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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6121 O_BomoEE1550_internal:A_BomoEE_comp32137_c0_seq1
311bp
 PREDICTED:_non-lysosomal_glucosylceramidase-like_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004348 F glucosylceramidase activity
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0008152 P metabolic process
GO:0008206 P bile acid metabolic process
GO:0008422 F beta-glucosidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016139 P glycoside catabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
6122 O_BomoEE15510_5prime_partial:A_BomoEE_comp68142_c0_seq2
103bp
 PREDICTED:_transmembrane_and_coiled-coil_domains_protein_2_isoform_X4_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
6123 O_BomoEE15511_complete:A_BomoEE_comp68145_c0_seq1
366bp
 PREDICTED:_LIM/homeobox_protein_Lhx3_isoform_X5_[Bombyx_mori]
GO:0001076 F obsolete transcription factor activity, RNA polymerase II transcription factor binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005623 C obsolete cell
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008045 P motor neuron axon guidance
GO:0008270 F zinc ion binding
GO:0009953 P dorsal/ventral pattern formation
GO:0021520 P spinal cord motor neuron cell fate specification
GO:0021521 P ventral spinal cord interneuron specification
GO:0021526 P medial motor column neuron differentiation
GO:0021527 P spinal cord association neuron differentiation
GO:0021983 P pituitary gland development
GO:0030154 P cell differentiation
GO:0043066 P negative regulation of apoptotic process
GO:0043565 F sequence-specific DNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048839 P inner ear development
6124 O_BomoEE15512_complete:A_BomoEE_comp68145_c0_seq1
112bp
6125 O_BomoEE15513_complete:A_BomoEE_comp68145_c0_seq2
371bp
 PREDICTED:_LIM/homeobox_protein_Lhx3_isoform_X5_[Bombyx_mori]
GO:0001076 F obsolete transcription factor activity, RNA polymerase II transcription factor binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005623 C obsolete cell
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008045 P motor neuron axon guidance
GO:0008270 F zinc ion binding
GO:0009953 P dorsal/ventral pattern formation
GO:0021520 P spinal cord motor neuron cell fate specification
GO:0021521 P ventral spinal cord interneuron specification
GO:0021526 P medial motor column neuron differentiation
GO:0021527 P spinal cord association neuron differentiation
GO:0021983 P pituitary gland development
GO:0030154 P cell differentiation
GO:0043066 P negative regulation of apoptotic process
GO:0043565 F sequence-specific DNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048839 P inner ear development
6126 O_BomoEE15514_complete:A_BomoEE_comp68145_c0_seq2
112bp
6127 O_BomoEE15515_complete:A_BomoEE_comp68146_c0_seq1
657bp
 PREDICTED:_uncharacterized_protein_LOC101745243_[Bombyx_mori]
6128 O_BomoEE15516_complete:A_BomoEE_comp68146_c0_seq1
262bp
6129 O_BomoEE15517_complete:A_BomoEE_comp68146_c0_seq2
422bp
 PREDICTED:_uncharacterized_protein_LOC101745243_[Bombyx_mori]
6130 O_BomoEE15518_complete:A_BomoEE_comp68146_c0_seq2
266bp
6131 O_BomoEE15519_complete:A_BomoEE_comp68146_c0_seq3
333bp
 PREDICTED:_uncharacterized_protein_LOC101745243_[Bombyx_mori]
6132 O_BomoEE1551_complete:A_BomoEE_comp32137_c0_seq1
107bp
6133 O_BomoEE15520_complete:A_BomoEE_comp68146_c0_seq3
262bp
 PREDICTED:_uncharacterized_protein_LOC101745243_[Bombyx_mori]
6134 O_BomoEE15521_complete:A_BomoEE_comp68146_c0_seq3
262bp
6135 O_BomoEE15522_complete:A_BomoEE_comp68146_c0_seq3
107bp
