O_BomoFB10477_complete:A_BomoFB_comp9800_c0_seq1
451bp
 PREDICTED:_protein_hu-li_tai_shao_[Bombyx_mori]
GO:0000212 P meiotic spindle organization
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0007294 P germarium-derived oocyte fate determination
GO:0007411 P axon guidance
GO:0007527 P adult somatic muscle development
GO:0008302 P female germline ring canal formation, actin assembly
GO:0016020 C membrane
GO:0016328 C lateral plasma membrane
GO:0030154 P cell differentiation
GO:0030721 P spectrosome organization
GO:0030723 P ovarian fusome organization
GO:0030724 P testicular fusome organization
GO:0031987 P locomotion involved in locomotory behavior
GO:0035183 C female germline ring canal inner rim
GO:0045169 C fusome
GO:0045170 C spectrosome
GO:0045172 C germline ring canal
GO:0045214 P sarcomere organization
GO:0045478 P fusome organization
GO:0048134 P germ-line cyst formation
GO:0048135 P female germ-line cyst formation
GO:0048477 P oogenesis
GO:0051297 P centrosome cycle
GO:0061572 P actin filament bundle organization
GO:0070050 P neuron cellular homeostasis
GO:0072499 P photoreceptor cell axon guidance
530 O_BomoFB10478_complete:A_BomoFB_comp9800_c0_seq1
183bp
 PREDICTED:_rab_GTPase-activating_protein_1-like_isoform_X1_[Alligator_mississippiensis]
531 O_BomoFB10479_complete:A_BomoFB_comp9800_c0_seq2
727bp
 PREDICTED:_protein_hu-li_tai_shao_[Bombyx_mori]
GO:0000212 P meiotic spindle organization
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0007294 P germarium-derived oocyte fate determination
GO:0007411 P axon guidance
GO:0007527 P adult somatic muscle development
GO:0008302 P female germline ring canal formation, actin assembly
GO:0016020 C membrane
GO:0016328 C lateral plasma membrane
GO:0030154 P cell differentiation
GO:0030721 P spectrosome organization
GO:0030723 P ovarian fusome organization
GO:0030724 P testicular fusome organization
GO:0031987 P locomotion involved in locomotory behavior
GO:0035183 C female germline ring canal inner rim
GO:0045169 C fusome
GO:0045170 C spectrosome
GO:0045172 C germline ring canal
GO:0045214 P sarcomere organization
GO:0045478 P fusome organization
GO:0048134 P germ-line cyst formation
GO:0048135 P female germ-line cyst formation
GO:0048477 P oogenesis
GO:0051297 P centrosome cycle
GO:0061572 P actin filament bundle organization
GO:0070050 P neuron cellular homeostasis
GO:0072499 P photoreceptor cell axon guidance
532 O_BomoFB1047_3prime_partial:A_BomoFB_comp2845_c0_seq1
234bp
 Nep1_protein_[Bombyx_mori]
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0009267 P cellular response to starvation
GO:0016740 F transferase activity
GO:0019843 F rRNA binding
GO:0022008 P neurogenesis
GO:0031167 P rRNA methylation
GO:0032040 C small-subunit processome
GO:0032259 P methylation
GO:0040018 P positive regulation of multicellular organism growth
GO:0042254 P ribosome biogenesis
GO:0042742 P defense response to bacterium
GO:0070037 F rRNA (pseudouridine) methyltransferase activity
GO:0070475 P rRNA base methylation
533 O_BomoFB10480_complete:A_BomoFB_comp9800_c0_seq2
258bp
 flagellar_hook-associated_protein_FlgK_[Porphyrobacter_sp._AAP60]
534 O_BomoFB10481_complete:A_BomoFB_comp9800_c0_seq2
183bp
 PREDICTED:_rab_GTPase-activating_protein_1-like_isoform_X1_[Alligator_mississippiensis]
535 O_BomoFB10482_complete:A_BomoFB_comp9800_c0_seq3
719bp
 PREDICTED:_protein_hu-li_tai_shao_[Bombyx_mori]
GO:0000212 P meiotic spindle organization
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0007294 P germarium-derived oocyte fate determination
GO:0007411 P axon guidance
GO:0007527 P adult somatic muscle development
GO:0008302 P female germline ring canal formation, actin assembly
GO:0016020 C membrane
GO:0016328 C lateral plasma membrane
GO:0030154 P cell differentiation
GO:0030721 P spectrosome organization
GO:0030723 P ovarian fusome organization
GO:0030724 P testicular fusome organization
GO:0031987 P locomotion involved in locomotory behavior
GO:0035183 C female germline ring canal inner rim
GO:0045169 C fusome
GO:0045170 C spectrosome
GO:0045172 C germline ring canal
GO:0045214 P sarcomere organization
GO:0045478 P fusome organization
GO:0048134 P germ-line cyst formation
GO:0048135 P female germ-line cyst formation
GO:0048477 P oogenesis
GO:0051297 P centrosome cycle
GO:0061572 P actin filament bundle organization
GO:0070050 P neuron cellular homeostasis
GO:0072499 P photoreceptor cell axon guidance
536 O_BomoFB10483_complete:A_BomoFB_comp9800_c0_seq3
250bp
 transcriptional_regulator_MntR_[Nisaea_denitrificans]
537 O_BomoFB10484_complete:A_BomoFB_comp9800_c0_seq3
183bp
 PREDICTED:_rab_GTPase-activating_protein_1-like_isoform_X1_[Alligator_mississippiensis]
538 O_BomoFB10485_complete:A_BomoFB_comp9801_c1_seq1
595bp
 PREDICTED:_laccase-2-like_isoform_X1_[Bombyx_mori]
GO:0005507 F copper ion binding
GO:0005576 C extracellular region
GO:0008447 F L-ascorbate oxidase activity
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
539 O_BomoFB10486_complete:A_BomoFB_comp9801_c1_seq2
562bp
 PREDICTED:_laccase-2-like_isoform_X2_[Bombyx_mori]
GO:0005507 F copper ion binding
GO:0005576 C extracellular region
GO:0008447 F L-ascorbate oxidase activity
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
540 O_BomoFB10487_complete:A_BomoFB_comp9802_c0_seq1
605bp
 PREDICTED:_PAB-dependent_poly(A)-specific_ribonuclease_subunit_PAN3_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000932 C P-body
GO:0004672 F protein kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006468 P protein phosphorylation
GO:0010606 P positive regulation of cytoplasmic mRNA processing body assembly
GO:0031251 C PAN complex
GO:0044822 F RNA binding
previous next from show/25536

- SilkBase 1999-2023 -