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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6541 O_BomoEE15889_complete:A_BomoEE_comp68309_c0_seq6
101bp
6542 O_BomoEE1588_complete:A_BomoEE_comp32211_c0_seq2
122bp
6543 O_BomoEE15890_complete:A_BomoEE_comp68310_c0_seq1
105bp
6544 O_BomoEE15891_internal:A_BomoEE_comp68311_c0_seq1
111bp
 PREDICTED:_dynein_heavy_chain_3,_axonemal_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001539 P cilium or flagellum-dependent cell motility
GO:0003341 P cilium movement
GO:0003351 P epithelial cilium movement involved in extracellular fluid movement
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005858 C axonemal dynein complex
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007018 P microtubule-based movement
GO:0008152 P metabolic process
GO:0009612 P response to mechanical stimulus
GO:0016887 F ATP hydrolysis activity
GO:0030286 C dynein complex
GO:0030317 P flagellated sperm motility
GO:0036126 C sperm flagellum
GO:0036156 C inner dynein arm
GO:0036159 P inner dynein arm assembly
GO:0042995 C cell projection
GO:0060294 P cilium movement involved in cell motility
6545 O_BomoEE15892_complete:A_BomoEE_comp68311_c0_seq2
109bp
 PREDICTED:_dynein_heavy_chain_3,_axonemal_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007018 P microtubule-based movement
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0030286 C dynein complex
GO:0036156 C inner dynein arm
GO:0042995 C cell projection
6546 O_BomoEE15893_5prime_partial:A_BomoEE_comp68311_c0_seq3
174bp
 PREDICTED:_dynein_heavy_chain_3,_axonemal_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001539 P cilium or flagellum-dependent cell motility
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005858 C axonemal dynein complex
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007018 P microtubule-based movement
GO:0008152 P metabolic process
GO:0030286 C dynein complex
GO:0042995 C cell projection
6547 O_BomoEE15894_complete:A_BomoEE_comp68311_c0_seq3
109bp
 PREDICTED:_dynein_heavy_chain_3,_axonemal_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007018 P microtubule-based movement
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0030286 C dynein complex
GO:0036156 C inner dynein arm
GO:0042995 C cell projection
6548 O_BomoEE15895_5prime_partial:A_BomoEE_comp68311_c0_seq4
246bp
 PREDICTED:_dynein_heavy_chain_3,_axonemal_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001539 P cilium or flagellum-dependent cell motility
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005858 C axonemal dynein complex
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007018 P microtubule-based movement
GO:0008152 P metabolic process
GO:0030286 C dynein complex
GO:0042995 C cell projection
6549 O_BomoEE15896_complete:A_BomoEE_comp68317_c0_seq1
415bp
 PREDICTED:_poly(U)-binding-splicing_factor_half_pint_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001558 P regulation of cell growth
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0008266 F poly(U) RNA binding
GO:0008380 P RNA splicing
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0043234 C protein-containing complex
GO:0048477 P oogenesis
GO:0051726 P regulation of cell cycle
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
6550 O_BomoEE15897_complete:A_BomoEE_comp68317_c0_seq1
164bp
 hypothetical_protein_ALC62_13146_[Cyphomyrmex_costatus]
6551 O_BomoEE15898_complete:A_BomoEE_comp68317_c0_seq2
164bp
 hypothetical_protein_ALC62_13146_[Cyphomyrmex_costatus]
6552 O_BomoEE15899_complete:A_BomoEE_comp68317_c0_seq2
155bp
 Poly(U)-binding-splicing_factor_half_pint,_partial_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001558 P regulation of cell growth
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0008266 F poly(U) RNA binding
GO:0008380 P RNA splicing
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0043234 C protein-containing complex
GO:0048477 P oogenesis
