SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/95730
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7051 O_BomoEE16347_complete:A_BomoEE_comp68482_c0_seq4
120bp
 PREDICTED:_kynurenine_formamidase-like_[Bombyx_mori]
GO:0004061 F arylformamidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006569 P tryptophan catabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0019441 P tryptophan catabolic process to kynurenine
GO:0034354 P 'de novo' NAD biosynthetic process from tryptophan
7052 O_BomoEE16348_complete:A_BomoEE_comp68482_c0_seq5
297bp
 PREDICTED:_kynurenine_formamidase-like_[Bombyx_mori]
GO:0004061 F arylformamidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006569 P tryptophan catabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0019441 P tryptophan catabolic process to kynurenine
GO:0034354 P 'de novo' NAD biosynthetic process from tryptophan
7053 O_BomoEE16349_complete:A_BomoEE_comp68482_c0_seq6
297bp
 PREDICTED:_kynurenine_formamidase-like_[Bombyx_mori]
GO:0004061 F arylformamidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006569 P tryptophan catabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0019441 P tryptophan catabolic process to kynurenine
GO:0034354 P 'de novo' NAD biosynthetic process from tryptophan
7054 O_BomoEE1634_complete:A_BomoEE_comp32278_c0_seq1
116bp
7055 O_BomoEE16350_3prime_partial:A_BomoEE_comp68484_c0_seq1
133bp
7056 O_BomoEE16351_3prime_partial:A_BomoEE_comp68484_c0_seq2
133bp
7057 O_BomoEE16352_complete:A_BomoEE_comp68485_c0_seq1
768bp
 PREDICTED:_uncharacterized_protein_LOC106143543_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005730 C nucleolus
7058 O_BomoEE16353_complete:A_BomoEE_comp68485_c0_seq1
105bp
7059 O_BomoEE16354_complete:A_BomoEE_comp68486_c0_seq1
1065bp
 PREDICTED:_uncharacterized_protein_LOC106717090_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0042802 F identical protein binding
GO:0046872 F metal ion binding
7060 O_BomoEE16355_5prime_partial:A_BomoEE_comp68486_c0_seq1
105bp
7061 O_BomoEE16356_complete:A_BomoEE_comp68486_c0_seq1
101bp
7062 O_BomoEE16357_internal:A_BomoEE_comp68487_c0_seq1
131bp
7063 O_BomoEE16358_internal:A_BomoEE_comp68487_c0_seq1
131bp
7064 O_BomoEE16359_internal:A_BomoEE_comp68487_c0_seq1
131bp
 PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]
7065 O_BomoEE1635_complete:A_BomoEE_comp32280_c0_seq1
192bp
 PREDICTED:_tumor_necrosis_factor,_alpha-induced_protein_8-like_protein_2_A_[Bombyx_mori]
GO:0002376 P immune system process
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0045087 P innate immune response
GO:0050728 P negative regulation of inflammatory response
GO:0050868 P negative regulation of T cell activation
7066 O_BomoEE16360_internal:A_BomoEE_comp68487_c0_seq1
130bp
7067 O_BomoEE16361_5prime_partial:A_BomoEE_comp68487_c0_seq1
120bp
7068 O_BomoEE16362_5prime_partial:A_BomoEE_comp68487_c0_seq1
108bp
7069 O_BomoEE16363_internal:A_BomoEE_comp68487_c0_seq2
128bp
7070 O_BomoEE16364_5prime_partial:A_BomoEE_comp68487_c0_seq3
139bp
7071 O_BomoEE16365_5prime_partial:A_BomoEE_comp68487_c0_seq3
109bp
7072 O_BomoEE16366_5prime_partial:A_BomoEE_comp68487_c0_seq3
105bp
7073 O_BomoEE16367_complete:A_BomoEE_comp68490_c0_seq1
324bp
 PREDICTED:_lysosomal-associated_transmembrane_protein_isoform_X1_[Bombyx_mori]
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7074 O_BomoEE16368_complete:A_BomoEE_comp68490_c0_seq2
210bp
 PREDICTED:_lysosomal-associated_transmembrane_protein_isoform_X1_[Bombyx_mori]
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7075 O_BomoEE16369_complete:A_BomoEE_comp68490_c0_seq2
126bp
7076 O_BomoEE1636_5prime_partial:A_BomoEE_comp32284_c0_seq1
267bp
 hypothetical_protein_KGM_11568_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0016180 P snRNA processing
GO:0032039 C integrator complex
7077 O_BomoEE16370_complete:A_BomoEE_comp68490_c0_seq3
314bp
 lysosomal-associated_transmembrane_protein_[Bombyx_mori]
GO:0006810 P transport
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7078 O_BomoEE16371_complete:A_BomoEE_comp68491_c0_seq2
462bp
 PREDICTED:_E3_ubiquitin-protein_ligase_TRIM33_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030218 P erythrocyte differentiation
GO:0033333 P fin development
GO:0034243 P regulation of transcription elongation from RNA polymerase II promoter
GO:0035162 P embryonic hemopoiesis
GO:0035166 P post-embryonic hemopoiesis
GO:0046872 F metal ion binding
GO:0060215 P primitive hemopoiesis
7079 O_BomoEE16372_complete:A_BomoEE_comp68491_c0_seq2
216bp
7080 O_BomoEE16373_complete:A_BomoEE_comp68491_c0_seq2
211bp
previous next from show/95730

- SilkBase 1999-2023 -