SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/25536
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2131 O_BomoFB11919_complete:A_BomoFB_comp10111_c0_seq3
116bp
 3-oxoacyl-ACP_synthase_[Rickettsia_hoogstraalii]
2132 O_BomoFB1191_internal:A_BomoFB_comp2973_c0_seq1
133bp
 PREDICTED:_palmitoyltransferase_ZDHHC18_[Amyelois_transitella]
GO:0005783 C endoplasmic reticulum
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016409 F palmitoyltransferase activity
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0018345 P protein palmitoylation
GO:0019706 F protein-cysteine S-palmitoyltransferase activity
GO:0046872 F metal ion binding
2133 O_BomoFB11920_complete:A_BomoFB_comp10112_c0_seq1
192bp
 PREDICTED:_calcium_channel_flower_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005262 F calcium channel activity
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006897 P endocytosis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030285 C integral component of synaptic vesicle membrane
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0046530 P photoreceptor cell differentiation
GO:0048488 P synaptic vesicle endocytosis
GO:0070588 P calcium ion transmembrane transport
2134 O_BomoFB11921_3prime_partial:A_BomoFB_comp10112_c0_seq1
104bp
 PREDICTED:_alpha-1,3-mannosyl-glycoprotein_4-beta-N-acetylglucosaminyltransferase-like_protein_MGAT4D_[Clupea_harengus]
2135 O_BomoFB11922_complete:A_BomoFB_comp10113_c1_seq4
214bp
 PREDICTED:_oxysterol-binding_protein-related_protein_11_[Papilio_xuthus]
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0010890 P positive regulation of sequestering of triglyceride
GO:0016020 C membrane
GO:0031902 C late endosome membrane
GO:0045444 P fat cell differentiation
2136 O_BomoFB11923_complete:A_BomoFB_comp10114_c0_seq1
575bp
 PREDICTED:_eukaryotic_translation_initiation_factor_2A_[Amyelois_transitella]
GO:0000049 F tRNA binding
GO:0003743 F translation initiation factor activity
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005850 C eukaryotic translation initiation factor 2 complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006417 P regulation of translation
GO:0006468 P protein phosphorylation
GO:0009967 P positive regulation of signal transduction
GO:0032933 P SREBP signaling pathway
GO:0042255 P ribosome assembly
GO:0043022 F ribosome binding
GO:0072562 C blood microparticle
2137 O_BomoFB11924_complete:A_BomoFB_comp10114_c0_seq1
138bp
 hypothetical_protein_[Cellulosilyticum_lentocellum]
2138 O_BomoFB11925_complete:A_BomoFB_comp10114_c0_seq2
340bp
 PREDICTED:_eukaryotic_translation_initiation_factor_2A_[Amyelois_transitella]
GO:0000049 F tRNA binding
GO:0003743 F translation initiation factor activity
GO:0005737 C cytoplasm
GO:0005850 C eukaryotic translation initiation factor 2 complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006417 P regulation of translation
GO:0042255 P ribosome assembly
GO:0043022 F ribosome binding
2139 O_BomoFB11926_complete:A_BomoFB_comp10114_c0_seq3
232bp
 PREDICTED:_eukaryotic_translation_initiation_factor_2A_[Amyelois_transitella]
GO:0000049 F tRNA binding
GO:0003743 F translation initiation factor activity
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005850 C eukaryotic translation initiation factor 2 complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006417 P regulation of translation
GO:0006468 P protein phosphorylation
GO:0009967 P positive regulation of signal transduction
GO:0032933 P SREBP signaling pathway
GO:0042255 P ribosome assembly
GO:0043022 F ribosome binding
GO:0072562 C blood microparticle
2140 O_BomoFB11927_complete:A_BomoFB_comp10114_c0_seq3
118bp
 WNT10_EPTST_RecName:_Full=Protein_Wnt-10,_partial_[Eptatretus_stoutii]
2141 O_BomoFB11928_complete:A_BomoFB_comp10114_c0_seq4
232bp
 PREDICTED:_eukaryotic_translation_initiation_factor_2A_[Amyelois_transitella]
GO:0000049 F tRNA binding
GO:0003743 F translation initiation factor activity
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005850 C eukaryotic translation initiation factor 2 complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006417 P regulation of translation
GO:0006468 P protein phosphorylation
GO:0009967 P positive regulation of signal transduction
GO:0032933 P SREBP signaling pathway
GO:0042255 P ribosome assembly
GO:0043022 F ribosome binding
GO:0072562 C blood microparticle
2142 O_BomoFB11929_complete:A_BomoFB_comp10114_c0_seq4
124bp
 glycolate_oxidase_[Nocardiopsis_kunsanensis]
2143 O_BomoFB1192_5prime_partial:A_BomoFB_comp2973_c0_seq1
121bp
 hypothetical_protein_Z043_117423_[Scleropages_formosus]
2144 O_BomoFB11930_complete:A_BomoFB_comp10115_c0_seq2
355bp
 G_protein_alpha_subunit_Go_isoform_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0004871 F obsolete signal transducer activity
