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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1771 O_BomoFB11595_complete:A_BomoFB_comp10062_c0_seq2
116bp
 PTS_mannitol_transporter_subunit_IICBA_[Enterobacter_hormaechei]
1772 O_BomoFB11596_complete:A_BomoFB_comp10062_c0_seq3
638bp
 PREDICTED:_heat_shock_factor-d_isoform_X5_[Bombyx_mori]
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009408 P response to heat
GO:0022008 P neurogenesis
GO:0031427 P response to methotrexate
GO:0042742 P defense response to bacterium
GO:0042802 F identical protein binding
GO:0043388 P positive regulation of DNA binding
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050832 P defense response to fungus
1773 O_BomoFB11597_complete:A_BomoFB_comp10062_c0_seq3
116bp
 PTS_mannitol_transporter_subunit_IICBA_[Enterobacter_hormaechei]
1774 O_BomoFB11598_complete:A_BomoFB_comp10062_c0_seq4
603bp
 PREDICTED:_heat_shock_factor-d_isoform_X4_[Bombyx_mori]
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009408 P response to heat
GO:0022008 P neurogenesis
GO:0031427 P response to methotrexate
GO:0042742 P defense response to bacterium
GO:0042802 F identical protein binding
GO:0043388 P positive regulation of DNA binding
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050832 P defense response to fungus
1775 O_BomoFB11599_complete:A_BomoFB_comp10062_c0_seq4
116bp
 PTS_mannitol_transporter_subunit_IICBA_[Enterobacter_hormaechei]
1776 O_BomoFB1159_3prime_partial:A_BomoFB_comp2938_c0_seq1
106bp
 PREDICTED:_microtubule-actin_cross-linking_factor_1_isoform_X10_[Monomorium_pharaonis]
1777 O_BomoFB115_5prime_partial:A_BomoFB_comp308_c0_seq1
254bp
 PREDICTED:_DNA_polymerase_zeta_catalytic_subunit_isoform_X5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008408 F 3'-5' exonuclease activity
GO:0016035 C zeta DNA polymerase complex
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019985 P translesion synthesis
GO:0042276 P error-prone translesion synthesis
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1778 O_BomoFB11600_complete:A_BomoFB_comp10062_c0_seq5
577bp
 PREDICTED:_heat_shock_factor-d_isoform_X1_[Bombyx_mori]
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009408 P response to heat
GO:0022008 P neurogenesis
GO:0031427 P response to methotrexate
GO:0042742 P defense response to bacterium
GO:0042802 F identical protein binding
GO:0043388 P positive regulation of DNA binding
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050832 P defense response to fungus
1779 O_BomoFB11601_complete:A_BomoFB_comp10062_c0_seq5
116bp
 PTS_mannitol_transporter_subunit_IICBA_[Enterobacter_hormaechei]
1780 O_BomoFB11602_complete:A_BomoFB_comp10062_c0_seq6
604bp
 PREDICTED:_heat_shock_factor-d_isoform_X1_[Bombyx_mori]
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009408 P response to heat
GO:0022008 P neurogenesis
GO:0031427 P response to methotrexate
GO:0042742 P defense response to bacterium
GO:0042802 F identical protein binding
GO:0043388 P positive regulation of DNA binding
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050832 P defense response to fungus
1781 O_BomoFB11603_complete:A_BomoFB_comp10062_c0_seq6
116bp
 PTS_mannitol_transporter_subunit_IICBA_[Enterobacter_hormaechei]
1782 O_BomoFB11604_complete:A_BomoFB_comp10062_c0_seq7
661bp
 PREDICTED:_heat_shock_factor-d_isoform_X3_[Bombyx_mori]
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009408 P response to heat
GO:0022008 P neurogenesis
GO:0031427 P response to methotrexate
GO:0042742 P defense response to bacterium
GO:0042802 F identical protein binding
GO:0043388 P positive regulation of DNA binding