GO:0051726 P regulation of cell cycle
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
6553 O_BomoEE1589_complete:A_BomoEE_comp32211_c0_seq2
105bp
6554 O_BomoEE158_complete:A_BomoEE_comp2607_c0_seq2
125bp
 PREDICTED:_uncharacterized_protein_LOC105841746_isoform_X5_[Bombyx_mori]
6555 O_BomoEE15900_complete:A_BomoEE_comp68317_c0_seq3
451bp
 PREDICTED:_poly(U)-binding-splicing_factor_half_pint_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
6556 O_BomoEE15901_complete:A_BomoEE_comp68317_c0_seq3
164bp
 hypothetical_protein_ALC62_13146_[Cyphomyrmex_costatus]
6557 O_BomoEE15902_complete:A_BomoEE_comp68317_c0_seq4
451bp
 PREDICTED:_poly(U)-binding-splicing_factor_half_pint_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
6558 O_BomoEE15903_complete:A_BomoEE_comp68317_c0_seq4
164bp
 hypothetical_protein_ALC62_13146_[Cyphomyrmex_costatus]
6559 O_BomoEE15904_complete:A_BomoEE_comp68317_c0_seq5
164bp
 hypothetical_protein_ALC62_13146_[Cyphomyrmex_costatus]
6560 O_BomoEE15905_complete:A_BomoEE_comp68317_c0_seq5
155bp
 Poly(U)-binding-splicing_factor_half_pint,_partial_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001558 P regulation of cell growth
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0008266 F poly(U) RNA binding
GO:0008380 P RNA splicing
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0043234 C protein-containing complex
GO:0048477 P oogenesis
GO:0051726 P regulation of cell cycle
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
6561 O_BomoEE15906_complete:A_BomoEE_comp68317_c0_seq6
415bp
 PREDICTED:_poly(U)-binding-splicing_factor_half_pint_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001558 P regulation of cell growth
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0008266 F poly(U) RNA binding
GO:0008380 P RNA splicing
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0043234 C protein-containing complex
GO:0048477 P oogenesis
GO:0051726 P regulation of cell cycle
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
6562 O_BomoEE15907_complete:A_BomoEE_comp68317_c0_seq6
164bp
 hypothetical_protein_ALC62_13146_[Cyphomyrmex_costatus]
6563 O_BomoEE15908_complete:A_BomoEE_comp68320_c0_seq1
176bp
 PREDICTED:_dynein_heavy_chain,_cytoplasmic-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000776 C kinetochore
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005868 C cytoplasmic dynein complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005938 C cell cortex
GO:0006886 P intracellular protein transport
GO:0007018 P microtubule-based movement
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007098 P centrosome cycle
GO:0007279 P pole cell formation
GO:0007282 P cystoblast division
GO:0007294 P germarium-derived oocyte fate determination
GO:0007298 P border follicle cell migration
GO:0007301 P female germline ring canal formation
GO:0007312 P oocyte nucleus migration involved in oocyte dorsal/ventral axis specification
GO:0007349 P cellularization
GO:0007405 P neuroblast proliferation
GO:0008088 P axo-dendritic transport
GO:0008090 P retrograde axonal transport
GO:0008298 P intracellular mRNA localization
GO:0008569 F minus-end-directed microtubule motor activity
GO:0016319 P mushroom body development
GO:0016887 F ATP hydrolysis activity
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0030286 C dynein complex
GO:0030529 C ribonucleoprotein complex
GO:0030723 P ovarian fusome organization
GO:0034063 P stress granule assembly
GO:0034501 P protein localization to kinetochore
GO:0035011 P melanotic encapsulation of foreign target
GO:0040001 P establishment of mitotic spindle localization
GO:0040003 P chitin-based cuticle development
GO:0042623 F ATP hydrolysis activity
GO:0043005 C neuron projection
GO:0045169 C fusome
GO:0045172 C germline ring canal
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045478 P fusome organization
GO:0045505 F dynein intermediate chain binding
GO:0046604 P positive regulation of mitotic centrosome separation
