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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
871 O_BomoEE10785_complete:A_BomoEE_comp64509_c0_seq3
146bp
872 O_BomoEE10786_complete:A_BomoEE_comp64509_c0_seq3
104bp
873 O_BomoEE10787_5prime_partial:A_BomoEE_comp64513_c1_seq1
376bp
 PREDICTED:_methyltransferase-like_protein_isoform_X1_[Papilio_machaon]
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0008757 F S-adenosylmethionine-dependent methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
874 O_BomoEE10788_complete:A_BomoEE_comp64513_c1_seq2
320bp
 PREDICTED:_methyltransferase-like_protein_isoform_X2_[Papilio_machaon]
GO:0008168 F methyltransferase activity
GO:0016427 F tRNA (cytosine) methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
875 O_BomoEE10789_complete:A_BomoEE_comp64520_c0_seq1
462bp
 fez1_[Bombyx_mori]
GO:0000910 P cytokinesis
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016055 P Wnt signaling pathway
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0030496 C midbody
GO:0051013 P microtubule severing
GO:0051168 P nuclear export
GO:0051255 P spindle midzone assembly
GO:0051301 P cell division
876 O_BomoEE1078_complete:A_BomoEE_comp24021_c0_seq1
289bp
 PREDICTED:_uncharacterized_protein_LOC105842431_isoform_X1_[Bombyx_mori]
877 O_BomoEE10790_complete:A_BomoEE_comp64520_c0_seq1
109bp
878 O_BomoEE10791_complete:A_BomoEE_comp64521_c0_seq2
231bp
 Copia_protein_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004190 F aspartic-type endopeptidase activity
GO:0005524 F ATP binding
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
879 O_BomoEE10792_5prime_partial:A_BomoEE_comp64521_c0_seq2
126bp
 Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
880 O_BomoEE10793_3prime_partial:A_BomoEE_comp64523_c0_seq1
211bp
 PREDICTED:_homeotic_protein_female_sterile_isoform_X2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0004672 F protein kinase activity
GO:0005634 C nucleus
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006468 P protein phosphorylation
GO:0007275 P multicellular organism development
GO:0007362 P terminal region determination
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0045892 P negative regulation of transcription, DNA-templated
881 O_BomoEE10794_5prime_partial:A_BomoEE_comp64523_c0_seq1
102bp
882 O_BomoEE10795_complete:A_BomoEE_comp64526_c0_seq1
378bp
 Annexin_IX_isoform_B_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0005938 C cell cortex
GO:0010797 P regulation of multivesicular body size involved in endosome transport
GO:0012505 C endomembrane system
GO:0030011 P maintenance of cell polarity
GO:0030507 F spectrin binding
GO:0032509 P endosome transport via multivesicular body sorting pathway
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0061467 P protein localization to basolateral plasma membrane
883 O_BomoEE10796_complete:A_BomoEE_comp64526_c0_seq1
265bp
 PREDICTED:_DNA_repair_protein_RAD51_homolog_3_[Amyelois_transitella]
GO:0000150 F DNA strand exchange activity
GO:0000166 F nucleotide binding
GO:0000400 F four-way junction DNA binding
GO:0000722 P telomere maintenance via recombination
GO:0000724 P double-strand break repair via homologous recombination
GO:0000730 P DNA recombinase assembly
GO:0000794 C condensed nuclear chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005657 C replication fork
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007066 P female meiosis sister chromatid cohesion
GO:0007131 P reciprocal meiotic recombination
GO:0007141 P male meiosis I
GO:0007283 P spermatogenesis
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008821 F crossover junction endodeoxyribonuclease activity
GO:0010212 P response to ionizing radiation
GO:0010971 P positive regulation of G2/M transition of mitotic cell cycle
GO:0033063 C Rad51B-Rad51C-Rad51D-XRCC2 complex
GO:0033065 C Rad51C-XRCC3 complex
GO:0042148 P strand invasion
GO:0048471 C perinuclear region of cytoplasm
GO:0048476 C Holliday junction resolvase complex
884 O_BomoEE10797_complete:A_BomoEE_comp64526_c0_seq2
378bp
 PREDICTED:_annexin_IX_isoform_X1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0005938 C cell cortex
GO:0010797 P regulation of multivesicular body size involved in endosome transport
GO:0012505 C endomembrane system
GO:0030011 P maintenance of cell polarity
GO:0030507 F spectrin binding
GO:0032509 P endosome transport via multivesicular body sorting pathway
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0061467 P protein localization to basolateral plasma membrane
885 O_BomoEE10798_complete:A_BomoEE_comp64526_c0_seq2
265bp
 PREDICTED:_DNA_repair_protein_RAD51_homolog_3_[Amyelois_transitella]
GO:0000150 F DNA strand exchange activity
GO:0000166 F nucleotide binding
GO:0000400 F four-way junction DNA binding
GO:0000722 P telomere maintenance via recombination
GO:0000724 P double-strand break repair via homologous recombination
GO:0000730 P DNA recombinase assembly
GO:0000794 C condensed nuclear chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005657 C replication fork
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007066 P female meiosis sister chromatid cohesion
GO:0007131 P reciprocal meiotic recombination
GO:0007141 P male meiosis I
GO:0007283 P spermatogenesis
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008821 F crossover junction endodeoxyribonuclease activity
GO:0010212 P response to ionizing radiation
