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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9781 O_BomoEE18804_complete:A_BomoEE_comp69538_c1_seq6
125bp
9782 O_BomoEE18805_complete:A_BomoEE_comp69538_c1_seq6
125bp
9783 O_BomoEE18806_complete:A_BomoEE_comp69538_c1_seq7
522bp
 PREDICTED:_nuclear_hormone_receptor_family_member_nhr-8-like_[Amyelois_transitella]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004879 F nuclear receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008270 F zinc ion binding
GO:0010906 P regulation of glucose metabolic process
GO:0030522 P intracellular receptor signaling pathway
GO:0042594 P response to starvation
GO:0042632 P cholesterol homeostasis
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0070328 P triglyceride homeostasis
GO:0070873 P regulation of glycogen metabolic process
9784 O_BomoEE18807_complete:A_BomoEE_comp69538_c1_seq7
125bp
9785 O_BomoEE18808_complete:A_BomoEE_comp69538_c1_seq7
125bp
9786 O_BomoEE18809_complete:A_BomoEE_comp69538_c1_seq8
286bp
 PREDICTED:_nuclear_hormone_receptor_family_member_nhr-8_[Papilio_polytes]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004879 F nuclear receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008270 F zinc ion binding
GO:0010906 P regulation of glucose metabolic process
GO:0030522 P intracellular receptor signaling pathway
GO:0042594 P response to starvation
GO:0042632 P cholesterol homeostasis
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0070328 P triglyceride homeostasis
GO:0070873 P regulation of glycogen metabolic process
9787 O_BomoEE1880_complete:A_BomoEE_comp32989_c0_seq1
172bp
 peptidylprolyl_isomerase_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005515 F protein binding
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006457 P protein folding
GO:0008380 P RNA splicing
GO:0016853 F isomerase activity
GO:0070062 C extracellular exosome
GO:0071013 C catalytic step 2 spliceosome
9788 O_BomoEE18810_complete:A_BomoEE_comp69538_c1_seq8
174bp
 PREDICTED:_nuclear_receptor_subfamily_1_group_I_member_2-like,_partial_[Amyelois_transitella]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004879 F nuclear receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008270 F zinc ion binding
GO:0010906 P regulation of glucose metabolic process
GO:0030522 P intracellular receptor signaling pathway
GO:0042594 P response to starvation
GO:0042632 P cholesterol homeostasis
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0070328 P triglyceride homeostasis
GO:0070873 P regulation of glycogen metabolic process
9789 O_BomoEE18811_complete:A_BomoEE_comp69538_c1_seq8
117bp
9790 O_BomoEE18812_complete:A_BomoEE_comp69539_c1_seq1
315bp
 PREDICTED:_antennapedia_homologue_protein_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007384 P specification of segmental identity, thorax
GO:0009948 P anterior/posterior axis specification
GO:0043565 F sequence-specific DNA binding
9791 O_BomoEE18813_complete:A_BomoEE_comp69539_c1_seq2
315bp
 PREDICTED:_antennapedia_homologue_protein_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007384 P specification of segmental identity, thorax
GO:0009948 P anterior/posterior axis specification
GO:0043565 F sequence-specific DNA binding
9792 O_BomoEE18814_complete:A_BomoEE_comp69539_c1_seq3
315bp
 PREDICTED:_antennapedia_homologue_protein_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007384 P specification of segmental identity, thorax
GO:0009948 P anterior/posterior axis specification
GO:0043565 F sequence-specific DNA binding
9793 O_BomoEE18815_complete:A_BomoEE_comp69539_c1_seq4
304bp
 PREDICTED:_antennapedia_homologue_protein_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007384 P specification of segmental identity, thorax
GO:0009948 P anterior/posterior axis specification
GO:0043565 F sequence-specific DNA binding
9794 O_BomoEE18816_complete:A_BomoEE_comp69539_c1_seq5
315bp
 PREDICTED:_antennapedia_homologue_protein_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007384 P specification of segmental identity, thorax
GO:0009948 P anterior/posterior axis specification
GO:0043565 F sequence-specific DNA binding
9795 O_BomoEE18817_complete:A_BomoEE_comp69539_c1_seq6
304bp
 PREDICTED:_antennapedia_homologue_protein_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007384 P specification of segmental identity, thorax
GO:0009948 P anterior/posterior axis specification
GO:0043565 F sequence-specific DNA binding
9796 O_BomoEE18818_5prime_partial:A_BomoEE_comp69541_c1_seq1
104bp
9797 O_BomoEE18819_complete:A_BomoEE_comp69543_c0_seq1
171bp
 PREDICTED:_protein_Wnt-6_[Bombyx_mori]
GO:0001658 P branching involved in ureteric bud morphogenesis
GO:0005102 F signaling receptor binding
GO:0005109 F frizzled binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0005788 C endoplasmic reticulum lumen
GO:0007165 P signal transduction
GO:0007267 P cell-cell signaling
GO:0007275 P multicellular organism development
GO:0009798 P axis specification
GO:0009887 P animal organ morphogenesis
GO:0009986 C cell surface
GO:0010628 P positive regulation of gene expression
GO:0016055 P Wnt signaling pathway
GO:0030182 P neuron differentiation
GO:0042475 P odontogenesis of dentin-containing tooth
GO:0045165 P cell fate commitment
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0060684 P epithelial-mesenchymal cell signaling
GO:0070172 P positive regulation of tooth mineralization
GO:0072079 P nephron tubule formation
GO:0072080 P nephron tubule development
9798 O_BomoEE1881_complete:A_BomoEE_comp32996_c0_seq1
217bp
 SCP-related_protein_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
9799 O_BomoEE18820_complete:A_BomoEE_comp69543_c0_seq1
149bp
 PREDICTED:_protein_Wnt-6_[Bombyx_mori]
GO:0001658 P branching involved in ureteric bud morphogenesis
GO:0005102 F signaling receptor binding
