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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9631 O_BomoEE1866_complete:A_BomoEE_comp32944_c0_seq2
119bp
 PREDICTED:_negative_elongation_factor_A_[Bombyx_mori]
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051571 P positive regulation of histone H3-K4 methylation
9632 O_BomoEE18670_complete:A_BomoEE_comp69500_c0_seq2
201bp
 AP-3_complex_subunit_beta-2_[Papilio_xuthus]
GO:0005215 F transporter activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006892 P post-Golgi vesicle-mediated transport
GO:0008089 P anterograde axonal transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030123 C AP-3 adaptor complex
GO:0030137 C COPI-coated vesicle
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0048490 P anterograde synaptic vesicle transport
GO:1904115 C axon cytoplasm
9633 O_BomoEE18671_3prime_partial:A_BomoEE_comp69500_c0_seq3
111bp
 PREDICTED:_AP-3_complex_subunit_beta-2_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008089 P anterograde axonal transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030123 C AP-3 adaptor complex
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0048490 P anterograde synaptic vesicle transport
GO:1904115 C axon cytoplasm
9634 O_BomoEE18672_complete:A_BomoEE_comp69500_c0_seq4
265bp
 PREDICTED:_AP-3_complex_subunit_beta-2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006892 P post-Golgi vesicle-mediated transport
GO:0008089 P anterograde axonal transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030123 C AP-3 adaptor complex
GO:0030137 C COPI-coated vesicle
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0048490 P anterograde synaptic vesicle transport
GO:1904115 C axon cytoplasm
9635 O_BomoEE18673_3prime_partial:A_BomoEE_comp69500_c0_seq5
420bp
 PREDICTED:_AP-3_complex_subunit_beta-2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006892 P post-Golgi vesicle-mediated transport
GO:0008089 P anterograde axonal transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030123 C AP-3 adaptor complex
GO:0030137 C COPI-coated vesicle
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0048490 P anterograde synaptic vesicle transport
GO:1904115 C axon cytoplasm
9636 O_BomoEE18674_5prime_partial:A_BomoEE_comp69504_c1_seq1
158bp
 PREDICTED:_radial_spoke_head_protein_6_homolog_A_[Bombyx_mori]
GO:0005622 C intracellular anatomical structure
9637 O_BomoEE18675_complete:A_BomoEE_comp69504_c1_seq2
116bp
 PREDICTED:_radial_spoke_head_protein_6_homolog_A_[Bombyx_mori]
GO:0005622 C intracellular anatomical structure
9638 O_BomoEE18676_5prime_partial:A_BomoEE_comp69505_c0_seq1
105bp
9639 O_BomoEE18677_5prime_partial:A_BomoEE_comp69508_c1_seq1
104bp
9640 O_BomoEE18678_5prime_partial:A_BomoEE_comp69508_c2_seq1
642bp
 PREDICTED:_ribonuclease_L_inhibitor_homolog_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
9641 O_BomoEE18679_complete:A_BomoEE_comp69508_c2_seq1
471bp
 PREDICTED:_monocarboxylate_transporter_13-like_isoform_X1_[Amyelois_transitella]
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0015129 F lactate transmembrane transporter activity
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035879 P plasma membrane lactate transport
GO:0055085 P transmembrane transport
9642 O_BomoEE1867_complete:A_BomoEE_comp32954_c0_seq1
133bp
 putative_p53_and_DNA_damage-regulated_protein_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0006457 P protein folding
GO:0008150 P biological_process
GO:0016272 C prefoldin complex
GO:0051082 F unfolded protein binding
9643 O_BomoEE18680_complete:A_BomoEE_comp69508_c2_seq1
109bp
9644 O_BomoEE18681_complete:A_BomoEE_comp69508_c2_seq2
471bp
 PREDICTED:_monocarboxylate_transporter_13-like_isoform_X1_[Amyelois_transitella]
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0015129 F lactate transmembrane transporter activity
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035879 P plasma membrane lactate transport
GO:0055085 P transmembrane transport
9645 O_BomoEE18682_complete:A_BomoEE_comp69508_c2_seq2
230bp
 PREDICTED:_ribonuclease_L_inhibitor_homolog_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
9646 O_BomoEE18683_complete:A_BomoEE_comp69508_c2_seq2
109bp
9647 O_BomoEE18684_3prime_partial:A_BomoEE_comp69512_c0_seq1
1349bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101739343_[Bombyx_mori]
9648 O_BomoEE18685_3prime_partial:A_BomoEE_comp69512_c0_seq2
1349bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101739343_[Bombyx_mori]
9649 O_BomoEE18686_3prime_partial:A_BomoEE_comp69513_c0_seq1
1371bp
 PREDICTED:_dedicator_of_cytokinesis_protein_7_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007264 P small GTPase mediated signal transduction
GO:0007596 P blood coagulation
GO:0043547 P positive regulation of GTPase activity
GO:0048471 C perinuclear region of cytoplasm
9650 O_BomoEE18687_complete:A_BomoEE_comp69513_c0_seq1
407bp
9651 O_BomoEE18688_complete:A_BomoEE_comp69513_c0_seq1
154bp
9652 O_BomoEE18689_5prime_partial:A_BomoEE_comp69513_c0_seq1
147bp
9653 O_BomoEE1868_complete:A_BomoEE_comp32954_c0_seq1
101bp
9654 O_BomoEE18690_3prime_partial:A_BomoEE_comp69513_c0_seq1
115bp
9655 O_BomoEE18691_complete:A_BomoEE_comp69513_c0_seq1
107bp
9656 O_BomoEE18692_complete:A_BomoEE_comp69513_c0_seq2
713bp
 PREDICTED:_dedicator_of_cytokinesis_protein_7_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005925 C focal adhesion
GO:0007264 P small GTPase mediated signal transduction
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0008180 C COP9 signalosome
GO:0014911 P positive regulation of smooth muscle cell migration
GO:0022027 P interkinetic nuclear migration
GO:0030154 P cell differentiation
GO:0030424 C axon
GO:0031175 P neuron projection development
GO:0033138 P positive regulation of peptidyl-serine phosphorylation
GO:0042995 C cell projection
GO:0043473 P pigmentation
GO:0045200 P establishment of neuroblast polarity
GO:0048365 F small GTPase binding
GO:0050767 P regulation of neurogenesis
GO:0090630 P activation of GTPase activity
9657 O_BomoEE18693_3prime_partial:A_BomoEE_comp69513_c0_seq2
691bp
 PREDICTED:_dedicator_of_cytokinesis_protein_7_[Bombyx_mori]
GO:0001771 P immunological synapse formation
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0007264 P small GTPase mediated signal transduction
GO:0007596 P blood coagulation
GO:0016020 C membrane
GO:0031252 C cell leading edge
GO:0036336 P dendritic cell migration
GO:0043547 P positive regulation of GTPase activity
GO:0061485 P memory T cell proliferation
GO:0070233 P negative regulation of T cell apoptotic process
9658 O_BomoEE18694_complete:A_BomoEE_comp69513_c0_seq2
407bp
9659 O_BomoEE18695_complete:A_BomoEE_comp69513_c0_seq2
154bp
9660 O_BomoEE18696_5prime_partial:A_BomoEE_comp69513_c0_seq2
147bp
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