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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7261 O_BomoEE16536_complete:A_BomoEE_comp68550_c0_seq1
109bp
 PREDICTED:_uncharacterized_protein_LOC103309021_[Acyrthosiphon_pisum]
7262 O_BomoEE16537_5prime_partial:A_BomoEE_comp68550_c1_seq1
137bp
 hypothetical_protein_RR46_09115_[Papilio_xuthus]
7263 O_BomoEE16538_complete:A_BomoEE_comp68552_c0_seq1
680bp
 PREDICTED:_chromatin-remodeling_complex_ATPase_chain_Iswi_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000790 C chromatin
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005700 C polytene chromosome
GO:0006325 P chromatin organization
GO:0006333 P chromatin assembly or disassembly
GO:0006334 P nucleosome assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007517 P muscle organ development
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008134 F transcription factor binding
GO:0008623 C CHRAC
GO:0016568 P chromatin organization
GO:0016584 P nucleosome positioning
GO:0016589 C NURF complex
GO:0016590 C ACF complex
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0016887 F ATP hydrolysis activity
GO:0019233 P sensory perception of pain
GO:0031010 C ISWI-type complex
GO:0031213 C RSF complex
GO:0031491 F nucleosome binding
GO:0032508 P DNA duplex unwinding
GO:0035060 C brahma complex
GO:0035063 P nuclear speck organization
GO:0035076 P ecdysone receptor-mediated signaling pathway
GO:0042752 P regulation of circadian rhythm
GO:0042766 P nucleosome mobilization
GO:0043044 P chromatin remodeling
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048813 P dendrite morphogenesis
GO:0070615 F ATP-dependent chromatin remodeler activity
7264 O_BomoEE16539_complete:A_BomoEE_comp68552_c0_seq1
345bp
 PREDICTED:_chromatin-remodeling_complex_ATPase_chain_Iswi_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000733 P obsolete DNA strand renaturation
GO:0000790 C chromatin
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007420 P brain development
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0016568 P chromatin organization
GO:0016589 C NURF complex
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0016887 F ATP hydrolysis activity
GO:0030182 P neuron differentiation
GO:0031491 F nucleosome binding
GO:0036310 F ATP-dependent DNA/DNA annealing activity
GO:0043044 P chromatin remodeling
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0070615 F ATP-dependent chromatin remodeler activity
GO:0090537 C CERF complex
GO:2000177 P regulation of neural precursor cell proliferation
7265 O_BomoEE1653_5prime_partial:A_BomoEE_comp32309_c0_seq1
182bp
7266 O_BomoEE16540_complete:A_BomoEE_comp68552_c0_seq2
1027bp
 PREDICTED:_chromatin-remodeling_complex_ATPase_chain_Iswi_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000790 C chromatin
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005700 C polytene chromosome
GO:0006325 P chromatin organization
GO:0006333 P chromatin assembly or disassembly
GO:0006334 P nucleosome assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007517 P muscle organ development
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008134 F transcription factor binding
GO:0008623 C CHRAC
GO:0016568 P chromatin organization
GO:0016584 P nucleosome positioning
GO:0016589 C NURF complex
GO:0016590 C ACF complex
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0016887 F ATP hydrolysis activity
GO:0019233 P sensory perception of pain
GO:0031010 C ISWI-type complex
GO:0031213 C RSF complex
GO:0031491 F nucleosome binding
GO:0032508 P DNA duplex unwinding
GO:0035060 C brahma complex
GO:0035063 P nuclear speck organization
GO:0035076 P ecdysone receptor-mediated signaling pathway
GO:0042752 P regulation of circadian rhythm
GO:0042766 P nucleosome mobilization
GO:0043044 P chromatin remodeling
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048813 P dendrite morphogenesis
GO:0070615 F ATP-dependent chromatin remodeler activity
7267 O_BomoEE16541_complete:A_BomoEE_comp68555_c0_seq1
370bp
 PREDICTED:_neugrin_[Amyelois_transitella]
GO:0005576 C extracellular region
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008150 P biological_process
GO:0030154 P cell differentiation
GO:0044822 F RNA binding
7268 O_BomoEE16542_complete:A_BomoEE_comp68555_c0_seq1
130bp
7269 O_BomoEE16543_3prime_partial:A_BomoEE_comp68556_c0_seq1
1679bp
 PREDICTED:_unconventional_myosin-XVIIIa,_partial_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005856 C cytoskeleton
