SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/95730
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
661 O_BomoEE10596_complete:A_BomoEE_comp64337_c0_seq2
282bp
 PREDICTED:_UPF0692_protein_CG33108_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
662 O_BomoEE10597_complete:A_BomoEE_comp64340_c0_seq1
267bp
 PREDICTED:_von_Willebrand_factor_A_domain-containing_protein_9_[Papilio_polytes]
663 O_BomoEE10598_complete:A_BomoEE_comp64340_c0_seq1
117bp
664 O_BomoEE10599_complete:A_BomoEE_comp64340_c0_seq2
400bp
 PREDICTED:_von_Willebrand_factor_A_domain-containing_protein_9_[Amyelois_transitella]
665 O_BomoEE1059_internal:A_BomoEE_comp23751_c0_seq1
99bp
 PREDICTED:_retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
666 O_BomoEE105_complete:A_BomoEE_comp1970_c0_seq1
129bp
 PREDICTED:_dynein_heavy_chain_3,_axonemal_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003341 P cilium movement
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005509 F calcium ion binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005858 C axonemal dynein complex
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007018 P microtubule-based movement
GO:0008152 P metabolic process
GO:0016887 F ATP hydrolysis activity
GO:0030286 C dynein complex
GO:0042995 C cell projection
667 O_BomoEE10600_complete:A_BomoEE_comp64340_c0_seq2
109bp
668 O_BomoEE10601_complete:A_BomoEE_comp64340_c0_seq3
267bp
 PREDICTED:_von_Willebrand_factor_A_domain-containing_protein_9_[Papilio_polytes]
669 O_BomoEE10602_complete:A_BomoEE_comp64340_c0_seq3
211bp
 hypothetical_protein_KGM_19553_[Danaus_plexippus]
670 O_BomoEE10603_complete:A_BomoEE_comp64340_c0_seq3
148bp
671 O_BomoEE10604_complete:A_BomoEE_comp64340_c0_seq4
189bp
 hypothetical_protein_KGM_19553_[Danaus_plexippus]
672 O_BomoEE10605_complete:A_BomoEE_comp64340_c0_seq4
151bp
673 O_BomoEE10606_complete:A_BomoEE_comp64340_c0_seq5
519bp
 hypothetical_protein_KGM_19553_[Danaus_plexippus]
674 O_BomoEE10607_complete:A_BomoEE_comp64340_c0_seq5
148bp
675 O_BomoEE10608_complete:A_BomoEE_comp64343_c0_seq1
526bp
 fatty-acyl_CoA_reductase_3_[Ostrinia_nubilalis]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006629 P lipid metabolic process
GO:0008611 P ether lipid biosynthetic process
GO:0010025 P wax biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0035336 P long-chain fatty-acyl-CoA metabolic process
GO:0050062 F long-chain-fatty-acyl-CoA reductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
676 O_BomoEE10609_3prime_partial:A_BomoEE_comp64349_c0_seq1
403bp
 PREDICTED:_histone_acetyltransferase_KAT7_[Bombyx_mori]
677 O_BomoEE1060_internal:A_BomoEE_comp23761_c0_seq1
99bp
678 O_BomoEE10610_complete:A_BomoEE_comp64349_c0_seq1
175bp
679 O_BomoEE10611_complete:A_BomoEE_comp64350_c0_seq1
462bp
 PREDICTED:_spatzle-like_protein_isoform_X1_[Bombyx_mori]
680 O_BomoEE10612_complete:A_BomoEE_comp64350_c0_seq1
228bp
681 O_BomoEE10613_complete:A_BomoEE_comp64350_c0_seq1
106bp
682 O_BomoEE10614_complete:A_BomoEE_comp64352_c0_seq1
640bp
 PREDICTED:_sodium-coupled_monocarboxylate_transporter_1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006915 P apoptotic process
GO:0008028 F monocarboxylic acid transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015718 P monocarboxylic acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0022803 F passive transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
683 O_BomoEE10615_complete:A_BomoEE_comp64352_c0_seq1
147bp
684 O_BomoEE10616_complete:A_BomoEE_comp64352_c0_seq1
103bp
685 O_BomoEE10617_complete:A_BomoEE_comp64355_c0_seq1
507bp
 PREDICTED:_beta-1,4-glucuronyltransferase_1_[Papilio_machaon]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0008532 F N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity
GO:0015020 F glucuronosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030311 P poly-N-acetyllactosamine biosynthetic process
GO:0035269 P protein O-linked mannosylation
GO:0046872 F metal ion binding
GO:0048747 P muscle cell development
686 O_BomoEE10618_complete:A_BomoEE_comp64355_c0_seq1
146bp
687 O_BomoEE10619_complete:A_BomoEE_comp64355_c0_seq1
105bp
688 O_BomoEE1061_internal:A_BomoEE_comp23761_c0_seq1
99bp
prolyl_aminopeptidase_[Propionibacterium_acnes_HL078PA1]
GO:0004177 F aminopeptidase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
689 O_BomoEE10620_complete:A_BomoEE_comp64356_c0_seq1
191bp
 inosine_triphosphatase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005737 C cytoplasm
GO:0009117 P nucleotide metabolic process
GO:0009143 P nucleoside triphosphate catabolic process
GO:0009204 P deoxyribonucleoside triphosphate catabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0047429 F nucleoside-triphosphate diphosphatase activity
690 O_BomoEE10621_complete:A_BomoEE_comp64357_c0_seq1
131bp
 polyprotein_[Operophtera_brumata]
previous next from show/95730

- SilkBase 1999-2023 -