GO:0005109 F frizzled binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0005788 C endoplasmic reticulum lumen
GO:0007165 P signal transduction
GO:0007267 P cell-cell signaling
GO:0007275 P multicellular organism development
GO:0009798 P axis specification
GO:0009887 P animal organ morphogenesis
GO:0009986 C cell surface
GO:0010628 P positive regulation of gene expression
GO:0016055 P Wnt signaling pathway
GO:0030182 P neuron differentiation
GO:0042475 P odontogenesis of dentin-containing tooth
GO:0045165 P cell fate commitment
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0060684 P epithelial-mesenchymal cell signaling
GO:0070172 P positive regulation of tooth mineralization
GO:0072079 P nephron tubule formation
GO:0072080 P nephron tubule development
9800 O_BomoEE18821_complete:A_BomoEE_comp69543_c0_seq2
203bp
 PREDICTED:_protein_Wnt-6_[Bombyx_mori]
GO:0001658 P branching involved in ureteric bud morphogenesis
GO:0005102 F signaling receptor binding
GO:0005109 F frizzled binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0005788 C endoplasmic reticulum lumen
GO:0007165 P signal transduction
GO:0007267 P cell-cell signaling
GO:0007275 P multicellular organism development
GO:0009798 P axis specification
GO:0009887 P animal organ morphogenesis
GO:0009986 C cell surface
GO:0010628 P positive regulation of gene expression
GO:0016055 P Wnt signaling pathway
GO:0030182 P neuron differentiation
GO:0042475 P odontogenesis of dentin-containing tooth
GO:0045165 P cell fate commitment
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0060684 P epithelial-mesenchymal cell signaling
GO:0070172 P positive regulation of tooth mineralization
GO:0072079 P nephron tubule formation
GO:0072080 P nephron tubule development
9801 O_BomoEE18822_complete:A_BomoEE_comp69543_c0_seq2
149bp
 PREDICTED:_protein_Wnt-6_[Bombyx_mori]
GO:0001658 P branching involved in ureteric bud morphogenesis
GO:0005102 F signaling receptor binding
GO:0005109 F frizzled binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0005788 C endoplasmic reticulum lumen
GO:0007165 P signal transduction
GO:0007267 P cell-cell signaling
GO:0007275 P multicellular organism development
GO:0009798 P axis specification
GO:0009887 P animal organ morphogenesis
GO:0009986 C cell surface
GO:0010628 P positive regulation of gene expression
GO:0016055 P Wnt signaling pathway
GO:0030182 P neuron differentiation
GO:0042475 P odontogenesis of dentin-containing tooth
GO:0045165 P cell fate commitment
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0060684 P epithelial-mesenchymal cell signaling
GO:0070172 P positive regulation of tooth mineralization
GO:0072079 P nephron tubule formation
GO:0072080 P nephron tubule development
9802 O_BomoEE18823_complete:A_BomoEE_comp69544_c0_seq1
598bp
 PREDICTED:_zinc_finger_protein_729-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0033674 P positive regulation of kinase activity
GO:0043066 P negative regulation of apoptotic process
GO:0045648 P positive regulation of erythrocyte differentiation
GO:0045654 P positive regulation of megakaryocyte differentiation
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0051781 P positive regulation of cell division
GO:0072707 P cellular response to sodium dodecyl sulfate
GO:1901989 P positive regulation of cell cycle phase transition
9803 O_BomoEE18824_complete:A_BomoEE_comp69544_c0_seq1
442bp
 PREDICTED:_zinc_finger_protein_729-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
9804 O_BomoEE18825_3prime_partial:A_BomoEE_comp69546_c0_seq1
158bp
 PREDICTED:_protocadherin-16_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007163 P establishment or maintenance of cell polarity
GO:0007267 P cell-cell signaling
GO:0009653 P anatomical structure morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016337 P cell-cell adhesion
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0048471 C perinuclear region of cytoplasm
GO:0070062 C extracellular exosome
9805 O_BomoEE18826_3prime_partial:A_BomoEE_comp69546_c0_seq2
127bp
 PREDICTED:_protocadherin-16_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007163 P establishment or maintenance of cell polarity
GO:0007267 P cell-cell signaling
GO:0009653 P anatomical structure morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016337 P cell-cell adhesion
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0048471 C perinuclear region of cytoplasm
GO:0070062 C extracellular exosome
9806 O_BomoEE18827_3prime_partial:A_BomoEE_comp69546_c0_seq4
158bp
 PREDICTED:_protocadherin-16_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007163 P establishment or maintenance of cell polarity
GO:0007267 P cell-cell signaling
GO:0009653 P anatomical structure morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016337 P cell-cell adhesion
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0048471 C perinuclear region of cytoplasm
GO:0070062 C extracellular exosome
9807 O_BomoEE18828_complete:A_BomoEE_comp69548_c0_seq1
238bp
 PREDICTED:_PQ-loop_repeat-containing_protein_3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0006488 P dolichol-linked oligosaccharide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
9808 O_BomoEE18829_complete:A_BomoEE_comp69548_c0_seq2
238bp
 PREDICTED:_PQ-loop_repeat-containing_protein_3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0006488 P dolichol-linked oligosaccharide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
9809 O_BomoEE1882_complete:A_BomoEE_comp33003_c0_seq1
370bp
 PREDICTED:_uncharacterized_protein_C6orf136_homolog_[Bombyx_mori]
9810 O_BomoEE18830_complete:A_BomoEE_comp69548_c0_seq3
238bp
 PREDICTED:_PQ-loop_repeat-containing_protein_3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0006488 P dolichol-linked oligosaccharide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
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