SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/95730
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
91 O_BomoEE10082_complete:A_BomoEE_comp63910_c0_seq1
129bp
92 O_BomoEE10083_complete:A_BomoEE_comp63910_c0_seq1
126bp
93 O_BomoEE10084_complete:A_BomoEE_comp63910_c0_seq1
108bp
94 O_BomoEE10085_complete:A_BomoEE_comp63910_c0_seq2
1820bp
 PREDICTED:_nuclear_pore_complex_protein_Nup214_isoform_X2_[Bombyx_mori]
GO:0000059 P obsolete protein import into nucleus, docking
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005875 C microtubule associated complex
GO:0006810 P transport
GO:0007184 P regulation of SMAD protein signal transduction
GO:0015031 P protein transport
GO:0046826 P negative regulation of protein export from nucleus
GO:0051028 P mRNA transport
GO:0090204 P protein localization to nuclear pore
95 O_BomoEE10086_complete:A_BomoEE_comp63910_c0_seq2
192bp
96 O_BomoEE10087_complete:A_BomoEE_comp63910_c0_seq2
129bp
97 O_BomoEE10088_complete:A_BomoEE_comp63910_c0_seq2
126bp
98 O_BomoEE10089_complete:A_BomoEE_comp63910_c0_seq2
108bp
99 O_BomoEE1008_5prime_partial:A_BomoEE_comp22379_c0_seq1
253bp
 trehalase_1B_[Biston_betularia]
GO:0003824 F catalytic activity
GO:0004555 F alpha,alpha-trehalase activity
GO:0005886 C plasma membrane
GO:0005991 P trehalose metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016323 C basolateral plasma membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
100 O_BomoEE10090_complete:A_BomoEE_comp63912_c0_seq1
423bp
 PREDICTED:_arrestin_domain-containing_protein_3_[Amyelois_transitella]
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0031410 C cytoplasmic vesicle
101 O_BomoEE10091_complete:A_BomoEE_comp63912_c0_seq1
107bp
102 O_BomoEE10092_complete:A_BomoEE_comp63912_c0_seq3
329bp
 PREDICTED:_arrestin_domain-containing_protein_3_[Papilio_machaon]
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005886 C plasma membrane
GO:0016020 C membrane
103 O_BomoEE10093_complete:A_BomoEE_comp63912_c0_seq3
135bp
 hypothetical_protein_KGM_21106_[Danaus_plexippus]
104 O_BomoEE10094_3prime_partial:A_BomoEE_comp63915_c0_seq1
121bp
 PREDICTED:_unconventional_myosin-Ia-like_isoform_X2_[Papilio_machaon]
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0006892 P post-Golgi vesicle-mediated transport
GO:0007015 P actin filament organization
GO:0008152 P metabolic process
GO:0010008 C endosome membrane
GO:0016459 C myosin complex
GO:0030048 P actin filament-based movement
GO:0030175 C filopodium
GO:0030898 F microfilament motor activity
GO:0032588 C trans-Golgi network membrane
GO:0048471 C perinuclear region of cytoplasm
GO:0051015 F actin filament binding
GO:0051017 P actin filament bundle assembly
GO:0070062 C extracellular exosome
GO:0071944 C cell periphery
105 O_BomoEE10095_3prime_partial:A_BomoEE_comp63915_c0_seq2
121bp
 PREDICTED:_unconventional_myosin-Ia-like_isoform_X2_[Papilio_machaon]
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0006892 P post-Golgi vesicle-mediated transport
GO:0007015 P actin filament organization
GO:0008152 P metabolic process
GO:0010008 C endosome membrane
GO:0016459 C myosin complex
GO:0030048 P actin filament-based movement
GO:0030175 C filopodium
GO:0030898 F microfilament motor activity
GO:0032588 C trans-Golgi network membrane
GO:0048471 C perinuclear region of cytoplasm
GO:0051015 F actin filament binding
GO:0051017 P actin filament bundle assembly
GO:0070062 C extracellular exosome
GO:0071944 C cell periphery
106 O_BomoEE10096_3prime_partial:A_BomoEE_comp63915_c0_seq4
121bp
 PREDICTED:_unconventional_myosin-Ia-like_isoform_X2_[Papilio_machaon]
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0006892 P post-Golgi vesicle-mediated transport
GO:0007015 P actin filament organization
