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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6901 O_BomoEE16211_5prime_partial:A_BomoEE_comp68431_c0_seq4
181bp
6902 O_BomoEE16212_5prime_partial:A_BomoEE_comp68431_c0_seq4
179bp
6903 O_BomoEE16213_complete:A_BomoEE_comp68431_c0_seq4
102bp
6904 O_BomoEE16214_complete:A_BomoEE_comp68432_c0_seq1
417bp
 diphthamide_synthesis_protein_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0017183 P peptidyl-diphthamide biosynthetic process from peptidyl-histidine
6905 O_BomoEE16215_5prime_partial:A_BomoEE_comp68432_c2_seq1
522bp
 phenoloxidase_subunit_2_precursor_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0004503 F tyrosinase activity
GO:0005576 C extracellular region
GO:0006583 P melanin biosynthetic process from tyrosine
GO:0006952 P defense response
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0042438 P melanin biosynthetic process
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
6906 O_BomoEE16216_complete:A_BomoEE_comp68432_c2_seq1
179bp
6907 O_BomoEE16217_5prime_partial:A_BomoEE_comp68432_c2_seq2
522bp
 phenoloxidase_subunit_2_precursor_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0004503 F tyrosinase activity
GO:0005576 C extracellular region
GO:0006583 P melanin biosynthetic process from tyrosine
GO:0006952 P defense response
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0042438 P melanin biosynthetic process
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
6908 O_BomoEE16218_complete:A_BomoEE_comp68432_c2_seq2
179bp
6909 O_BomoEE16219_3prime_partial:A_BomoEE_comp68433_c0_seq1
443bp
 PREDICTED:_biotin--protein_ligase_[Bombyx_mori]
6910 O_BomoEE1621_3prime_partial:A_BomoEE_comp32267_c0_seq1
719bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_treacle_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002039 F p53 binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007155 P cell adhesion
GO:0015630 C microtubule cytoskeleton
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030155 P regulation of cell adhesion
GO:0035507 P regulation of myosin-light-chain-phosphatase activity
GO:0035556 P intracellular signal transduction
GO:0042127 P regulation of cell population proliferation
GO:0046872 F metal ion binding
GO:1901796 P regulation of signal transduction by p53 class mediator
GO:2000772 P regulation of cellular senescence
6911 O_BomoEE16220_complete:A_BomoEE_comp68433_c0_seq1
249bp
 microtubule-associated_protein_1_light_chain_3_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000421 C autophagosome membrane
GO:0000422 P autophagy of mitochondrion
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006914 P autophagy
GO:0006995 P cellular response to nitrogen starvation
GO:0008017 F microtubule binding
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016236 P macroautophagy
GO:0031090 C organelle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
6912 O_BomoEE16221_complete:A_BomoEE_comp68433_c0_seq1
193bp
 mediator_of_RNA_polymerase_II_transcription_subunit_29_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016592 C mediator complex
6913 O_BomoEE16222_3prime_partial:A_BomoEE_comp68433_c0_seq2
460bp
 PREDICTED:_biotin--protein_ligase_[Bombyx_mori]
6914 O_BomoEE16223_3prime_partial:A_BomoEE_comp68433_c0_seq3
443bp
 PREDICTED:_biotin--protein_ligase_[Bombyx_mori]
6915 O_BomoEE16224_complete:A_BomoEE_comp68433_c0_seq3
121bp
 PREDICTED:_uncharacterized_protein_LOC101746017_isoform_X1_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000421 C autophagosome membrane
GO:0000422 P autophagy of mitochondrion
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006914 P autophagy
GO:0006995 P cellular response to nitrogen starvation
GO:0008017 F microtubule binding
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016236 P macroautophagy
GO:0031090 C organelle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
6916 O_BomoEE16225_complete:A_BomoEE_comp68433_c0_seq4
193bp
 mediator_of_RNA_polymerase_II_transcription_subunit_29_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016592 C mediator complex
6917 O_BomoEE16226_5prime_partial:A_BomoEE_comp68433_c0_seq4
179bp
 microtubule-associated_protein_1_light_chain_3_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000421 C autophagosome membrane
GO:0000422 P autophagy of mitochondrion
