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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2641 O_BomoFB12378_5prime_partial:A_BomoFB_comp10197_c0_seq1
1256bp
 PREDICTED:_dystrophin,_isoform_B-like_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0007274 P neuromuscular synaptic transmission
GO:0007474 P imaginal disc-derived wing vein specification
GO:0008092 F cytoskeletal protein binding
GO:0008270 F zinc ion binding
GO:0008307 F structural constituent of muscle
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016020 C membrane
GO:0030010 P establishment of cell polarity
GO:0042383 C sarcolemma
GO:0045202 C synapse
GO:0046716 P muscle cell cellular homeostasis
GO:0046872 F metal ion binding
GO:0046928 P regulation of neurotransmitter secretion
GO:0048172 P regulation of short-term neuronal synaptic plasticity
GO:0050699 F WW domain binding
2642 O_BomoFB12379_5prime_partial:A_BomoFB_comp10197_c0_seq1
166bp
2643 O_BomoFB1237_complete:A_BomoFB_comp3009_c0_seq1
976bp
 PREDICTED:_dual_3',5'-cyclic-AMP_and_-GMP_phosphodiesterase_11_isoform_X1_[Bombyx_mori]
GO:0004114 F 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0004115 F 3',5'-cyclic-AMP phosphodiesterase activity
GO:0005575 C cellular_component
GO:0005829 C cytosol
GO:0007165 P signal transduction
GO:0008081 F phosphoric diester hydrolase activity
GO:0016787 F hydrolase activity
GO:0046058 P cAMP metabolic process
GO:0046068 P cGMP metabolic process
GO:0046331 P lateral inhibition
GO:0046872 F metal ion binding
GO:0047555 F 3',5'-cyclic-GMP phosphodiesterase activity
2644 O_BomoFB12380_complete:A_BomoFB_comp10197_c0_seq1
163bp
2645 O_BomoFB12381_3prime_partial:A_BomoFB_comp10197_c0_seq1
147bp
 PREDICTED:_deleted_in_malignant_brain_tumors_1_protein_isoform_X12_[Canis_lupus_familiaris]
2646 O_BomoFB12382_complete:A_BomoFB_comp10197_c0_seq1
127bp
2647 O_BomoFB12383_complete:A_BomoFB_comp10197_c0_seq1
107bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_ABC_transporter_G_family_member_32-like_[Erythranthe_guttata]
2648 O_BomoFB12384_complete:A_BomoFB_comp10198_c0_seq1
207bp
 PREDICTED:_major_facilitator_superfamily_domain-containing_protein_12-like_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2649 O_BomoFB12385_complete:A_BomoFB_comp10198_c0_seq2
405bp
 PREDICTED:_major_facilitator_superfamily_domain-containing_protein_12-like_isoform_X2_[Bombyx_mori]
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2650 O_BomoFB12386_complete:A_BomoFB_comp10198_c0_seq5
467bp
 PREDICTED:_major_facilitator_superfamily_domain-containing_protein_12-like_isoform_X2_[Bombyx_mori]
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2651 O_BomoFB12387_complete:A_BomoFB_comp10198_c0_seq6
467bp
 PREDICTED:_major_facilitator_superfamily_domain-containing_protein_12-like_isoform_X2_[Bombyx_mori]
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2652 O_BomoFB12388_complete:A_BomoFB_comp10198_c0_seq7
405bp
 PREDICTED:_major_facilitator_superfamily_domain-containing_protein_12-like_isoform_X2_[Bombyx_mori]
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2653 O_BomoFB12389_complete:A_BomoFB_comp10198_c0_seq8
145bp
 PREDICTED:_major_facilitator_superfamily_domain-containing_protein_12-like_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2654 O_BomoFB1238_complete:A_BomoFB_comp3009_c0_seq1
196bp
 mitochondrial_genome_maintenance_MGM101_[Dacryopinax_sp._DJM-731_SS1]
2655 O_BomoFB12390_complete:A_BomoFB_comp10199_c0_seq1
942bp
