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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9571 O_BomoEE18615_complete:A_BomoEE_comp69471_c1_seq2
579bp
 Integrator_complex_subunit_10_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0016180 P snRNA processing
GO:0032039 C integrator complex
9572 O_BomoEE18616_complete:A_BomoEE_comp69471_c1_seq2
292bp
 PREDICTED:_transcription_initiation_factor_TFIID_subunit_5_[Amyelois_transitella]
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007221 P positive regulation of transcription of Notch receptor target
GO:0022008 P neurogenesis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051123 P RNA polymerase II preinitiation complex assembly
9573 O_BomoEE18617_complete:A_BomoEE_comp69471_c1_seq3
579bp
 Integrator_complex_subunit_10_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0016180 P snRNA processing
GO:0032039 C integrator complex
9574 O_BomoEE18618_complete:A_BomoEE_comp69471_c1_seq3
134bp
 PREDICTED:_transcription_initiation_factor_TFIID_subunit_5_[Amyelois_transitella]
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007221 P positive regulation of transcription of Notch receptor target
GO:0022008 P neurogenesis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051123 P RNA polymerase II preinitiation complex assembly
9575 O_BomoEE18619_complete:A_BomoEE_comp69471_c1_seq4
579bp
 Integrator_complex_subunit_10_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0016180 P snRNA processing
GO:0032039 C integrator complex
9576 O_BomoEE1861_complete:A_BomoEE_comp32930_c0_seq1
137bp
9577 O_BomoEE18620_complete:A_BomoEE_comp69471_c1_seq4
358bp
 PREDICTED:_transcription_initiation_factor_TFIID_subunit_5_[Amyelois_transitella]
GO:0003700 F DNA-binding transcription factor activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0015629 C actin cytoskeleton
GO:0016032 P viral process
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0033276 C transcription factor TFTC complex
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0043231 C intracellular membrane-bounded organelle
GO:0044212 F transcription cis-regulatory region binding
GO:0046983 F protein dimerization activity
GO:1901796 P regulation of signal transduction by p53 class mediator
9578 O_BomoEE18621_complete:A_BomoEE_comp69471_c1_seq4
292bp
 PREDICTED:_transcription_initiation_factor_TFIID_subunit_5_[Amyelois_transitella]
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007221 P positive regulation of transcription of Notch receptor target
GO:0022008 P neurogenesis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051123 P RNA polymerase II preinitiation complex assembly
9579 O_BomoEE18622_complete:A_BomoEE_comp69471_c1_seq5
429bp
 PREDICTED:_transcription_initiation_factor_TFIID_subunit_5_[Amyelois_transitella]
GO:0003700 F DNA-binding transcription factor activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0015629 C actin cytoskeleton
GO:0016032 P viral process
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0033276 C transcription factor TFTC complex
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0043231 C intracellular membrane-bounded organelle
GO:0044212 F transcription cis-regulatory region binding
GO:0046983 F protein dimerization activity
GO:1901796 P regulation of signal transduction by p53 class mediator
9580 O_BomoEE18623_complete:A_BomoEE_comp69471_c1_seq6
651bp
 PREDICTED:_transcription_initiation_factor_TFIID_subunit_5_[Amyelois_transitella]
GO:0003700 F DNA-binding transcription factor activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0015629 C actin cytoskeleton
GO:0016032 P viral process
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0033276 C transcription factor TFTC complex
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0043231 C intracellular membrane-bounded organelle
GO:0044212 F transcription cis-regulatory region binding
GO:0046983 F protein dimerization activity
GO:1901796 P regulation of signal transduction by p53 class mediator
9581 O_BomoEE18624_complete:A_BomoEE_comp69471_c1_seq6
579bp
 Integrator_complex_subunit_10_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0016180 P snRNA processing