GO:0010971 P positive regulation of G2/M transition of mitotic cell cycle
GO:0033063 C Rad51B-Rad51C-Rad51D-XRCC2 complex
GO:0033065 C Rad51C-XRCC3 complex
GO:0042148 P strand invasion
GO:0048471 C perinuclear region of cytoplasm
GO:0048476 C Holliday junction resolvase complex
886 O_BomoEE10799_complete:A_BomoEE_comp64526_c0_seq3
378bp
 PREDICTED:_annexin_IX_isoform_X1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0005938 C cell cortex
GO:0010797 P regulation of multivesicular body size involved in endosome transport
GO:0012505 C endomembrane system
GO:0030011 P maintenance of cell polarity
GO:0030507 F spectrin binding
GO:0032509 P endosome transport via multivesicular body sorting pathway
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0061467 P protein localization to basolateral plasma membrane
887 O_BomoEE1079_complete:A_BomoEE_comp24069_c0_seq1
108bp
888 O_BomoEE107_complete:A_BomoEE_comp1970_c0_seq2
167bp
 PREDICTED:_dynein_heavy_chain_3,_axonemal_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001539 P cilium or flagellum-dependent cell motility
GO:0003341 P cilium movement
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005509 F calcium ion binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005858 C axonemal dynein complex
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007018 P microtubule-based movement
GO:0008152 P metabolic process
GO:0016887 F ATP hydrolysis activity
GO:0030286 C dynein complex
GO:0036156 C inner dynein arm
GO:0036159 P inner dynein arm assembly
GO:0042995 C cell projection
889 O_BomoEE10800_complete:A_BomoEE_comp64526_c0_seq3
265bp
 PREDICTED:_DNA_repair_protein_RAD51_homolog_3_[Amyelois_transitella]
GO:0000150 F DNA strand exchange activity
GO:0000166 F nucleotide binding
GO:0000400 F four-way junction DNA binding
GO:0000722 P telomere maintenance via recombination
GO:0000724 P double-strand break repair via homologous recombination
GO:0000730 P DNA recombinase assembly
GO:0000794 C condensed nuclear chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005657 C replication fork
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007066 P female meiosis sister chromatid cohesion
GO:0007131 P reciprocal meiotic recombination
GO:0007141 P male meiosis I
GO:0007283 P spermatogenesis
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008821 F crossover junction endodeoxyribonuclease activity
GO:0010212 P response to ionizing radiation
GO:0010971 P positive regulation of G2/M transition of mitotic cell cycle
GO:0033063 C Rad51B-Rad51C-Rad51D-XRCC2 complex
GO:0033065 C Rad51C-XRCC3 complex
GO:0042148 P strand invasion
GO:0048471 C perinuclear region of cytoplasm
GO:0048476 C Holliday junction resolvase complex
890 O_BomoEE10801_complete:A_BomoEE_comp64526_c0_seq4
379bp
 Annexin_IX_isoform_A_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0005938 C cell cortex
GO:0010797 P regulation of multivesicular body size involved in endosome transport
GO:0012505 C endomembrane system
GO:0030011 P maintenance of cell polarity
GO:0030507 F spectrin binding
GO:0032509 P endosome transport via multivesicular body sorting pathway
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0061467 P protein localization to basolateral plasma membrane
891 O_BomoEE10802_complete:A_BomoEE_comp64526_c0_seq4
265bp
 PREDICTED:_DNA_repair_protein_RAD51_homolog_3_[Amyelois_transitella]
GO:0000150 F DNA strand exchange activity
GO:0000166 F nucleotide binding
GO:0000400 F four-way junction DNA binding
GO:0000722 P telomere maintenance via recombination
GO:0000724 P double-strand break repair via homologous recombination
GO:0000730 P DNA recombinase assembly
GO:0000794 C condensed nuclear chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005657 C replication fork
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007066 P female meiosis sister chromatid cohesion
GO:0007131 P reciprocal meiotic recombination
GO:0007141 P male meiosis I
GO:0007283 P spermatogenesis
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008821 F crossover junction endodeoxyribonuclease activity
GO:0010212 P response to ionizing radiation
GO:0010971 P positive regulation of G2/M transition of mitotic cell cycle
GO:0033063 C Rad51B-Rad51C-Rad51D-XRCC2 complex
GO:0033065 C Rad51C-XRCC3 complex
GO:0042148 P strand invasion
GO:0048471 C perinuclear region of cytoplasm
GO:0048476 C Holliday junction resolvase complex
892 O_BomoEE10803_complete:A_BomoEE_comp64527_c0_seq1
1095bp
 PREDICTED:_dystroglycan_[Amyelois_transitella]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0042383 C sarcolemma
GO:0043236 F laminin binding
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
893 O_BomoEE10804_complete:A_BomoEE_comp64527_c0_seq1
121bp
894 O_BomoEE10805_complete:A_BomoEE_comp64527_c0_seq1
117bp
895 O_BomoEE10806_complete:A_BomoEE_comp64527_c0_seq1
106bp
896 O_BomoEE10807_complete:A_BomoEE_comp64527_c0_seq2
1130bp
 PREDICTED:_dystroglycan_[Amyelois_transitella]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0042383 C sarcolemma
GO:0043236 F laminin binding
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
897 O_BomoEE10808_complete:A_BomoEE_comp64527_c0_seq2
121bp
898 O_BomoEE10809_complete:A_BomoEE_comp64527_c0_seq2
117bp
899 O_BomoEE1080_complete:A_BomoEE_comp24069_c0_seq2
108bp
900 O_BomoEE10810_complete:A_BomoEE_comp64527_c0_seq2
116bp
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