GO:0006259 P DNA metabolic process
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016459 C myosin complex
GO:0016477 P cell migration
GO:0016887 F ATP hydrolysis activity
GO:0031032 P actomyosin structure organization
GO:0042641 C actomyosin
GO:0043066 P negative regulation of apoptotic process
GO:0043531 F ADP binding
GO:0044822 F RNA binding
GO:0048194 P Golgi vesicle budding
GO:0050714 P positive regulation of protein secretion
GO:0051015 F actin filament binding
GO:0090161 P Golgi ribbon formation
GO:0090164 P asymmetric Golgi ribbon formation
7270 O_BomoEE16544_complete:A_BomoEE_comp68556_c0_seq1
153bp
7271 O_BomoEE16545_complete:A_BomoEE_comp68556_c0_seq1
152bp
7272 O_BomoEE16546_complete:A_BomoEE_comp68556_c0_seq1
130bp
7273 O_BomoEE16547_5prime_partial:A_BomoEE_comp68556_c0_seq1
127bp
7274 O_BomoEE16548_5prime_partial:A_BomoEE_comp68556_c0_seq1
103bp
7275 O_BomoEE16549_internal:A_BomoEE_comp68558_c0_seq1
139bp
7276 O_BomoEE1654_3prime_partial:A_BomoEE_comp32309_c0_seq2
250bp
 F-box/LRR-repeat_protein_20_[Papilio_machaon]
GO:0005737 C cytoplasm
7277 O_BomoEE16550_5prime_partial:A_BomoEE_comp68558_c0_seq1
112bp
 Uncharacterized_protein_OBRU01_03726,_partial_[Operophtera_brumata]
GO:0005783 C endoplasmic reticulum
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034975 P protein folding in endoplasmic reticulum
GO:0072546 C EMC complex
7278 O_BomoEE16551_5prime_partial:A_BomoEE_comp68558_c0_seq2
145bp
7279 O_BomoEE16552_5prime_partial:A_BomoEE_comp68558_c0_seq2
112bp
 Uncharacterized_protein_OBRU01_03726,_partial_[Operophtera_brumata]
GO:0005783 C endoplasmic reticulum
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034975 P protein folding in endoplasmic reticulum
GO:0072546 C EMC complex
7280 O_BomoEE16553_5prime_partial:A_BomoEE_comp68558_c0_seq3
140bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_CYLD_isoform_X3_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005881 C cytoplasmic microtubule
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007346 P regulation of mitotic cell cycle
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0019901 F protein kinase binding
GO:0030496 C midbody
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0036064 C ciliary basal body
GO:0036459 F thiol-dependent deubiquitinase
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0042995 C cell projection
GO:0045581 P negative regulation of T cell differentiation
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0061578 F Lys63-specific deubiquitinase activity
GO:0070064 F proline-rich region binding
GO:0070266 P necroptotic process
GO:0070507 P regulation of microtubule cytoskeleton organization
GO:0070536 P protein K63-linked deubiquitination
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0097542 C ciliary tip
GO:1901026 P ripoptosome assembly involved in necroptotic process
GO:1902017 P regulation of cilium assembly
GO:2001238 P positive regulation of extrinsic apoptotic signaling pathway
GO:2001242 P regulation of intrinsic apoptotic signaling pathway
7281 O_BomoEE16554_complete:A_BomoEE_comp68560_c0_seq1
576bp
 PREDICTED:_uncharacterized_protein_LOC101745283_isoform_X2_[Bombyx_mori]
7282 O_BomoEE16555_complete:A_BomoEE_comp68560_c0_seq3
576bp
 PREDICTED:_uncharacterized_protein_LOC101745283_isoform_X2_[Bombyx_mori]
7283 O_BomoEE16556_complete:A_BomoEE_comp68560_c0_seq4
540bp
 PREDICTED:_uncharacterized_protein_LOC101745283_isoform_X2_[Bombyx_mori]
7284 O_BomoEE16557_complete:A_BomoEE_comp68560_c0_seq5
604bp
 PREDICTED:_uncharacterized_protein_LOC101745283_isoform_X2_[Bombyx_mori]
7285 O_BomoEE16558_complete:A_BomoEE_comp68560_c0_seq8
540bp
 PREDICTED:_uncharacterized_protein_LOC101745283_isoform_X2_[Bombyx_mori]
7286 O_BomoEE16559_complete:A_BomoEE_comp68560_c0_seq12
604bp
 PREDICTED:_uncharacterized_protein_LOC101745283_isoform_X2_[Bombyx_mori]
7287 O_BomoEE1655_5prime_partial:A_BomoEE_comp32309_c0_seq2
213bp
7288 O_BomoEE16560_complete:A_BomoEE_comp68560_c0_seq15
576bp
 PREDICTED:_uncharacterized_protein_LOC101745283_isoform_X2_[Bombyx_mori]
7289 O_BomoEE16561_complete:A_BomoEE_comp68560_c0_seq16
497bp
 PREDICTED:_uncharacterized_protein_LOC101745283_isoform_X2_[Bombyx_mori]
7290 O_BomoEE16562_complete:A_BomoEE_comp68560_c0_seq17
604bp
 PREDICTED:_uncharacterized_protein_LOC101745283_isoform_X2_[Bombyx_mori]
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