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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1021 O_BomoFB1091_3prime_partial:A_BomoFB_comp2882_c1_seq1
268bp
 PREDICTED:_digestive_organ_expansion_factor_homolog_isoform_X2_[Bombyx_mori]
1022 O_BomoFB10920_internal:A_BomoFB_comp9917_c0_seq3
126bp
 PREDICTED:_SAFB-like_transcription_modulator_isoform_X1_[Amyelois_transitella]
1023 O_BomoFB10921_internal:A_BomoFB_comp9917_c0_seq3
125bp
 DNA_alkylation_response_protein_[Streptomyces_longwoodensis]
1024 O_BomoFB10922_complete:A_BomoFB_comp9918_c0_seq1
419bp
 PREDICTED:_golgin-45_[Papilio_xuthus]
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005796 C Golgi lumen
GO:0006810 P transport
GO:0007030 P Golgi organization
GO:0015031 P protein transport
GO:0016192 P vesicle-mediated transport
GO:0019899 F enzyme binding
GO:0031625 F ubiquitin protein ligase binding
GO:0043001 P Golgi to plasma membrane protein transport
1025 O_BomoFB10923_complete:A_BomoFB_comp9919_c0_seq1
163bp
 39S_ribosomal_protein_L41,_mitochondrial_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
1026 O_BomoFB10924_complete:A_BomoFB_comp9919_c0_seq2
163bp
 39S_ribosomal_protein_L41,_mitochondrial_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
1027 O_BomoFB10925_complete:A_BomoFB_comp9920_c0_seq3
156bp
 PREDICTED:_trafficking_protein_particle_complex_subunit_2-like_protein_[Papilio_polytes]
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0016192 P vesicle-mediated transport
GO:0048471 C perinuclear region of cytoplasm
1028 O_BomoFB10926_complete:A_BomoFB_comp9920_c0_seq4
156bp
 PREDICTED:_trafficking_protein_particle_complex_subunit_2-like_protein_[Papilio_polytes]
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0016192 P vesicle-mediated transport
GO:0048471 C perinuclear region of cytoplasm
1029 O_BomoFB10927_complete:A_BomoFB_comp9920_c0_seq6
156bp
 PREDICTED:_trafficking_protein_particle_complex_subunit_2-like_protein_[Papilio_polytes]
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0016192 P vesicle-mediated transport
GO:0048471 C perinuclear region of cytoplasm
1030 O_BomoFB10928_complete:A_BomoFB_comp9921_c0_seq3
408bp
 PREDICTED:_porphobilinogen_deaminase_[Papilio_xuthus]
GO:0000793 C condensed chromosome
GO:0001666 P response to hypoxia
GO:0004418 F hydroxymethylbilane synthase activity
GO:0004852 F uroporphyrinogen-III synthase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006779 P porphyrin-containing compound biosynthetic process
GO:0006782 P protoporphyrinogen IX biosynthetic process
GO:0006783 P heme biosynthetic process
GO:0009725 P response to hormone
GO:0009743 P response to carbohydrate
GO:0010038 P response to metal ion
GO:0010043 P response to zinc ion
GO:0010288 P response to lead ion
GO:0014070 P response to organic cyclic compound
GO:0016740 F transferase activity
GO:0018160 P peptidyl-pyrromethane cofactor linkage
GO:0030424 C axon
GO:0031100 P animal organ regeneration
GO:0031406 F carboxylic acid binding
GO:0031667 P response to nutrient levels
GO:0032025 P response to cobalt ion
GO:0032355 P response to estradiol
GO:0033014 P tetrapyrrole biosynthetic process
GO:0033273 P response to vitamin
GO:0042493 P response to xenobiotic stimulus
GO:0043176 F amine binding
GO:0043200 P response to amino acid
GO:0048708 P astrocyte differentiation
GO:0050662 F obsolete coenzyme binding
GO:0051597 P response to methylmercury
GO:0071236 P cellular response to antibiotic
GO:0071243 P cellular response to arsenic-containing substance
GO:0071284 P cellular response to lead ion
GO:0071345 P cellular response to cytokine stimulus