GO:0047497 P mitochondrion transport along microtubule
GO:0048134 P germ-line cyst formation
GO:0048311 P mitochondrion distribution
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0050658 P RNA transport
GO:0051237 P maintenance of RNA location
GO:0051642 P centrosome localization
GO:0051683 P establishment of Golgi localization
GO:0051959 F dynein light intermediate chain binding
GO:1904115 C axon cytoplasm
GO:1904801 P positive regulation of neuron remodeling
6564 O_BomoEE15909_complete:A_BomoEE_comp68320_c0_seq2
4650bp
 PREDICTED:_dynein_heavy_chain,_cytoplasmic_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000776 C kinetochore
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005868 C cytoplasmic dynein complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005938 C cell cortex
GO:0006886 P intracellular protein transport
GO:0007018 P microtubule-based movement
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007098 P centrosome cycle
GO:0007279 P pole cell formation
GO:0007282 P cystoblast division
GO:0007294 P germarium-derived oocyte fate determination
GO:0007298 P border follicle cell migration
GO:0007301 P female germline ring canal formation
GO:0007312 P oocyte nucleus migration involved in oocyte dorsal/ventral axis specification
GO:0007349 P cellularization
GO:0007405 P neuroblast proliferation
GO:0008088 P axo-dendritic transport
GO:0008090 P retrograde axonal transport
GO:0008298 P intracellular mRNA localization
GO:0008569 F minus-end-directed microtubule motor activity
GO:0016319 P mushroom body development
GO:0016887 F ATP hydrolysis activity
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0030286 C dynein complex
GO:0030529 C ribonucleoprotein complex
GO:0030723 P ovarian fusome organization
GO:0034063 P stress granule assembly
GO:0034501 P protein localization to kinetochore
GO:0035011 P melanotic encapsulation of foreign target
GO:0040001 P establishment of mitotic spindle localization
GO:0040003 P chitin-based cuticle development
GO:0042623 F ATP hydrolysis activity
GO:0043005 C neuron projection
GO:0045169 C fusome
GO:0045172 C germline ring canal
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045478 P fusome organization
GO:0045505 F dynein intermediate chain binding
GO:0046604 P positive regulation of mitotic centrosome separation
GO:0047497 P mitochondrion transport along microtubule
GO:0048134 P germ-line cyst formation
GO:0048311 P mitochondrion distribution
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0050658 P RNA transport
GO:0051237 P maintenance of RNA location
GO:0051642 P centrosome localization
GO:0051683 P establishment of Golgi localization
GO:0051959 F dynein light intermediate chain binding
GO:1904115 C axon cytoplasm
GO:1904801 P positive regulation of neuron remodeling
6565 O_BomoEE1590_complete:A_BomoEE_comp32214_c0_seq1
611bp
 PREDICTED:_glucose_1,6-bisphosphate_synthase_[Papilio_machaon]
GO:0000287 F magnesium ion binding
GO:0004614 F phosphoglucomutase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0005978 P glycogen biosynthetic process
GO:0005980 P glycogen catabolic process
GO:0006006 P glucose metabolic process
GO:0006098 P pentose-phosphate shunt
GO:0008973 F phosphopentomutase activity
GO:0016853 F isomerase activity
GO:0016868 F intramolecular transferase activity, phosphotransferases
GO:0019388 P galactose catabolic process
GO:0046386 P deoxyribose phosphate catabolic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:0071704 P organic substance metabolic process
6566 O_BomoEE15910_complete:A_BomoEE_comp68320_c0_seq2
132bp
6567 O_BomoEE15911_complete:A_BomoEE_comp68320_c0_seq2
125bp
6568 O_BomoEE15912_complete:A_BomoEE_comp68320_c0_seq2
121bp
 hypothetical_protein_THAOC_10742,_partial_[Thalassiosira_oceanica]
6569 O_BomoEE15913_complete:A_BomoEE_comp68320_c0_seq2
113bp
6570 O_BomoEE15914_complete:A_BomoEE_comp68320_c0_seq2
112bp
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