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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9241 O_BomoEE18318_5prime_partial:A_BomoEE_comp69347_c0_seq3
107bp
9242 O_BomoEE18319_3prime_partial:A_BomoEE_comp69347_c0_seq4
247bp
 PREDICTED:_uncharacterized_protein_LOC101744317_isoform_X2_[Bombyx_mori]
9243 O_BomoEE1831_complete:A_BomoEE_comp32838_c0_seq1
483bp
 PREDICTED:_PH_domain-containing_protein_DDB_G0287875-like_[Amyelois_transitella]
GO:0000226 P microtubule cytoskeleton organization
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0008283 P cell population proliferation
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0021987 P cerebral cortex development
GO:0030496 C midbody
GO:0045111 C intermediate filament cytoskeleton
GO:0051301 P cell division
9244 O_BomoEE18320_5prime_partial:A_BomoEE_comp69347_c0_seq4
107bp
9245 O_BomoEE18321_complete:A_BomoEE_comp69348_c0_seq2
449bp
 PREDICTED:_UDP-glucuronic_acid_decarboxylase_1_isoform_X1_[Papilio_polytes]
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0032580 C Golgi cisterna membrane
GO:0033320 P UDP-D-xylose biosynthetic process
GO:0042803 F protein homodimerization activity
GO:0048040 F UDP-glucuronate decarboxylase activity
GO:0051262 P protein tetramerization
GO:0070062 C extracellular exosome
GO:0070403 F NAD+ binding
9246 O_BomoEE18322_3prime_partial:A_BomoEE_comp69351_c0_seq1
480bp
 PREDICTED:_translation_initiation_factor_eIF-2B_subunit_delta_[Bombyx_mori]
GO:0001541 P ovarian follicle development
GO:0003743 F translation initiation factor activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005851 C eukaryotic translation initiation factor 2B complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0014003 P oligodendrocyte development
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0042552 P myelination
GO:0043547 P positive regulation of GTPase activity
GO:0044237 P cellular metabolic process
GO:0045947 P negative regulation of translational initiation
GO:0046523 F S-methyl-5-thioribose-1-phosphate isomerase activity
GO:0051716 P cellular response to stimulus
9247 O_BomoEE18323_5prime_partial:A_BomoEE_comp69351_c0_seq1
138bp
9248 O_BomoEE18324_complete:A_BomoEE_comp69351_c0_seq1
103bp
9249 O_BomoEE18325_3prime_partial:A_BomoEE_comp69351_c0_seq2
569bp
 PREDICTED:_translation_initiation_factor_eIF-2B_subunit_delta_[Bombyx_mori]
GO:0001541 P ovarian follicle development
GO:0003743 F translation initiation factor activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005851 C eukaryotic translation initiation factor 2B complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0014003 P oligodendrocyte development
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0042552 P myelination
GO:0043547 P positive regulation of GTPase activity
GO:0044237 P cellular metabolic process
GO:0045947 P negative regulation of translational initiation
GO:0046523 F S-methyl-5-thioribose-1-phosphate isomerase activity
GO:0051716 P cellular response to stimulus
9250 O_BomoEE18326_5prime_partial:A_BomoEE_comp69351_c0_seq2
138bp
9251 O_BomoEE18327_complete:A_BomoEE_comp69351_c0_seq2
103bp
9252 O_BomoEE18328_3prime_partial:A_BomoEE_comp69351_c0_seq3
586bp
 PREDICTED:_translation_initiation_factor_eIF-2B_subunit_delta_[Bombyx_mori]
GO:0001541 P ovarian follicle development
GO:0003743 F translation initiation factor activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005851 C eukaryotic translation initiation factor 2B complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0014003 P oligodendrocyte development
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0042552 P myelination
GO:0043547 P positive regulation of GTPase activity
GO:0044237 P cellular metabolic process
GO:0045947 P negative regulation of translational initiation
GO:0046523 F S-methyl-5-thioribose-1-phosphate isomerase activity
GO:0051716 P cellular response to stimulus
9253 O_BomoEE18329_5prime_partial:A_BomoEE_comp69351_c0_seq3
138bp
9254 O_BomoEE1832_3prime_partial:A_BomoEE_comp32840_c0_seq1
311bp
