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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6331 O_BomoEE1569_internal:A_BomoEE_comp32193_c1_seq1
269bp
 PREDICTED:_DNA_topoisomerase_2-binding_protein_1_[Bombyx_mori]
6332 O_BomoEE156_3prime_partial:A_BomoEE_comp2607_c0_seq1
169bp
 PREDICTED:_uncharacterized_protein_LOC105841746_isoform_X3_[Bombyx_mori]
6333 O_BomoEE15700_complete:A_BomoEE_comp68220_c0_seq8
121bp
6334 O_BomoEE15701_complete:A_BomoEE_comp68223_c0_seq1
388bp
 PREDICTED:_prostaglandin_E_synthase_2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001516 P prostaglandin biosynthetic process
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0006693 P prostaglandin metabolic process
GO:0009055 F electron transfer activity
GO:0015035 F protein-disulfide reductase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016829 F lyase activity
GO:0016853 F isomerase activity
GO:0020037 F heme binding
GO:0043295 F glutathione binding
GO:0045454 P cell redox homeostasis
GO:0048471 C perinuclear region of cytoplasm
GO:0050220 F prostaglandin-E synthase activity
GO:0055114 P obsolete oxidation-reduction process
6335 O_BomoEE15702_3prime_partial:A_BomoEE_comp68224_c1_seq1
157bp
 PREDICTED:_prolow-density_lipoprotein_receptor-related_protein_1-like_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0005905 C clathrin-coated pit
GO:0006766 P vitamin metabolic process
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007568 P aging
GO:0010165 P response to X-ray
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016197 P endosomal transport
GO:0016324 C apical plasma membrane
GO:0017124 F SH3 domain binding
GO:0020028 P endocytic hemoglobin import into cell
GO:0030165 F PDZ domain binding
GO:0030492 F hemoglobin binding
GO:0031100 P animal organ regeneration
GO:0031526 C brush border membrane
GO:0032403 F protein-containing complex binding
GO:0032526 P response to retinoic acid
GO:0033280 P response to vitamin D
GO:0042493 P response to xenobiotic stimulus
GO:0042562 F hormone binding
GO:0042953 P lipoprotein transport
GO:0042954 F obsolete lipoprotein transporter activity
GO:0043234 C protein-containing complex
GO:0045056 P transcytosis
GO:0045121 C membrane raft
GO:0046872 F metal ion binding
GO:0046879 P hormone secretion
GO:0050750 F low-density lipoprotein particle receptor binding
6336 O_BomoEE15703_5prime_partial:A_BomoEE_comp68224_c1_seq1
121bp
6337 O_BomoEE15704_3prime_partial:A_BomoEE_comp68224_c1_seq2
157bp
 PREDICTED:_prolow-density_lipoprotein_receptor-related_protein_1-like_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0005905 C clathrin-coated pit
GO:0006766 P vitamin metabolic process
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007568 P aging
GO:0010165 P response to X-ray
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016197 P endosomal transport
GO:0016324 C apical plasma membrane
GO:0017124 F SH3 domain binding
GO:0020028 P endocytic hemoglobin import into cell
GO:0030165 F PDZ domain binding
GO:0030492 F hemoglobin binding
GO:0031100 P animal organ regeneration
GO:0031526 C brush border membrane
GO:0032403 F protein-containing complex binding
GO:0032526 P response to retinoic acid
GO:0033280 P response to vitamin D
GO:0042493 P response to xenobiotic stimulus
GO:0042562 F hormone binding
GO:0042953 P lipoprotein transport
GO:0042954 F obsolete lipoprotein transporter activity
GO:0043234 C protein-containing complex
GO:0045056 P transcytosis
GO:0045121 C membrane raft
GO:0046872 F metal ion binding
GO:0046879 P hormone secretion
GO:0050750 F low-density lipoprotein particle receptor binding
6338 O_BomoEE15705_5prime_partial:A_BomoEE_comp68224_c1_seq2
121bp
6339 O_BomoEE15706_internal:A_BomoEE_comp68224_c1_seq3
276bp
 PREDICTED:_prolow-density_lipoprotein_receptor-related_protein_1-like_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0005905 C clathrin-coated pit
GO:0006766 P vitamin metabolic process
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007568 P aging
GO:0010165 P response to X-ray
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016197 P endosomal transport
GO:0016324 C apical plasma membrane
GO:0017124 F SH3 domain binding
GO:0020028 P endocytic hemoglobin import into cell
GO:0030165 F PDZ domain binding
GO:0030492 F hemoglobin binding
GO:0031100 P animal organ regeneration
GO:0031526 C brush border membrane
GO:0032403 F protein-containing complex binding
GO:0032526 P response to retinoic acid