6136 O_BomoEE15523_internal:A_BomoEE_comp68148_c0_seq1
176bp
 PREDICTED:_nose_resistant_to_fluoxetine_protein_6-like_[Bombyx_mori]
6137 O_BomoEE15524_complete:A_BomoEE_comp68148_c0_seq2
162bp
 PREDICTED:_nose_resistant_to_fluoxetine_protein_6-like_[Bombyx_mori]
6138 O_BomoEE15525_internal:A_BomoEE_comp68148_c0_seq3
181bp
 PREDICTED:_nose_resistant_to_fluoxetine_protein_6-like_isoform_X2_[Bombyx_mori]
6139 O_BomoEE15526_complete:A_BomoEE_comp68149_c0_seq1
247bp
 PREDICTED:_nose_resistant_to_fluoxetine_protein_6-like_[Bombyx_mori]
6140 O_BomoEE15527_complete:A_BomoEE_comp68149_c0_seq3
493bp
 PREDICTED:_nose_resistant_to_fluoxetine_protein_6-like_[Bombyx_mori]
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
6141 O_BomoEE15528_complete:A_BomoEE_comp68151_c0_seq1
532bp
 PREDICTED:_insulin-like_growth_factor_2_mRNA-binding_protein_1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006810 P transport
GO:0010494 C cytoplasmic stress granule
GO:0010610 P regulation of mRNA stability involved in response to stress
GO:0010976 P positive regulation of neuron projection development
GO:0017148 P negative regulation of translation
GO:0022013 P pallium cell proliferation in forebrain
GO:0030027 C lamellipodium
GO:0030175 C filopodium
GO:0030426 C growth cone
GO:0030529 C ribonucleoprotein complex
GO:0042995 C cell projection
GO:0044822 F RNA binding
GO:0045182 F translation regulator activity
GO:0048027 F mRNA 5'-UTR binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051028 P mRNA transport
GO:0070934 P CRD-mediated mRNA stabilization
GO:0070937 C CRD-mediated mRNA stability complex
GO:0097150 P neuronal stem cell population maintenance
6142 O_BomoEE15529_complete:A_BomoEE_comp68151_c0_seq1
172bp
6143 O_BomoEE1552_complete:A_BomoEE_comp32142_c0_seq1
194bp
 Bm8_interacting_protein_2d-2_[Bombyx_mori]
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007416 P synapse assembly
GO:0007611 P learning or memory
GO:0007613 P memory
GO:0007616 P long-term memory
GO:0008345 P larval locomotory behavior
GO:0008355 P olfactory learning
GO:0040011 P locomotion
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048813 P dendrite morphogenesis
GO:0050773 P regulation of dendrite development
6144 O_BomoEE15530_complete:A_BomoEE_comp68151_c0_seq1
159bp
6145 O_BomoEE15531_complete:A_BomoEE_comp68151_c0_seq1
107bp
6146 O_BomoEE15532_complete:A_BomoEE_comp68151_c0_seq1
102bp
6147 O_BomoEE15533_complete:A_BomoEE_comp68151_c0_seq2
521bp
 PREDICTED:_insulin-like_growth_factor_2_mRNA-binding_protein_1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006810 P transport
GO:0010494 C cytoplasmic stress granule
GO:0010610 P regulation of mRNA stability involved in response to stress
GO:0010976 P positive regulation of neuron projection development
GO:0017148 P negative regulation of translation
GO:0022013 P pallium cell proliferation in forebrain
GO:0030027 C lamellipodium
GO:0030175 C filopodium
GO:0030426 C growth cone
GO:0030529 C ribonucleoprotein complex
GO:0042995 C cell projection
GO:0044822 F RNA binding
GO:0045182 F translation regulator activity
GO:0048027 F mRNA 5'-UTR binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051028 P mRNA transport
GO:0070934 P CRD-mediated mRNA stabilization
GO:0070937 C CRD-mediated mRNA stability complex
GO:0097150 P neuronal stem cell population maintenance
6148 O_BomoEE15534_complete:A_BomoEE_comp68151_c0_seq2
172bp
6149 O_BomoEE15535_complete:A_BomoEE_comp68151_c0_seq2
161bp
6150 O_BomoEE15536_complete:A_BomoEE_comp68151_c0_seq2
107bp
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