GO:0032039 C integrator complex
9582 O_BomoEE18625_complete:A_BomoEE_comp69471_c1_seq7
358bp
 PREDICTED:_transcription_initiation_factor_TFIID_subunit_5_[Amyelois_transitella]
GO:0003700 F DNA-binding transcription factor activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0015629 C actin cytoskeleton
GO:0016032 P viral process
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0033276 C transcription factor TFTC complex
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0043231 C intracellular membrane-bounded organelle
GO:0044212 F transcription cis-regulatory region binding
GO:0046983 F protein dimerization activity
GO:1901796 P regulation of signal transduction by p53 class mediator
9583 O_BomoEE18626_complete:A_BomoEE_comp69474_c0_seq1
1482bp
 PREDICTED:_activating_signal_cointegrator_1_complex_subunit_3_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006281 P DNA repair
GO:0006307 P DNA dealkylation involved in DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0008283 P cell population proliferation
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0043140 F 3'-5' DNA helicase activity
GO:0044822 F RNA binding
9584 O_BomoEE18627_complete:A_BomoEE_comp69474_c0_seq1
674bp
 PREDICTED:_activating_signal_cointegrator_1_complex_subunit_3_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006281 P DNA repair
GO:0006307 P DNA dealkylation involved in DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0008283 P cell population proliferation
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0043140 F 3'-5' DNA helicase activity
GO:0044822 F RNA binding
9585 O_BomoEE18628_complete:A_BomoEE_comp69474_c0_seq1
119bp
9586 O_BomoEE18629_complete:A_BomoEE_comp69474_c0_seq1
106bp
9587 O_BomoEE1862_complete:A_BomoEE_comp32938_c0_seq1
638bp
 PREDICTED:_cleft_lip_and_palate_transmembrane_protein_1_homolog_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030154 P cell differentiation
9588 O_BomoEE18630_complete:A_BomoEE_comp69474_c0_seq1
103bp
9589 O_BomoEE18631_complete:A_BomoEE_comp69474_c0_seq2
2188bp
 PREDICTED:_activating_signal_cointegrator_1_complex_subunit_3_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006281 P DNA repair
GO:0006307 P DNA dealkylation involved in DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0008283 P cell population proliferation
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0043140 F 3'-5' DNA helicase activity
GO:0044822 F RNA binding
9590 O_BomoEE18632_complete:A_BomoEE_comp69474_c0_seq2
119bp
9591 O_BomoEE18633_complete:A_BomoEE_comp69474_c0_seq2
106bp
9592 O_BomoEE18634_complete:A_BomoEE_comp69474_c0_seq2
103bp
9593 O_BomoEE18635_5prime_partial:A_BomoEE_comp69477_c0_seq1
124bp
9594 O_BomoEE18636_complete:A_BomoEE_comp69479_c0_seq1
990bp
 PREDICTED:_uncharacterized_protein_LOC106130566_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0004679 F AMP-activated protein kinase activity
GO:0004862 F cAMP-dependent protein kinase inhibitor activity
GO:0005524 F ATP binding
GO:0005615 C extracellular space
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0005977 P glycogen metabolic process
GO:0006110 P regulation of glycolytic process
GO:0006468 P protein phosphorylation
GO:0006469 P negative regulation of protein kinase activity
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0007005 P mitochondrion organization
GO:0008603 F cAMP-dependent protein kinase regulator activity
GO:0008607 F phosphorylase kinase regulator activity
GO:0010800 P positive regulation of peptidyl-threonine phosphorylation
GO:0016208 F AMP binding
GO:0019217 P regulation of fatty acid metabolic process
GO:0019901 F protein kinase binding
GO:0030295 F protein kinase activator activity
GO:0031588 C nucleotide-activated protein kinase complex
GO:0032147 P activation of protein kinase activity
GO:0035556 P intracellular signal transduction
GO:0043531 F ADP binding
GO:0045860 P positive regulation of protein kinase activity
GO:0050790 P regulation of catalytic activity
GO:0061024 P membrane organization
GO:0071901 P negative regulation of protein serine/threonine kinase activity