GO:0033280 P response to vitamin D
GO:0042493 P response to xenobiotic stimulus
GO:0042562 F hormone binding
GO:0042953 P lipoprotein transport
GO:0042954 F obsolete lipoprotein transporter activity
GO:0043234 C protein-containing complex
GO:0045056 P transcytosis
GO:0045121 C membrane raft
GO:0046872 F metal ion binding
GO:0046879 P hormone secretion
GO:0050750 F low-density lipoprotein particle receptor binding
6340 O_BomoEE15707_5prime_partial:A_BomoEE_comp68224_c1_seq3
121bp
6341 O_BomoEE15708_complete:A_BomoEE_comp68225_c0_seq1
643bp
 PREDICTED:_serine/threonine-protein_kinase/endoribonuclease_IRE1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0001666 P response to hypoxia
GO:0002119 P nematode larval development
GO:0003824 F catalytic activity
GO:0004521 F endoribonuclease activity
GO:0004540 F ribonuclease activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006397 P mRNA processing
GO:0006468 P protein phosphorylation
GO:0006986 P response to unfolded protein
GO:0006990 P positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0030969 P obsolete mRNA splicing via endonucleolytic cleavage and ligation involved in unfolded protein response
GO:0035966 P response to topologically incorrect protein
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:1902255 P positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator
GO:1904576 P response to tunicamycin
6342 O_BomoEE15709_complete:A_BomoEE_comp68225_c0_seq1
162bp
6343 O_BomoEE1570_complete:A_BomoEE_comp32193_c1_seq1
207bp
6344 O_BomoEE15710_complete:A_BomoEE_comp68225_c0_seq3
750bp
 PREDICTED:_serine/threonine-protein_kinase/endoribonuclease_IRE1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0001666 P response to hypoxia
GO:0002119 P nematode larval development
GO:0003824 F catalytic activity
GO:0004521 F endoribonuclease activity
GO:0004540 F ribonuclease activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006397 P mRNA processing
GO:0006468 P protein phosphorylation
GO:0006986 P response to unfolded protein
GO:0006990 P positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0030969 P obsolete mRNA splicing via endonucleolytic cleavage and ligation involved in unfolded protein response
GO:0035966 P response to topologically incorrect protein
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:1902255 P positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator
GO:1904576 P response to tunicamycin
6345 O_BomoEE15711_complete:A_BomoEE_comp68225_c0_seq3
162bp
6346 O_BomoEE15712_3prime_partial:A_BomoEE_comp68225_c0_seq4
831bp
 PREDICTED:_serine/threonine-protein_kinase/endoribonuclease_IRE1_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0001666 P response to hypoxia
GO:0002119 P nematode larval development
GO:0003824 F catalytic activity
GO:0004521 F endoribonuclease activity
GO:0004540 F ribonuclease activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006397 P mRNA processing
GO:0006468 P protein phosphorylation
GO:0006986 P response to unfolded protein
GO:0006990 P positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0030969 P obsolete mRNA splicing via endonucleolytic cleavage and ligation involved in unfolded protein response
GO:0035966 P response to topologically incorrect protein
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:1902255 P positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator
GO:1904576 P response to tunicamycin
6347 O_BomoEE15713_complete:A_BomoEE_comp68225_c0_seq4
162bp
6348 O_BomoEE15714_5prime_partial:A_BomoEE_comp68225_c0_seq4
110bp
6349 O_BomoEE15715_3prime_partial:A_BomoEE_comp68225_c0_seq5
178bp
 PREDICTED:_serine/threonine-protein_kinase/endoribonuclease_IRE1_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0001935 P endothelial cell proliferation
GO:0003824 F catalytic activity
GO:0004519 F endonuclease activity
GO:0004521 F endoribonuclease activity
GO:0004540 F ribonuclease activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005637 C nuclear inner membrane
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006986 P response to unfolded protein
GO:0006987 P obsolete activation of signaling protein activity involved in unfolded protein response
GO:0007050 P regulation of cell cycle
GO:0007257 P obsolete activation of JUN kinase activity
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0019899 F enzyme binding
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0030544 F Hsp70 protein binding