GO:0008152 P metabolic process
GO:0010008 C endosome membrane
GO:0016459 C myosin complex
GO:0030048 P actin filament-based movement
GO:0030175 C filopodium
GO:0030898 F microfilament motor activity
GO:0032588 C trans-Golgi network membrane
GO:0048471 C perinuclear region of cytoplasm
GO:0051015 F actin filament binding
GO:0051017 P actin filament bundle assembly
GO:0070062 C extracellular exosome
GO:0071944 C cell periphery
107 O_BomoEE10097_complete:A_BomoEE_comp63916_c0_seq2
127bp
108 O_BomoEE10098_complete:A_BomoEE_comp63916_c0_seq3
149bp
109 O_BomoEE10099_5prime_partial:A_BomoEE_comp63921_c1_seq1
250bp
 PREDICTED:_calcium-dependent_secretion_activator_isoform_X2_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0007269 P neurotransmitter secretion
GO:0008021 C synaptic vesicle
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016079 P synaptic vesicle exocytosis
GO:0016192 P vesicle-mediated transport
GO:0019233 P sensory perception of pain
GO:0030054 C cell junction
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035249 P synaptic transmission, glutamatergic
GO:0045202 C synapse
GO:0045956 P positive regulation of calcium ion-dependent exocytosis
GO:0046872 F metal ion binding
110 O_BomoEE1009_internal:A_BomoEE_comp22400_c0_seq1
261bp
 PREDICTED:_glucose_dehydrogenase_[FAD,_quinone]-like_isoform_X2_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
111 O_BomoEE100_internal:A_BomoEE_comp1886_c0_seq1
133bp
 PREDICTED:_uncharacterized_protein_MG328-like_[Papilio_polytes]
112 O_BomoEE10100_3prime_partial:A_BomoEE_comp63923_c0_seq1
362bp
 PREDICTED:_poly(rC)-binding_protein_3_isoform_X2_[Papilio_polytes]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001227 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
GO:1990829 F C-rich single-stranded DNA binding
113 O_BomoEE10101_complete:A_BomoEE_comp63923_c0_seq1
109bp
114 O_BomoEE10102_3prime_partial:A_BomoEE_comp63923_c0_seq3
367bp
 PREDICTED:_poly(rC)-binding_protein_3_isoform_X2_[Papilio_polytes]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016071 P mRNA metabolic process
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
115 O_BomoEE10103_complete:A_BomoEE_comp63923_c0_seq3
109bp
116 O_BomoEE10104_complete:A_BomoEE_comp63924_c1_seq1
215bp
 PREDICTED:_phosphatidylinositol_N-acetylglucosaminyltransferase_subunit_H_isoform_X2_[Bombyx_mori]
GO:0000506 C glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0006506 P GPI anchor biosynthetic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0017176 F phosphatidylinositol N-acetylglucosaminyltransferase activity
117 O_BomoEE10105_complete:A_BomoEE_comp63925_c0_seq1
941bp
 PREDICTED:_methionine--tRNA_ligase,_cytoplasmic_isoform_X3_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004825 F methionine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006431 P methionyl-tRNA aminoacylation
GO:0016874 F ligase activity
118 O_BomoEE10106_complete:A_BomoEE_comp63925_c0_seq1
102bp
119 O_BomoEE10107_3prime_partial:A_BomoEE_comp63931_c0_seq1
132bp
 monoacylglycerol_acyl_transferase_[Manduca_sexta]
GO:0003846 F 2-acylglycerol O-acyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006071 P glycerol metabolic process
GO:0006629 P lipid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0019432 P triglyceride biosynthetic process
120 O_BomoEE10108_3prime_partial:A_BomoEE_comp63931_c0_seq2
292bp
 monoacylglycerol_acyl_transferase_[Manduca_sexta]
GO:0003846 F 2-acylglycerol O-acyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006071 P glycerol metabolic process
GO:0006629 P lipid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0019432 P triglyceride biosynthetic process
previous next from show/95730

- SilkBase 1999-2023 -