9595 O_BomoEE18637_complete:A_BomoEE_comp69479_c0_seq2
990bp
 PREDICTED:_uncharacterized_protein_LOC106130566_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0004679 F AMP-activated protein kinase activity
GO:0004862 F cAMP-dependent protein kinase inhibitor activity
GO:0005524 F ATP binding
GO:0005615 C extracellular space
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0005977 P glycogen metabolic process
GO:0006110 P regulation of glycolytic process
GO:0006468 P protein phosphorylation
GO:0006469 P negative regulation of protein kinase activity
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0007005 P mitochondrion organization
GO:0008603 F cAMP-dependent protein kinase regulator activity
GO:0008607 F phosphorylase kinase regulator activity
GO:0010800 P positive regulation of peptidyl-threonine phosphorylation
GO:0016208 F AMP binding
GO:0019217 P regulation of fatty acid metabolic process
GO:0019901 F protein kinase binding
GO:0030295 F protein kinase activator activity
GO:0031588 C nucleotide-activated protein kinase complex
GO:0032147 P activation of protein kinase activity
GO:0035556 P intracellular signal transduction
GO:0043531 F ADP binding
GO:0045860 P positive regulation of protein kinase activity
GO:0050790 P regulation of catalytic activity
GO:0061024 P membrane organization
GO:0071901 P negative regulation of protein serine/threonine kinase activity
9596 O_BomoEE18638_complete:A_BomoEE_comp69479_c0_seq5
990bp
 PREDICTED:_uncharacterized_protein_LOC106130566_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0004679 F AMP-activated protein kinase activity
GO:0004862 F cAMP-dependent protein kinase inhibitor activity
GO:0005524 F ATP binding
GO:0005615 C extracellular space
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0005977 P glycogen metabolic process
GO:0006110 P regulation of glycolytic process
GO:0006468 P protein phosphorylation
GO:0006469 P negative regulation of protein kinase activity
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0007005 P mitochondrion organization
GO:0008603 F cAMP-dependent protein kinase regulator activity
GO:0008607 F phosphorylase kinase regulator activity
GO:0010800 P positive regulation of peptidyl-threonine phosphorylation
GO:0016208 F AMP binding
GO:0019217 P regulation of fatty acid metabolic process
GO:0019901 F protein kinase binding
GO:0030295 F protein kinase activator activity
GO:0031588 C nucleotide-activated protein kinase complex
GO:0032147 P activation of protein kinase activity
GO:0035556 P intracellular signal transduction
GO:0043531 F ADP binding
GO:0045860 P positive regulation of protein kinase activity
GO:0050790 P regulation of catalytic activity
GO:0061024 P membrane organization
GO:0071901 P negative regulation of protein serine/threonine kinase activity
9597 O_BomoEE18639_3prime_partial:A_BomoEE_comp69482_c0_seq1
1242bp
 PREDICTED:_myosin-I_heavy_chain-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001726 C ruffle
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0006810 P transport
GO:0007165 P signal transduction
GO:0008152 P metabolic process
GO:0008360 P regulation of cell shape
GO:0016020 C membrane
GO:0016459 C myosin complex
GO:0030027 C lamellipodium
GO:0030705 P cytoskeleton-dependent intracellular transport
GO:0030898 F microfilament motor activity
GO:0031527 C filopodium membrane
GO:0032433 C filopodium tip
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0051489 P regulation of filopodium assembly
GO:0060002 F plus-end directed microfilament motor activity
9598 O_BomoEE1863_complete:A_BomoEE_comp32942_c0_seq1
205bp
 hypothetical_protein_KGM_16540_[Danaus_plexippus]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0007474 P imaginal disc-derived wing vein specification
GO:0010468 P regulation of gene expression
GO:0035098 C ESC/E(Z) complex
GO:0035102 C PRC1 complex
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0051301 P cell division
GO:0060429 P epithelium development
9599 O_BomoEE18640_complete:A_BomoEE_comp69482_c0_seq1
172bp
9600 O_BomoEE18641_complete:A_BomoEE_comp69482_c0_seq1
167bp
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