GO:0071418 P cellular response to amine stimulus
GO:0071549 P cellular response to dexamethasone stimulus
1031 O_BomoFB10929_complete:A_BomoFB_comp9921_c0_seq3
166bp
1032 O_BomoFB1092_complete:A_BomoFB_comp2887_c0_seq1
241bp
 PREDICTED:_ribosome_biogenesis_protein_TSR3_homolog_[Papilio_xuthus]
GO:0006364 P rRNA processing
GO:0030490 P maturation of SSU-rRNA
GO:0042254 P ribosome biogenesis
1033 O_BomoFB10930_complete:A_BomoFB_comp9922_c0_seq1
501bp
 PREDICTED:_fumarate_hydratase,_mitochondrial-like_[Amyelois_transitella]
GO:0003824 F catalytic activity
GO:0004333 F fumarate hydratase activity
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006099 P tricarboxylic acid cycle
GO:0006106 P fumarate metabolic process
GO:0006108 P malate metabolic process
GO:0016829 F lyase activity
GO:0045239 C tricarboxylic acid cycle enzyme complex
GO:0051262 P protein tetramerization
1034 O_BomoFB10931_complete:A_BomoFB_comp9922_c0_seq1
193bp
 Uncharacterised_protein_[Bordetella_pertussis]
1035 O_BomoFB10932_complete:A_BomoFB_comp9922_c0_seq2
468bp
 PREDICTED:_methionine_aminopeptidase_2_[Papilio_polytes]
GO:0004177 F aminopeptidase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008235 F metalloexopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0070006 F metalloaminopeptidase activity
GO:0070084 P protein initiator methionine removal
1036 O_BomoFB10933_complete:A_BomoFB_comp9922_c0_seq3
501bp
 PREDICTED:_fumarate_hydratase,_mitochondrial-like_[Amyelois_transitella]
GO:0003824 F catalytic activity
GO:0004333 F fumarate hydratase activity
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006099 P tricarboxylic acid cycle
GO:0006106 P fumarate metabolic process
GO:0006108 P malate metabolic process
GO:0016829 F lyase activity
GO:0045239 C tricarboxylic acid cycle enzyme complex
GO:0051262 P protein tetramerization
1037 O_BomoFB10934_complete:A_BomoFB_comp9922_c0_seq3
468bp
 PREDICTED:_methionine_aminopeptidase_2_[Papilio_polytes]
GO:0004177 F aminopeptidase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008235 F metalloexopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0070006 F metalloaminopeptidase activity
GO:0070084 P protein initiator methionine removal
1038 O_BomoFB10935_complete:A_BomoFB_comp9922_c0_seq3
193bp
 Uncharacterised_protein_[Bordetella_pertussis]
1039 O_BomoFB10936_complete:A_BomoFB_comp9922_c0_seq4
479bp
 PREDICTED:_fumarate_hydratase,_mitochondrial-like_[Papilio_polytes]
GO:0003824 F catalytic activity
GO:0004333 F fumarate hydratase activity
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006099 P tricarboxylic acid cycle
GO:0006106 P fumarate metabolic process
GO:0006108 P malate metabolic process
GO:0016829 F lyase activity
GO:0045239 C tricarboxylic acid cycle enzyme complex
GO:0051262 P protein tetramerization
1040 O_BomoFB10937_complete:A_BomoFB_comp9922_c0_seq4
193bp
 Uncharacterised_protein_[Bordetella_pertussis]
1041 O_BomoFB10938_complete:A_BomoFB_comp9922_c0_seq6
479bp
 PREDICTED:_fumarate_hydratase,_mitochondrial-like_[Papilio_polytes]
GO:0003824 F catalytic activity
GO:0004333 F fumarate hydratase activity
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006099 P tricarboxylic acid cycle
GO:0006106 P fumarate metabolic process
GO:0006108 P malate metabolic process
GO:0016829 F lyase activity
GO:0045239 C tricarboxylic acid cycle enzyme complex
GO:0051262 P protein tetramerization
1042 O_BomoFB10939_complete:A_BomoFB_comp9922_c0_seq6
468bp
 PREDICTED:_methionine_aminopeptidase_2_[Papilio_polytes]
