SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/95730
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8911 O_BomoEE18020_3prime_partial:A_BomoEE_comp69210_c0_seq4
489bp
 PREDICTED:_transmembrane_and_coiled-coil_domains_protein_2_isoform_X2_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
8912 O_BomoEE18021_complete:A_BomoEE_comp69210_c0_seq4
137bp
8913 O_BomoEE18022_3prime_partial:A_BomoEE_comp69210_c0_seq5
483bp
 PREDICTED:_transmembrane_and_coiled-coil_domains_protein_2_isoform_X3_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
8914 O_BomoEE18023_complete:A_BomoEE_comp69210_c0_seq5
137bp
8915 O_BomoEE18024_internal:A_BomoEE_comp69210_c0_seq6
221bp
 PREDICTED:_transmembrane_and_coiled-coil_domains_protein_2_isoform_X2_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
8916 O_BomoEE18025_complete:A_BomoEE_comp69214_c0_seq1
481bp
 PREDICTED:_calcium_uptake_protein_1,_mitochondrial-like_isoform_X2_[Papilio_polytes]
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0046872 F metal ion binding
GO:0051561 P positive regulation of mitochondrial calcium ion concentration
8917 O_BomoEE18026_complete:A_BomoEE_comp69214_c0_seq4
356bp
 PREDICTED:_calcium_uptake_protein_1,_mitochondrial-like_[Amyelois_transitella]
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0046872 F metal ion binding
GO:0051561 P positive regulation of mitochondrial calcium ion concentration
8918 O_BomoEE18027_complete:A_BomoEE_comp69214_c0_seq5
403bp
 PREDICTED:_calcium_uptake_protein_1,_mitochondrial-like_[Amyelois_transitella]
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0046872 F metal ion binding
GO:0051561 P positive regulation of mitochondrial calcium ion concentration
8919 O_BomoEE18028_complete:A_BomoEE_comp69214_c0_seq6
128bp
 PREDICTED:_calcium_uptake_protein_1,_mitochondrial-like_isoform_X1_[Papilio_polytes]
8920 O_BomoEE18029_complete:A_BomoEE_comp69216_c0_seq1
353bp
 uncharacterized_protein_LOC692518_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016717 F oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
GO:0017105 F acyl-CoA delta11-desaturase activity
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
8921 O_BomoEE1802_complete:A_BomoEE_comp32780_c0_seq1
533bp
 PREDICTED:_uncharacterized_protein_LOC101742999_[Bombyx_mori]
GO:0000790 C chromatin
GO:0002039 F p53 binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007599 P hemostasis
GO:0007611 P learning or memory
GO:0007626 P locomotory behavior
GO:0008270 F zinc ion binding
GO:0008298 P intracellular mRNA localization
GO:0010609 P mRNA localization resulting in posttranscriptional regulation of gene expression
GO:0030220 P platelet formation
GO:0030425 C dendrite
GO:0035855 P megakaryocyte development
GO:0042995 C cell projection
GO:0043025 C neuronal cell body
GO:0044822 F RNA binding
GO:0045600 P positive regulation of fat cell differentiation
GO:0046872 F metal ion binding
GO:0070889 P platelet alpha granule organization
GO:0072332 P intrinsic apoptotic signaling pathway by p53 class mediator
GO:1902164 P positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
GO:1902166 P negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:2000765 P regulation of cytoplasmic translation
8922 O_BomoEE18030_complete:A_BomoEE_comp69216_c0_seq2
353bp
 uncharacterized_protein_LOC692518_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016717 F oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
GO:0017105 F acyl-CoA delta11-desaturase activity
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
8923 O_BomoEE18031_complete:A_BomoEE_comp69216_c0_seq4
353bp
 uncharacterized_protein_LOC692518_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016717 F oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
GO:0017105 F acyl-CoA delta11-desaturase activity
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
8924 O_BomoEE18032_complete:A_BomoEE_comp69218_c0_seq1
332bp
 PREDICTED:_histone-lysine_N-methyltransferase_setd3_[Plutella_xylostella]
GO:0000790 C chromatin
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0016049 P cell growth
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018022 P peptidyl-lysine methylation
GO:0018023 P peptidyl-lysine trimethylation
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0018026 P peptidyl-lysine monomethylation
GO:0018027 P peptidyl-lysine dimethylation
GO:0032259 P methylation
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
8925 O_BomoEE18033_complete:A_BomoEE_comp69218_c0_seq1
109bp
 hypothetical_protein_ALC57_04897_[Trachymyrmex_cornetzi]
8926 O_BomoEE18034_complete:A_BomoEE_comp69218_c0_seq2
495bp
 PREDICTED:_histone-lysine_N-methyltransferase_setd3-like_[Amyelois_transitella]
GO:0000790 C chromatin
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0016049 P cell growth
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018022 P peptidyl-lysine methylation