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006914 P autophagy
GO:0006995 P cellular response to nitrogen starvation
GO:0008017 F microtubule binding
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016236 P macroautophagy
GO:0031090 C organelle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
6918 O_BomoEE16227_internal:A_BomoEE_comp68434_c0_seq2
857bp
 PREDICTED:_rootletin_[Bombyx_mori]
GO:0001917 C photoreceptor inner segment
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0008104 P protein localization
GO:0010457 P centriole-centriole cohesion
GO:0010669 P epithelial structure maintenance
GO:0015629 C actin cytoskeleton
GO:0019894 F kinesin binding
GO:0030030 P cell projection organization
GO:0032053 P ciliary basal body organization
GO:0033365 P protein localization to organelle
GO:0035253 C ciliary rootlet
GO:0045494 P photoreceptor cell maintenance
GO:0051297 P centrosome cycle
GO:0051656 P establishment of organelle localization
GO:0070062 C extracellular exosome
6919 O_BomoEE16228_3prime_partial:A_BomoEE_comp68434_c0_seq2
191bp
6920 O_BomoEE16229_complete:A_BomoEE_comp68434_c0_seq2
116bp
6921 O_BomoEE1622_complete:A_BomoEE_comp32267_c0_seq1
263bp
6922 O_BomoEE16230_3prime_partial:A_BomoEE_comp68434_c0_seq3
211bp
 PREDICTED:_rootletin_[Bombyx_mori]
GO:0001917 C photoreceptor inner segment
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0008104 P protein localization
GO:0010457 P centriole-centriole cohesion
GO:0010669 P epithelial structure maintenance
GO:0015629 C actin cytoskeleton
GO:0019894 F kinesin binding
GO:0030030 P cell projection organization
GO:0032053 P ciliary basal body organization
GO:0033365 P protein localization to organelle
GO:0035253 C ciliary rootlet
GO:0045494 P photoreceptor cell maintenance
GO:0051297 P centrosome cycle
GO:0051656 P establishment of organelle localization
GO:0070062 C extracellular exosome
6923 O_BomoEE16231_5prime_partial:A_BomoEE_comp68434_c0_seq3
161bp
6924 O_BomoEE16232_complete:A_BomoEE_comp68434_c0_seq3
101bp
6925 O_BomoEE16233_internal:A_BomoEE_comp68434_c0_seq5
549bp
 PREDICTED:_rootletin_[Amyelois_transitella]
GO:0001917 C photoreceptor inner segment
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0008104 P protein localization
GO:0010457 P centriole-centriole cohesion
GO:0010669 P epithelial structure maintenance
GO:0015629 C actin cytoskeleton
GO:0019894 F kinesin binding
GO:0030030 P cell projection organization
GO:0032053 P ciliary basal body organization
GO:0033365 P protein localization to organelle
GO:0035253 C ciliary rootlet
GO:0045494 P photoreceptor cell maintenance
GO:0051297 P centrosome cycle
GO:0051656 P establishment of organelle localization
GO:0070062 C extracellular exosome
6926 O_BomoEE16234_5prime_partial:A_BomoEE_comp68434_c0_seq5
161bp
6927 O_BomoEE16235_complete:A_BomoEE_comp68434_c0_seq5
116bp
6928 O_BomoEE16236_3prime_partial:A_BomoEE_comp68434_c0_seq6
357bp
 PREDICTED:_rootletin_[Bombyx_mori]
GO:0001917 C photoreceptor inner segment
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0008104 P protein localization
GO:0010457 P centriole-centriole cohesion
GO:0010669 P epithelial structure maintenance
GO:0015629 C actin cytoskeleton
GO:0019894 F kinesin binding
GO:0030030 P cell projection organization
GO:0032053 P ciliary basal body organization
GO:0033365 P protein localization to organelle
GO:0035253 C ciliary rootlet
GO:0045494 P photoreceptor cell maintenance
GO:0051297 P centrosome cycle
GO:0051656 P establishment of organelle localization
GO:0070062 C extracellular exosome
6929 O_BomoEE16237_3prime_partial:A_BomoEE_comp68434_c0_seq6
191bp
6930 O_BomoEE16238_3prime_partial:A_BomoEE_comp68434_c0_seq7
519bp
 PREDICTED:_rootletin_[Bombyx_mori]
GO:0001917 C photoreceptor inner segment
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0008104 P protein localization
GO:0010457 P centriole-centriole cohesion
GO:0010669 P epithelial structure maintenance
GO:0015629 C actin cytoskeleton
GO:0019894 F kinesin binding
GO:0030030 P cell projection organization
GO:0032053 P ciliary basal body organization
GO:0033365 P protein localization to organelle
GO:0035253 C ciliary rootlet
GO:0045494 P photoreceptor cell maintenance
GO:0051297 P centrosome cycle
GO:0051656 P establishment of organelle localization
GO:0070062 C extracellular exosome
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