 Vacuolar_protein_sorting-associated_protein_13A_[Acromyrmex_echinatior]
9255 O_BomoEE18330_complete:A_BomoEE_comp69351_c0_seq3
103bp
9256 O_BomoEE18331_complete:A_BomoEE_comp69352_c0_seq1
161bp
 PREDICTED:_testican-2_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005539 F glycosaminoglycan binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0007165 P signal transduction
GO:0010811 P positive regulation of cell-substrate adhesion
GO:0019800 P peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan
GO:0030198 P extracellular matrix organization
GO:0050840 F extracellular matrix binding
9257 O_BomoEE18332_complete:A_BomoEE_comp69352_c0_seq2
415bp
 PREDICTED:_testican-2_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005539 F glycosaminoglycan binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0007165 P signal transduction
GO:0010811 P positive regulation of cell-substrate adhesion
GO:0019800 P peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan
GO:0030198 P extracellular matrix organization
GO:0050840 F extracellular matrix binding
9258 O_BomoEE18333_complete:A_BomoEE_comp69352_c0_seq2
113bp
9259 O_BomoEE18334_complete:A_BomoEE_comp69352_c0_seq3
446bp
 PREDICTED:_testican-2_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005539 F glycosaminoglycan binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0007165 P signal transduction
GO:0010811 P positive regulation of cell-substrate adhesion
GO:0019800 P peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan
GO:0030198 P extracellular matrix organization
GO:0050840 F extracellular matrix binding
9260 O_BomoEE18335_complete:A_BomoEE_comp69352_c0_seq3
113bp
9261 O_BomoEE18336_complete:A_BomoEE_comp69352_c0_seq4
192bp
 PREDICTED:_testican-2_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005539 F glycosaminoglycan binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0007165 P signal transduction
GO:0010811 P positive regulation of cell-substrate adhesion
GO:0019800 P peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan
GO:0030198 P extracellular matrix organization
GO:0050840 F extracellular matrix binding
9262 O_BomoEE18337_complete:A_BomoEE_comp69358_c0_seq1
386bp
 PREDICTED:_4-hydroxyphenylpyruvate_dioxygenase-like_[Amyelois_transitella]
GO:0003868 F 4-hydroxyphenylpyruvate dioxygenase activity
GO:0006559 P L-phenylalanine catabolic process
GO:0006572 P tyrosine catabolic process
GO:0009072 P aromatic amino acid family metabolic process
GO:0016491 F oxidoreductase activity
GO:0016701 F oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
9263 O_BomoEE18338_complete:A_BomoEE_comp69358_c0_seq1
109bp
9264 O_BomoEE18339_5prime_partial:A_BomoEE_comp69360_c1_seq1
104bp
 PREDICTED:_uncharacterized_protein_LOC103311285_[Acyrthosiphon_pisum]
9265 O_BomoEE1833_5prime_partial:A_BomoEE_comp32840_c0_seq1
301bp
9266 O_BomoEE18340_3prime_partial:A_BomoEE_comp69361_c0_seq1
970bp
 PREDICTED:_zinc_finger_MYM-type_protein_4_[Bombyx_mori]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007010 P cytoskeleton organization
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0022604 P regulation of cell morphogenesis
GO:0046872 F metal ion binding
9267 O_BomoEE18341_complete:A_BomoEE_comp69361_c0_seq1
109bp
9268 O_BomoEE18342_3prime_partial:A_BomoEE_comp69361_c0_seq2
970bp
 PREDICTED:_zinc_finger_MYM-type_protein_4_[Bombyx_mori]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007010 P cytoskeleton organization
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0022604 P regulation of cell morphogenesis
GO:0046872 F metal ion binding
9269 O_BomoEE18343_complete:A_BomoEE_comp69361_c0_seq2
109bp
9270 O_BomoEE18344_3prime_partial:A_BomoEE_comp69361_c0_seq3
970bp
 PREDICTED:_zinc_finger_MYM-type_protein_4_[Bombyx_mori]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007010 P cytoskeleton organization
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0022604 P regulation of cell morphogenesis
GO:0046872 F metal ion binding
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