 hypothetical_protein_KGM_19935_[Danaus_plexippus]
GO:0000151 C ubiquitin ligase complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006464 P cellular protein modification process
GO:0007605 P sensory perception of sound
GO:0008270 F zinc ion binding
GO:0016274 F protein-arginine N-methyltransferase activity
GO:0016567 P protein ubiquitination
GO:0035246 P peptidyl-arginine N-methylation
GO:0046872 F metal ion binding
2656 O_BomoFB12391_5prime_partial:A_BomoFB_comp10199_c0_seq2
932bp
 hypothetical_protein_KGM_19935_[Danaus_plexippus]
GO:0000151 C ubiquitin ligase complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006464 P cellular protein modification process
GO:0007605 P sensory perception of sound
GO:0008270 F zinc ion binding
GO:0016274 F protein-arginine N-methyltransferase activity
GO:0016567 P protein ubiquitination
GO:0035246 P peptidyl-arginine N-methylation
GO:0046872 F metal ion binding
2657 O_BomoFB12392_5prime_partial:A_BomoFB_comp10199_c0_seq2
133bp
 hypothetical_protein_BRAFLDRAFT_102024_[Branchiostoma_floridae]
2658 O_BomoFB12393_complete:A_BomoFB_comp10200_c0_seq1
709bp
 PREDICTED:_splicing_factor_3B_subunit_3_isoform_X1_[Amyelois_transitella]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
2659 O_BomoFB12394_complete:A_BomoFB_comp10200_c0_seq1
474bp
 putative_Splicing_factor_3B_subunit_[Danaus_plexippus]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0042177 P negative regulation of protein catabolic process
GO:0071013 C catalytic step 2 spliceosome
2660 O_BomoFB12395_complete:A_BomoFB_comp10200_c0_seq1
109bp
2661 O_BomoFB12396_complete:A_BomoFB_comp10200_c0_seq2
1219bp
 PREDICTED:_splicing_factor_3B_subunit_3_isoform_X1_[Amyelois_transitella]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0042177 P negative regulation of protein catabolic process
GO:0071013 C catalytic step 2 spliceosome
2662 O_BomoFB12397_complete:A_BomoFB_comp10200_c0_seq2
109bp
2663 O_BomoFB12398_complete:A_BomoFB_comp10200_c0_seq3
709bp
 PREDICTED:_splicing_factor_3B_subunit_3_isoform_X1_[Amyelois_transitella]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
2664 O_BomoFB12399_complete:A_BomoFB_comp10200_c0_seq3
474bp
 putative_Splicing_factor_3B_subunit_[Danaus_plexippus]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0042177 P negative regulation of protein catabolic process
GO:0071013 C catalytic step 2 spliceosome
2665 O_BomoFB1239_complete:A_BomoFB_comp3009_c0_seq1
112bp
2666 O_BomoFB123_3prime_partial:A_BomoFB_comp320_c0_seq2
145bp
 PREDICTED:_voltage-dependent_L-type_calcium_channel_subunit_beta-2_isoform_X5_[Plutella_xylostella]
GO:0005244 F voltage-gated ion channel activity
GO:0005245 F voltage-gated calcium channel activity
GO:0005262 F calcium channel activity
GO:0005886 C plasma membrane
GO:0005891 C voltage-gated calcium channel complex
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0016020 C membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0042383 C sarcolemma
GO:0070588 P calcium ion transmembrane transport
2667 O_BomoFB12400_complete:A_BomoFB_comp10200_c0_seq3
109bp
2668 O_BomoFB12401_complete:A_BomoFB_comp10201_c0_seq1
254bp
 PREDICTED:_UPF0430_protein_CG31712-like_isoform_X2_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
2669 O_BomoFB12402_complete:A_BomoFB_comp10201_c0_seq1
191bp
2670 O_BomoFB12403_complete:A_BomoFB_comp10201_c0_seq1
108bp
 hypothetical_protein_BA92_09215_[Sanguibacteroides_justesenii]
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