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050832 P defense response to fungus
1783 O_BomoFB11605_complete:A_BomoFB_comp10062_c0_seq7
116bp
 PTS_mannitol_transporter_subunit_IICBA_[Enterobacter_hormaechei]
1784 O_BomoFB11606_complete:A_BomoFB_comp10062_c0_seq8
581bp
 PREDICTED:_heat_shock_factor-d_isoform_X5_[Bombyx_mori]
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009408 P response to heat
GO:0022008 P neurogenesis
GO:0031427 P response to methotrexate
GO:0042742 P defense response to bacterium
GO:0042802 F identical protein binding
GO:0043388 P positive regulation of DNA binding
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050832 P defense response to fungus
1785 O_BomoFB11607_complete:A_BomoFB_comp10062_c0_seq8
116bp
 PTS_mannitol_transporter_subunit_IICBA_[Enterobacter_hormaechei]
1786 O_BomoFB11608_complete:A_BomoFB_comp10062_c0_seq9
554bp
 PREDICTED:_heat_shock_factor-d_isoform_X5_[Bombyx_mori]
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009408 P response to heat
GO:0022008 P neurogenesis
GO:0031427 P response to methotrexate
GO:0042742 P defense response to bacterium
GO:0042802 F identical protein binding
GO:0043388 P positive regulation of DNA binding
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050832 P defense response to fungus
1787 O_BomoFB11609_complete:A_BomoFB_comp10062_c0_seq9
116bp
 PTS_mannitol_transporter_subunit_IICBA_[Enterobacter_hormaechei]
1788 O_BomoFB1160_5prime_partial:A_BomoFB_comp2938_c0_seq1
102bp
 PREDICTED:_STE20-like_serine/threonine-protein_kinase_[Takifugu_rubripes]
1789 O_BomoFB11610_3prime_partial:A_BomoFB_comp10062_c0_seq10
621bp
 heat_shock_factor-d_[Bombyx_mori]
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009408 P response to heat
GO:0022008 P neurogenesis
GO:0031427 P response to methotrexate
GO:0042742 P defense response to bacterium
GO:0042802 F identical protein binding
GO:0043388 P positive regulation of DNA binding
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050832 P defense response to fungus
1790 O_BomoFB11611_complete:A_BomoFB_comp10062_c0_seq10
116bp
 PTS_mannitol_transporter_subunit_IICBA_[Enterobacter_hormaechei]
1791 O_BomoFB11612_complete:A_BomoFB_comp10064_c0_seq1
599bp
 PREDICTED:_A-kinase_anchor_protein_1,_mitochondrial_isoform_X2_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0005811 C lipid droplet
GO:0008017 F microtubule binding
GO:0010614 P negative regulation of cardiac muscle hypertrophy
GO:0010738 P regulation of protein kinase A signaling
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019901 F protein kinase binding
GO:0019903 F protein phosphatase binding
GO:0019904 F protein domain specific binding
GO:0030061 C mitochondrial crista
GO:0030346 F protein phosphatase 2B binding
GO:0031594 C neuromuscular junction
GO:0032947 F molecular adaptor activity
GO:0034237 F protein kinase A regulatory subunit binding
GO:0035308 P negative regulation of protein dephosphorylation
GO:0045211 C postsynaptic membrane
GO:0048487 F beta-tubulin binding
GO:0051534 P negative regulation of calcineurin-NFAT signaling cascade
GO:0071320 P cellular response to cAMP
GO:0071375 P cellular response to peptide hormone stimulus
1792 O_BomoFB11613_complete:A_BomoFB_comp10064_c0_seq1
107bp
 hypothetical_protein_kustc0634_[Candidatus_Kuenenia_stuttgartiensis]
1793 O_BomoFB11614_complete:A_BomoFB_comp10064_c0_seq2
599bp
 PREDICTED:_A-kinase_anchor_protein_1,_mitochondrial_isoform_X2_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0005811 C lipid droplet
GO:0008017 F microtubule binding
GO:0010614 P negative regulation of cardiac muscle hypertrophy