GO:0018023 P peptidyl-lysine trimethylation
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0018026 P peptidyl-lysine monomethylation
GO:0018027 P peptidyl-lysine dimethylation
GO:0032259 P methylation
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
8927 O_BomoEE18035_complete:A_BomoEE_comp69218_c0_seq2
109bp
 hypothetical_protein_ALC57_04897_[Trachymyrmex_cornetzi]
8928 O_BomoEE18036_complete:A_BomoEE_comp69218_c0_seq5
137bp
 PREDICTED:_histone-lysine_N-methyltransferase_setd3-like_[Amyelois_transitella]
GO:0000790 C chromatin
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0010452 P histone H3-K36 methylation
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018022 P peptidyl-lysine methylation
GO:0018023 P peptidyl-lysine trimethylation
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0018026 P peptidyl-lysine monomethylation
GO:0018027 P peptidyl-lysine dimethylation
GO:0032259 P methylation
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
8929 O_BomoEE18037_5prime_partial:A_BomoEE_comp69224_c0_seq1
192bp
 PREDICTED:_zinc_finger_protein_16-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
8930 O_BomoEE18038_complete:A_BomoEE_comp69224_c0_seq2
133bp
 PREDICTED:_protein_krueppel-like_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
8931 O_BomoEE18039_3prime_partial:A_BomoEE_comp69225_c0_seq3
697bp
 PREDICTED:_uncharacterized_protein_LOC101742722_[Bombyx_mori]
8932 O_BomoEE1803_complete:A_BomoEE_comp32782_c0_seq1
149bp
 PREDICTED:_male-enhanced_antigen_1_[Amyelois_transitella]
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0030154 P cell differentiation
8933 O_BomoEE18040_complete:A_BomoEE_comp69225_c0_seq3
122bp
8934 O_BomoEE18041_3prime_partial:A_BomoEE_comp69225_c0_seq4
662bp
 PREDICTED:_uncharacterized_protein_LOC101742722_[Bombyx_mori]
8935 O_BomoEE18042_complete:A_BomoEE_comp69225_c0_seq4
122bp
8936 O_BomoEE18043_internal:A_BomoEE_comp69227_c0_seq1
665bp
 PREDICTED:_neuroglian_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0005918 C septate junction
GO:0005919 C pleated septate junction
GO:0005923 C bicellular tight junction
GO:0007155 P cell adhesion
GO:0007158 P neuron cell-cell adhesion
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007409 P axonogenesis
GO:0007560 P imaginal disc morphogenesis
GO:0008045 P motor neuron axon guidance
GO:0008049 P male courtship behavior
GO:0008050 P female courtship behavior
GO:0008366 P axon ensheathment
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016319 P mushroom body development
GO:0016328 C lateral plasma membrane
GO:0019991 P septate junction assembly
GO:0021682 P nerve maturation
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0035011 P melanotic encapsulation of foreign target
GO:0035151 P regulation of tube size, open tracheal system
GO:0035230 C cytoneme
GO:0045924 P regulation of female receptivity
GO:0048036 P central complex development
GO:0048675 P axon extension
GO:0048812 P neuron projection morphogenesis
GO:0048813 P dendrite morphogenesis
GO:0050808 P synapse organization
GO:0060857 P establishment of glial blood-brain barrier
GO:0061343 P cell adhesion involved in heart morphogenesis
GO:0072499 P photoreceptor cell axon guidance
8937 O_BomoEE18044_5prime_partial:A_BomoEE_comp69227_c0_seq1
400bp
8938 O_BomoEE18045_5prime_partial:A_BomoEE_comp69227_c0_seq1
226bp
8939 O_BomoEE18046_5prime_partial:A_BomoEE_comp69227_c0_seq2
674bp
 PREDICTED:_neuroglian_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0005918 C septate junction
GO:0005919 C pleated septate junction
GO:0005923 C bicellular tight junction
GO:0007155 P cell adhesion
GO:0007158 P neuron cell-cell adhesion
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007409 P axonogenesis
GO:0007560 P imaginal disc morphogenesis
GO:0008045 P motor neuron axon guidance
GO:0008049 P male courtship behavior
GO:0008050 P female courtship behavior
GO:0008366 P axon ensheathment
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016319 P mushroom body development
GO:0016328 C lateral plasma membrane
GO:0019991 P septate junction assembly
GO:0021682 P nerve maturation
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0035011 P melanotic encapsulation of foreign target
GO:0035151 P regulation of tube size, open tracheal system
GO:0035230 C cytoneme
GO:0045924 P regulation of female receptivity
GO:0048036 P central complex development
GO:0048675 P axon extension
GO:0048812 P neuron projection morphogenesis
GO:0048813 P dendrite morphogenesis
GO:0050808 P synapse organization
GO:0060857 P establishment of glial blood-brain barrier
GO:0061343 P cell adhesion involved in heart morphogenesis
GO:0072499 P photoreceptor cell axon guidance
8940 O_BomoEE18047_complete:A_BomoEE_comp69227_c0_seq2
347bp
previous next from show/95730

- SilkBase 1999-2023 -