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0033120 P positive regulation of RNA splicing
GO:0034976 P response to endoplasmic reticulum stress
GO:0035924 P cellular response to vascular endothelial growth factor stimulus
GO:0036289 P peptidyl-serine autophosphorylation
GO:0036498 P IRE1-mediated unfolded protein response
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043531 F ADP binding
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
GO:0051879 F Hsp90 protein binding
GO:0070054 P mRNA splicing, via endonucleolytic cleavage and ligation
GO:0070055 P obsolete mRNA endonucleolytic cleavage involved in unfolded protein response
GO:0070059 P intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress
GO:0071333 P cellular response to glucose stimulus
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:1900103 P positive regulation of endoplasmic reticulum unfolded protein response
GO:1901142 P insulin metabolic process
GO:1990579 P peptidyl-serine trans-autophosphorylation
GO:1990597 C AIP1-IRE1 complex
GO:1990604 C IRE1-TRAF2-ASK1 complex
GO:1990630 C IRE1-RACK1-PP2A complex
6350 O_BomoEE15716_5prime_partial:A_BomoEE_comp68225_c0_seq5
110bp
6351 O_BomoEE15717_complete:A_BomoEE_comp68226_c0_seq1
704bp
 PREDICTED:_P-element_somatic_inhibitor_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0010628 P positive regulation of gene expression
GO:0044822 F RNA binding
6352 O_BomoEE15718_complete:A_BomoEE_comp68227_c0_seq1
343bp
 PREDICTED:_nucleoporin-like_protein_2_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031965 C nuclear membrane
GO:0046872 F metal ion binding
GO:0051028 P mRNA transport
6353 O_BomoEE15719_complete:A_BomoEE_comp68227_c0_seq1
105bp
 PREDICTED:_U5_small_nuclear_ribonucleoprotein_40_kDa_protein_isoform_X3_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
6354 O_BomoEE1571_complete:A_BomoEE_comp32196_c0_seq1
470bp
 putative_zinc_finger_protein_45-like_protein_[Operophtera_brumata]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
6355 O_BomoEE15720_complete:A_BomoEE_comp68227_c0_seq2
350bp
 PREDICTED:_U5_small_nuclear_ribonucleoprotein_40_kDa_protein_isoform_X2_[Amyelois_transitella]
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0005732 C sno(s)RNA-containing ribonucleoprotein complex
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
6356 O_BomoEE15721_complete:A_BomoEE_comp68227_c0_seq2
343bp
 PREDICTED:_nucleoporin-like_protein_2_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031965 C nuclear membrane
GO:0046872 F metal ion binding
GO:0051028 P mRNA transport
6357 O_BomoEE15722_complete:A_BomoEE_comp68227_c0_seq4
343bp
 PREDICTED:_nucleoporin-like_protein_2_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031965 C nuclear membrane
GO:0046872 F metal ion binding
GO:0051028 P mRNA transport
6358 O_BomoEE15723_complete:A_BomoEE_comp68227_c0_seq5
308bp
 PREDICTED:_U5_small_nuclear_ribonucleoprotein_40_kDa_protein_isoform_X2_[Amyelois_transitella]
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0005732 C sno(s)RNA-containing ribonucleoprotein complex
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
6359 O_BomoEE15724_complete:A_BomoEE_comp68228_c0_seq1
704bp
 PREDICTED:_histone-lysine_N-methyltransferase_SUV420H1_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005720 C heterochromatin
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0034770 P histone H4-K20 methylation
GO:0034772 P histone H4-K20 dimethylation
GO:0034773 P histone H4-K20 trimethylation
GO:0040029 P regulation of gene expression, epigenetic
GO:0042799 F histone methyltransferase activity (H4-K20 specific)
6360 O_BomoEE15725_complete:A_BomoEE_comp68228_c0_seq1
114bp
 ring_box_protein_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0007224 P smoothened signaling pathway
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0016322 P neuron remodeling
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0019788 F NEDD8 transferase activity
GO:0019915 P lipid storage
GO:0022008 P neurogenesis
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031463 C Cul3-RING ubiquitin ligase complex
GO:0031467 C Cul7-RING ubiquitin ligase complex
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043224 C nuclear SCF ubiquitin ligase complex
GO:0045116 P protein neddylation
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
GO:0097602 F cullin family protein binding
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