GO:0010738 P regulation of protein kinase A signaling
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019901 F protein kinase binding
GO:0019903 F protein phosphatase binding
GO:0019904 F protein domain specific binding
GO:0030061 C mitochondrial crista
GO:0030346 F protein phosphatase 2B binding
GO:0031594 C neuromuscular junction
GO:0032947 F molecular adaptor activity
GO:0034237 F protein kinase A regulatory subunit binding
GO:0035308 P negative regulation of protein dephosphorylation
GO:0045211 C postsynaptic membrane
GO:0048487 F beta-tubulin binding
GO:0051534 P negative regulation of calcineurin-NFAT signaling cascade
GO:0071320 P cellular response to cAMP
GO:0071375 P cellular response to peptide hormone stimulus
1794 O_BomoFB11615_complete:A_BomoFB_comp10064_c0_seq2
107bp
 hypothetical_protein_kustc0634_[Candidatus_Kuenenia_stuttgartiensis]
1795 O_BomoFB11616_complete:A_BomoFB_comp10064_c2_seq1
1765bp
 PREDICTED:_eukaryotic_translation_initiation_factor_4_gamma_3-like_[Bombyx_mori]
GO:0001934 P positive regulation of protein phosphorylation
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006417 P regulation of translation
GO:0007283 P spermatogenesis
GO:0044822 F RNA binding
GO:0045727 P positive regulation of translation
GO:0060903 P positive regulation of meiosis I
1796 O_BomoFB11617_complete:A_BomoFB_comp10064_c2_seq1
104bp
 PREDICTED:_immunoglobulin_superfamily_member_10_[Corvus_cornix_cornix]
1797 O_BomoFB11618_complete:A_BomoFB_comp10064_c2_seq2
1502bp
 PREDICTED:_eukaryotic_translation_initiation_factor_4_gamma_3-like_[Bombyx_mori]
GO:0001934 P positive regulation of protein phosphorylation
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006417 P regulation of translation
GO:0007283 P spermatogenesis
GO:0044822 F RNA binding
GO:0045727 P positive regulation of translation
GO:0060903 P positive regulation of meiosis I
1798 O_BomoFB11619_complete:A_BomoFB_comp10064_c2_seq2
104bp
 PREDICTED:_immunoglobulin_superfamily_member_10_[Corvus_cornix_cornix]
1799 O_BomoFB1161_complete:A_BomoFB_comp2940_c0_seq1
181bp
 PREDICTED:_60S_ribosome_subunit_biogenesis_protein_NIP7_homolog_[Amyelois_transitella]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0042254 P ribosome biogenesis
GO:0042255 P ribosome assembly
1800 O_BomoFB11620_5prime_partial:A_BomoFB_comp10065_c0_seq1
863bp
 Host_cell_factor_1_[Papilio_xuthus]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000123 C histone acetyltransferase complex
GO:0001205 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007005 P mitochondrion organization
GO:0007049 P cell cycle
GO:0010628 P positive regulation of gene expression
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016568 P chromatin organization
GO:0019046 P release from viral latency
GO:0030424 C axon
GO:0030425 C dendrite
GO:0042802 F identical protein binding
GO:0043025 C neuronal cell body
GO:0043254 P regulation of protein-containing complex assembly
GO:0043981 P histone H4-K5 acetylation
GO:0043982 P histone H4-K8 acetylation
GO:0043984 P histone H4-K16 acetylation
GO:0043995 F histone acetyltransferase activity (H4-K5 specific)
GO:0043996 F histone acetyltransferase activity (H4-K8 specific)
GO:0045787 P positive regulation of cell cycle
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046972 F histone acetyltransferase activity (H4-K16 specific)
GO:0048188 C Set1C/COMPASS complex
GO:0050821 P protein stabilization
GO:0070461 C SAGA-type complex
GO:0070688 C obsolete MLL5-L complex
GO:0071339 C MLL1 complex
GO:0071407 P cellular response to organic cyclic compound
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