GO:0005525 F GTP binding
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007188 P adenylate cyclase-modulating G protein-coupled receptor signaling pathway
GO:0008152 P metabolic process
GO:0019001 F guanyl nucleotide binding
GO:0031683 F G-protein beta/gamma-subunit complex binding
GO:0046872 F metal ion binding
2145 O_BomoFB11931_complete:A_BomoFB_comp10115_c0_seq2
126bp
 PREDICTED:_guanine_nucleotide-binding_protein_G(t)_subunit_alpha-1_isoform_X2_[Saimiri_boliviensis_boliviensis]
2146 O_BomoFB11932_complete:A_BomoFB_comp10117_c0_seq1
515bp
 glycerol_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006641 P triglyceride metabolic process
GO:0009409 P response to cold
GO:0010033 P response to organic substance
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
GO:0042393 F histone binding
GO:0042493 P response to xenobiotic stimulus
GO:0045471 P response to ethanol
GO:0046167 P glycerol-3-phosphate biosynthetic process
2147 O_BomoFB11933_complete:A_BomoFB_comp10118_c0_seq1
489bp
 PREDICTED:_inositol-trisphosphate_3-kinase_A_isoform_X2_[Papilio_xuthus]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0001932 P regulation of protein phosphorylation
GO:0002262 P myeloid cell homeostasis
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0008440 F inositol-1,4,5-trisphosphate 3-kinase activity
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030217 P T cell differentiation
GO:0032957 P inositol trisphosphate metabolic process
GO:0033030 P negative regulation of neutrophil apoptotic process
GO:0035726 P common myeloid progenitor cell proliferation
GO:0043647 P inositol phosphate metabolic process
GO:0045059 P positive thymic T cell selection
GO:0045061 P thymic T cell selection
GO:0045638 P negative regulation of myeloid cell differentiation
GO:0046579 P positive regulation of Ras protein signal transduction
GO:0046638 P positive regulation of alpha-beta T cell differentiation
GO:0071277 P cellular response to calcium ion
2148 O_BomoFB11934_complete:A_BomoFB_comp10118_c0_seq1
145bp
2149 O_BomoFB11935_complete:A_BomoFB_comp10118_c0_seq1
139bp
 hypothetical_protein_AL346_05785_[Chelatococcus_sp._CO-6]
2150 O_BomoFB11936_complete:A_BomoFB_comp10118_c0_seq2
348bp
 Inositol-trisphosphate_3-kinase_B_[Papilio_machaon]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0001932 P regulation of protein phosphorylation
GO:0002262 P myeloid cell homeostasis
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0008440 F inositol-1,4,5-trisphosphate 3-kinase activity
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030217 P T cell differentiation
GO:0032957 P inositol trisphosphate metabolic process
GO:0033030 P negative regulation of neutrophil apoptotic process
GO:0035726 P common myeloid progenitor cell proliferation
GO:0043647 P inositol phosphate metabolic process
GO:0045059 P positive thymic T cell selection
GO:0045061 P thymic T cell selection
GO:0045638 P negative regulation of myeloid cell differentiation
GO:0046579 P positive regulation of Ras protein signal transduction
GO:0046638 P positive regulation of alpha-beta T cell differentiation
GO:0071277 P cellular response to calcium ion
2151 O_BomoFB11937_complete:A_BomoFB_comp10118_c0_seq2
145bp
2152 O_BomoFB11938_complete:A_BomoFB_comp10118_c0_seq2
139bp
 hypothetical_protein_AL346_05785_[Chelatococcus_sp._CO-6]
2153 O_BomoFB11939_3prime_partial:A_BomoFB_comp10119_c0_seq5
186bp
 transposase_[Danaus_plexippus]
2154 O_BomoFB1193_internal:A_BomoFB_comp2973_c0_seq2
105bp
 PREDICTED:_palmitoyltransferase_ZDHHC18_[Amyelois_transitella]
GO:0005783 C endoplasmic reticulum
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016409 F palmitoyltransferase activity
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0018345 P protein palmitoylation
GO:0019706 F protein-cysteine S-palmitoyltransferase activity
GO:0046872 F metal ion binding
2155 O_BomoFB11940_internal:A_BomoFB_comp10119_c0_seq6
191bp
 transposase_[Danaus_plexippus]
2156 O_BomoFB11941_5prime_partial:A_BomoFB_comp10119_c0_seq7
185bp
 PREDICTED:_uncharacterized_protein_LOC100904897_[Metaseiulus_occidentalis]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
GO:0032502 P developmental process
2157 O_BomoFB11942_complete:A_BomoFB_comp10120_c0_seq1
141bp
 phosphate_ABC_transporter_ATP-binding_protein_[Devosia_geojensis]
2158 O_BomoFB11943_complete:A_BomoFB_comp10120_c0_seq1
123bp
 hypothetical_protein_RR46_11845_[Papilio_xuthus]
2159 O_BomoFB11944_complete:A_BomoFB_comp10120_c0_seq1
120bp
 succinate-semialdehyde_dehydrogenase_[Gluconobacter_roseus]
2160 O_BomoFB11945_complete:A_BomoFB_comp10120_c0_seq1
113bp
 unknown_unsecreted_protein_[Papilio_polytes]
previous next from show/25536

- SilkBase 1999-2023 -