GO:0004177 F aminopeptidase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008235 F metalloexopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0070006 F metalloaminopeptidase activity
GO:0070084 P protein initiator methionine removal
1043 O_BomoFB1093_complete:A_BomoFB_comp2888_c0_seq1
705bp
 PREDICTED:_cell_division_cycle_protein_27_homolog,_partial_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005680 C anaphase-promoting complex
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005876 C spindle microtubule
GO:0007091 P metaphase/anaphase transition of mitotic cell cycle
GO:0016567 P protein ubiquitination
GO:0019903 F protein phosphatase binding
GO:0070979 P protein K11-linked ubiquitination
1044 O_BomoFB10940_complete:A_BomoFB_comp9922_c0_seq6
193bp
 Uncharacterised_protein_[Bordetella_pertussis]
1045 O_BomoFB10941_5prime_partial:A_BomoFB_comp9923_c0_seq1
584bp
 PREDICTED:_sorting_nexin_lst-4_isoform_X1_[Papilio_xuthus]
GO:0005515 F protein binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0006886 P intracellular protein transport
GO:0007067 P mitotic cell cycle
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0019902 F phosphatase binding
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:0043621 F protein self-association
GO:0045335 C phagocytic vesicle
GO:0051020 F GTPase binding
GO:0090386 P phagosome maturation involved in apoptotic cell clearance
GO:0090389 P phagosome-lysosome fusion involved in apoptotic cell clearance
1046 O_BomoFB10942_5prime_partial:A_BomoFB_comp9924_c0_seq1
318bp
 hypothetical_protein_KGM_03155_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0000346 C transcription export complex
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003729 F mRNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0016032 P viral process
GO:0016607 C nuclear speck
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0042405 C nuclear inclusion body
GO:0044822 F RNA binding
GO:0051028 P mRNA transport
1047 O_BomoFB10943_complete:A_BomoFB_comp9924_c0_seq2
319bp
 Nuclear_RNA_export_factor_1_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006378 P mRNA polyadenylation
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0007616 P long-term memory
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0030534 P adult behavior
GO:0031965 C nuclear membrane
GO:0044822 F RNA binding
GO:0047485 F protein N-terminus binding
GO:0051028 P mRNA transport
GO:0051168 P nuclear export
1048 O_BomoFB10944_complete:A_BomoFB_comp9924_c0_seq3
614bp
 hypothetical_protein_KGM_03155_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006378 P mRNA polyadenylation
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0007616 P long-term memory
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0030534 P adult behavior
GO:0031965 C nuclear membrane
GO:0044822 F RNA binding
GO:0047485 F protein N-terminus binding
GO:0051028 P mRNA transport
GO:0051168 P nuclear export
1049 O_BomoFB10945_complete:A_BomoFB_comp9925_c0_seq1
134bp
 PREDICTED:_histidine_decarboxylase-like_[Amyelois_transitella]
1050 O_BomoFB10946_complete:A_BomoFB_comp9925_c0_seq2
513bp
 PREDICTED:_histidine_decarboxylase_isoform_X3_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004398 F histidine decarboxylase activity
GO:0006520 P cellular amino acid metabolic process
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0019752 P carboxylic acid metabolic process
GO:0030170 F pyridoxal phosphate binding
GO:0042051 P compound eye photoreceptor development
GO:0042423 P catecholamine biosynthetic process
GO:0043052 P thermotaxis
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