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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6991 O_BomoEE16293_complete:A_BomoEE_comp68467_c0_seq1
274bp
 PREDICTED:_FAD-dependent_oxidoreductase_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
6992 O_BomoEE16294_complete:A_BomoEE_comp68467_c0_seq1
184bp
 PREDICTED:_transmembrane_and_coiled-coil_domain-containing_protein_1_isoform_X1_[Papilio_xuthus]
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
6993 O_BomoEE16295_complete:A_BomoEE_comp68467_c0_seq1
111bp
6994 O_BomoEE16296_complete:A_BomoEE_comp68467_c0_seq2
390bp
 PREDICTED:_FAD-dependent_oxidoreductase_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
6995 O_BomoEE16297_complete:A_BomoEE_comp68467_c0_seq2
184bp
 PREDICTED:_transmembrane_and_coiled-coil_domain-containing_protein_1_isoform_X1_[Papilio_xuthus]
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
6996 O_BomoEE16298_complete:A_BomoEE_comp68467_c0_seq2
146bp
6997 O_BomoEE16299_complete:A_BomoEE_comp68467_c0_seq3
463bp
 PREDICTED:_FAD-dependent_oxidoreductase_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
6998 O_BomoEE1629_3prime_partial:A_BomoEE_comp32275_c0_seq2
209bp
 PREDICTED:_general_vesicular_transport_factor_p115_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0007030 P Golgi organization
GO:0008565 F obsolete protein transporter activity
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0044822 F RNA binding
GO:0045056 P transcytosis
GO:0048193 P Golgi vesicle transport
GO:0048211 P Golgi vesicle docking
GO:0048280 P vesicle fusion with Golgi apparatus
GO:0048471 C perinuclear region of cytoplasm
GO:0061025 P membrane fusion
6999 O_BomoEE162_complete:A_BomoEE_comp2689_c1_seq1
151bp
 PREDICTED:_carboxypeptidase_B-like,_partial_[Diaphorina_citri]
GO:0004180 F carboxypeptidase activity
GO:0004181 F metallocarboxypeptidase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005773 C vacuole
GO:0006508 P proteolysis
GO:0007039 P protein catabolic process in the vacuole
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
7000 O_BomoEE16300_complete:A_BomoEE_comp68467_c0_seq3
184bp
 PREDICTED:_transmembrane_and_coiled-coil_domain-containing_protein_1_isoform_X1_[Papilio_xuthus]
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7001 O_BomoEE16301_complete:A_BomoEE_comp68467_c0_seq3
146bp
7002 O_BomoEE16302_complete:A_BomoEE_comp68467_c0_seq4
201bp
 PREDICTED:_FAD-dependent_oxidoreductase_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
7003 O_BomoEE16303_complete:A_BomoEE_comp68467_c0_seq4
184bp
 PREDICTED:_transmembrane_and_coiled-coil_domain-containing_protein_1_isoform_X1_[Papilio_xuthus]
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7004 O_BomoEE16304_complete:A_BomoEE_comp68467_c0_seq4
111bp
7005 O_BomoEE16305_complete:A_BomoEE_comp68467_c0_seq5
184bp
 PREDICTED:_transmembrane_and_coiled-coil_domain-containing_protein_1_isoform_X1_[Papilio_xuthus]
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7006 O_BomoEE16306_complete:A_BomoEE_comp68468_c0_seq1
122bp
7007 O_BomoEE16307_5prime_partial:A_BomoEE_comp68469_c0_seq1
122bp
 transthyretin_family_protein_[Danaus_plexippus]
GO:0006144 P purine nucleobase metabolic process
GO:0016787 F hydrolase activity
GO:0033971 F hydroxyisourate hydrolase activity
GO:0042597 C periplasmic space
7008 O_BomoEE16308_complete:A_BomoEE_comp68469_c0_seq2
693bp
 PREDICTED:_RNA-binding_protein_5-A-like_isoform_X2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0046872 F metal ion binding
7009 O_BomoEE16309_complete:A_BomoEE_comp68469_c0_seq2
135bp
7010 O_BomoEE1630_complete:A_BomoEE_comp32275_c0_seq2
147bp
7011 O_BomoEE16310_5prime_partial:A_BomoEE_comp68469_c0_seq2
122bp
 transthyretin_family_protein_[Danaus_plexippus]
GO:0006144 P purine nucleobase metabolic process
GO:0016787 F hydrolase activity
GO:0033971 F hydroxyisourate hydrolase activity
GO:0042597 C periplasmic space
7012 O_BomoEE16311_5prime_partial:A_BomoEE_comp68469_c0_seq3
122bp
 transthyretin_family_protein_[Danaus_plexippus]
GO:0006144 P purine nucleobase metabolic process
GO:0016787 F hydrolase activity
GO:0033971 F hydroxyisourate hydrolase activity
GO:0042597 C periplasmic space
7013 O_BomoEE16312_complete:A_BomoEE_comp68469_c0_seq4
693bp
 PREDICTED:_RNA-binding_protein_5-A-like_isoform_X2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0046872 F metal ion binding
7014 O_BomoEE16313_complete:A_BomoEE_comp68469_c0_seq4
135bp
7015 O_BomoEE16314_5prime_partial:A_BomoEE_comp68469_c0_seq4
122bp
 transthyretin_family_protein_[Danaus_plexippus]
GO:0006144 P purine nucleobase metabolic process
GO:0016787 F hydrolase activity
GO:0033971 F hydroxyisourate hydrolase activity
GO:0042597 C periplasmic space
7016 O_BomoEE16315_complete:A_BomoEE_comp68469_c0_seq5
693bp
 PREDICTED:_RNA-binding_protein_5-A-like_isoform_X2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0046872 F metal ion binding
7017 O_BomoEE16316_5prime_partial:A_BomoEE_comp68469_c0_seq5
122bp
 transthyretin_family_protein_[Danaus_plexippus]
GO:0006144 P purine nucleobase metabolic process
GO:0016787 F hydrolase activity
GO:0033971 F hydroxyisourate hydrolase activity
GO:0042597 C periplasmic space
7018 O_BomoEE16317_complete:A_BomoEE_comp68469_c0_seq6
693bp
 PREDICTED:_RNA-binding_protein_5-A-like_isoform_X2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0046872 F metal ion binding
7019 O_BomoEE16318_complete:A_BomoEE_comp68469_c0_seq6
135bp
7020 O_BomoEE16319_complete:A_BomoEE_comp68469_c0_seq7
693bp
 PREDICTED:_RNA-binding_protein_5-A-like_isoform_X2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0046872 F metal ion binding
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