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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6841 O_BomoEE16158_complete:A_BomoEE_comp68412_c0_seq1
212bp
 putative_coiled-coil_domain-containing_protein_124_[Danaus_plexippus]
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0030496 C midbody
GO:0051301 P cell division
6842 O_BomoEE16159_complete:A_BomoEE_comp68412_c0_seq2
459bp
 diptheria_toxin_resistance_protein_[Bombyx_mori]
GO:0017183 P peptidyl-diphthamide biosynthetic process from peptidyl-histidine
6843 O_BomoEE1615_complete:A_BomoEE_comp32256_c0_seq2
175bp
 carotenoid-binding_protein_isoform_1_[Bombyx_mori]
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031902 C late endosome membrane
6844 O_BomoEE16160_complete:A_BomoEE_comp68412_c0_seq2
212bp
 putative_coiled-coil_domain-containing_protein_124_[Danaus_plexippus]
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0030496 C midbody
GO:0051301 P cell division
6845 O_BomoEE16161_complete:A_BomoEE_comp68413_c0_seq1
1682bp
 clathrin_heavy_chain_[Bombyx_mori]
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005802 C trans-Golgi network
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0005938 C cell cortex
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007291 P sperm individualization
GO:0007594 P puparial adhesion
GO:0008021 C synaptic vesicle
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0016020 C membrane
GO:0016079 P synaptic vesicle exocytosis
GO:0016183 P synaptic vesicle coating
GO:0016192 P vesicle-mediated transport
GO:0030125 C clathrin vesicle coat
GO:0030129 C clathrin coat of synaptic vesicle
GO:0030130 C clathrin coat of trans-Golgi network vesicle
GO:0030132 C clathrin coat of coated pit
GO:0030135 C coated vesicle
GO:0030136 C clathrin-coated vesicle
GO:0030141 C secretory granule
GO:0030198 P extracellular matrix organization
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032051 F clathrin light chain binding
GO:0033227 P dsRNA transport
GO:0033363 P secretory granule organization
GO:0035002 P liquid clearance, open tracheal system
GO:0035159 P regulation of tube length, open tracheal system
GO:0040008 P regulation of growth
GO:0045451 P pole plasm oskar mRNA localization
GO:0045747 P positive regulation of Notch signaling pathway
GO:0045807 P positive regulation of endocytosis
GO:0046667 P compound eye retinal cell programmed cell death
GO:0048471 C perinuclear region of cytoplasm
GO:0048749 P compound eye development
GO:0071439 C clathrin complex
6846 O_BomoEE16162_complete:A_BomoEE_comp68413_c0_seq1
164bp
6847 O_BomoEE16163_complete:A_BomoEE_comp68414_c0_seq1
103bp
6848 O_BomoEE16164_5prime_partial:A_BomoEE_comp68414_c0_seq1
102bp
 PREDICTED:_interference_hedgehog-like_[Amyelois_transitella]
6849 O_BomoEE16165_complete:A_BomoEE_comp68414_c1_seq1
107bp
6850 O_BomoEE16166_complete:A_BomoEE_comp68415_c0_seq1
586bp
 PREDICTED:_X-linked_retinitis_pigmentosa_GTPase_regulator-like_isoform_X1_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0007601 P visual perception
GO:0030030 P cell projection organization
GO:0036064 C ciliary basal body
GO:0036126 C sperm flagellum
GO:0042073 P intraciliary transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0043547 P positive regulation of GTPase activity
GO:0050896 P response to stimulus
6851 O_BomoEE16167_complete:A_BomoEE_comp68415_c0_seq1
140bp
 Eukaryotic_translation_initiation_factor_4E_[Papilio_machaon]
6852 O_BomoEE16168_3prime_partial:A_BomoEE_comp68415_c0_seq1
104bp
6853 O_BomoEE16169_complete:A_BomoEE_comp68415_c0_seq2
637bp
 PREDICTED:_X-linked_retinitis_pigmentosa_GTPase_regulator-like_isoform_X1_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0007601 P visual perception
GO:0030030 P cell projection organization
GO:0036064 C ciliary basal body
GO:0036126 C sperm flagellum
GO:0042073 P intraciliary transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0043547 P positive regulation of GTPase activity
GO:0050896 P response to stimulus
6854 O_BomoEE1616_complete:A_BomoEE_comp32259_c0_seq1
513bp
 PREDICTED:_nucleosomal_histone_kinase_1_isoform_X2_[Bombyx_mori]
GO:0000070 P mitotic sister chromatid segregation
GO:0000166 F nucleotide binding
GO:0000785 C chromatin
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007126 P meiotic cell cycle
GO:0007130 P synaptonemal complex assembly
GO:0007143 P female meiotic nuclear division
GO:0008360 P regulation of cell shape
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016568 P chromatin organization
GO:0016572 P histone phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0018107 P peptidyl-threonine phosphorylation
GO:0022008 P neurogenesis
GO:0030717 P oocyte karyosome formation
GO:0035184 F histone threonine kinase activity
GO:0035405 P histone-threonine phosphorylation
GO:0036098 P male germ-line stem cell population maintenance
GO:0036099 P female germ-line stem cell population maintenance
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
GO:0097150 P neuronal stem cell population maintenance
GO:2001020 P regulation of response to DNA damage stimulus
6855 O_BomoEE16170_complete:A_BomoEE_comp68415_c0_seq2
140bp
 Eukaryotic_translation_initiation_factor_4E_[Papilio_machaon]
6856 O_BomoEE16171_complete:A_BomoEE_comp68415_c0_seq2
125bp
6857 O_BomoEE16172_3prime_partial:A_BomoEE_comp68415_c0_seq2
104bp
6858 O_BomoEE16173_complete:A_BomoEE_comp68415_c0_seq3
371bp
 PREDICTED:_X-linked_retinitis_pigmentosa_GTPase_regulator-like_isoform_X1_[Bombyx_mori]
6859 O_BomoEE16174_complete:A_BomoEE_comp68415_c0_seq3
140bp
 Eukaryotic_translation_initiation_factor_4E_[Papilio_machaon]
6860 O_BomoEE16175_3prime_partial:A_BomoEE_comp68415_c0_seq3
104bp
6861 O_BomoEE16176_complete:A_BomoEE_comp68415_c0_seq4
469bp
 PREDICTED:_X-linked_retinitis_pigmentosa_GTPase_regulator-like_isoform_X1_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0007601 P visual perception
GO:0030030 P cell projection organization
GO:0036064 C ciliary basal body
GO:0036126 C sperm flagellum
GO:0042073 P intraciliary transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0043547 P positive regulation of GTPase activity
GO:0050896 P response to stimulus
6862 O_BomoEE16177_complete:A_BomoEE_comp68415_c0_seq4
140bp
 Eukaryotic_translation_initiation_factor_4E_[Papilio_machaon]
6863 O_BomoEE16178_3prime_partial:A_BomoEE_comp68415_c0_seq4
104bp
6864 O_BomoEE16179_5prime_partial:A_BomoEE_comp68422_c0_seq1
131bp
6865 O_BomoEE1617_complete:A_BomoEE_comp32259_c0_seq1
106bp
6866 O_BomoEE16180_internal:A_BomoEE_comp68422_c0_seq2
388bp
 PREDICTED:_kinesin-like_protein_KIF21A_isoform_X5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0007018 P microtubule-based movement
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0016887 F ATP hydrolysis activity
6867 O_BomoEE16181_5prime_partial:A_BomoEE_comp68422_c0_seq2
254bp
6868 O_BomoEE16182_5prime_partial:A_BomoEE_comp68422_c0_seq2
214bp
6869 O_BomoEE16183_3prime_partial:A_BomoEE_comp68422_c0_seq2
104bp
6870 O_BomoEE16184_internal:A_BomoEE_comp68422_c0_seq3
367bp
 PREDICTED:_kinesin-like_protein_KIF21B_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0007018 P microtubule-based movement
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0016887 F ATP hydrolysis activity
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