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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5491 O_BomoEE14943_complete:A_BomoEE_comp67974_c0_seq1
427bp
 PREDICTED:_fasciclin-3_isoform_X5_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0005102 F signaling receptor binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005913 C adherens junction
GO:0005918 C septate junction
GO:0005920 C smooth septate junction
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007413 P axonal fasciculation
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007611 P learning or memory
GO:0008039 P synaptic target recognition
GO:0008355 P olfactory learning
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016200 P synaptic target attraction
GO:0016323 C basolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0030154 P cell differentiation
GO:0030707 P ovarian follicle cell development
GO:0031594 C neuromuscular junction
GO:0031965 C nuclear membrane
GO:0042803 F protein homodimerization activity
GO:0050839 F cell adhesion molecule binding
GO:0055037 C recycling endosome
5492 O_BomoEE14944_complete:A_BomoEE_comp67974_c0_seq1
139bp
5493 O_BomoEE14945_complete:A_BomoEE_comp67975_c0_seq1
449bp
 PREDICTED:_atf2_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001102 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001158 F cis-regulatory region sequence-specific DNA binding
GO:0003151 P outflow tract morphogenesis
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006970 P response to osmotic stress
GO:0006974 P cellular response to DNA damage stimulus
GO:0008134 F transcription factor binding
GO:0008140 F cAMP response element binding protein binding
GO:0009414 P response to water deprivation
GO:0016020 C membrane
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0019901 F protein kinase binding
GO:0031573 P mitotic intra-S DNA damage checkpoint signaling
GO:0032915 P positive regulation of transforming growth factor beta2 production
GO:0035497 F cAMP response element binding
GO:0035861 C site of double-strand break
GO:0043525 P positive regulation of neuron apoptotic process
GO:0043565 F sequence-specific DNA binding
GO:0045444 P fat cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0046982 F protein heterodimerization activity
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0060612 P adipose tissue development
GO:0097186 P amelogenesis
GO:1902110 P positive regulation of mitochondrial membrane permeability involved in apoptotic process
5494 O_BomoEE14946_complete:A_BomoEE_comp67975_c0_seq1
117bp
5495 O_BomoEE14947_complete:A_BomoEE_comp67975_c0_seq1
106bp
5496 O_BomoEE14948_complete:A_BomoEE_comp67975_c0_seq2
433bp
 PREDICTED:_atf2_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001102 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001158 F cis-regulatory region sequence-specific DNA binding
GO:0003151 P outflow tract morphogenesis
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006970 P response to osmotic stress
GO:0006974 P cellular response to DNA damage stimulus
GO:0008134 F transcription factor binding
GO:0008140 F cAMP response element binding protein binding
GO:0009414 P response to water deprivation
GO:0016020 C membrane
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0019901 F protein kinase binding
GO:0031573 P mitotic intra-S DNA damage checkpoint signaling
GO:0032915 P positive regulation of transforming growth factor beta2 production
GO:0035497 F cAMP response element binding
GO:0035861 C site of double-strand break
GO:0043525 P positive regulation of neuron apoptotic process
GO:0043565 F sequence-specific DNA binding
GO:0045444 P fat cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0046982 F protein heterodimerization activity
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0060612 P adipose tissue development
GO:0097186 P amelogenesis
GO:1902110 P positive regulation of mitochondrial membrane permeability involved in apoptotic process
5497 O_BomoEE14949_complete:A_BomoEE_comp67975_c0_seq2
117bp
5498 O_BomoEE1494_internal:A_BomoEE_comp31796_c0_seq1
182bp
 PREDICTED:_uncharacterized_protein_LOC106137883_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0006351 P transcription, DNA-templated
GO:0006464 P cellular protein modification process
GO:0007283 P spermatogenesis
GO:0007288 P sperm axoneme assembly
GO:0009566 P fertilization
GO:0016874 F ligase activity
GO:0018095 P protein polyglutamylation
GO:0030317 P flagellated sperm motility
GO:0042995 C cell projection
5499 O_BomoEE14950_complete:A_BomoEE_comp67975_c0_seq4
433bp
 PREDICTED:_atf2_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001102 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001158 F cis-regulatory region sequence-specific DNA binding
GO:0003151 P outflow tract morphogenesis
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006970 P response to osmotic stress
GO:0006974 P cellular response to DNA damage stimulus
GO:0008134 F transcription factor binding
GO:0008140 F cAMP response element binding protein binding
GO:0009414 P response to water deprivation
GO:0016020 C membrane
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0019901 F protein kinase binding
GO:0031573 P mitotic intra-S DNA damage checkpoint signaling
GO:0032915 P positive regulation of transforming growth factor beta2 production
GO:0035497 F cAMP response element binding
GO:0035861 C site of double-strand break
GO:0043525 P positive regulation of neuron apoptotic process
GO:0043565 F sequence-specific DNA binding
GO:0045444 P fat cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0046982 F protein heterodimerization activity
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0060612 P adipose tissue development
GO:0097186 P amelogenesis
GO:1902110 P positive regulation of mitochondrial membrane permeability involved in apoptotic process
5500 O_BomoEE14951_complete:A_BomoEE_comp67975_c0_seq4
117bp
5501 O_BomoEE14952_complete:A_BomoEE_comp67975_c0_seq6
433bp
 PREDICTED:_atf2_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001102 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001158 F cis-regulatory region sequence-specific DNA binding
GO:0003151 P outflow tract morphogenesis
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006970 P response to osmotic stress
GO:0006974 P cellular response to DNA damage stimulus
GO:0008134 F transcription factor binding
GO:0008140 F cAMP response element binding protein binding
GO:0009414 P response to water deprivation
GO:0016020 C membrane
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0019901 F protein kinase binding
GO:0031573 P mitotic intra-S DNA damage checkpoint signaling
GO:0032915 P positive regulation of transforming growth factor beta2 production
GO:0035497 F cAMP response element binding
GO:0035861 C site of double-strand break
GO:0043525 P positive regulation of neuron apoptotic process
GO:0043565 F sequence-specific DNA binding
GO:0045444 P fat cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0046982 F protein heterodimerization activity
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0060612 P adipose tissue development
GO:0097186 P amelogenesis
GO:1902110 P positive regulation of mitochondrial membrane permeability involved in apoptotic process
5502 O_BomoEE14953_complete:A_BomoEE_comp67975_c0_seq6
117bp
5503 O_BomoEE14954_complete:A_BomoEE_comp67977_c0_seq1
108bp
 hypothetical_protein_KGM_15116_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0009306 P protein secretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0030173 C integral component of Golgi membrane
5504 O_BomoEE14955_complete:A_BomoEE_comp67977_c0_seq2
140bp
 hypothetical_protein_KGM_17625_[Danaus_plexippus]
GO:0000245 P spliceosomal complex assembly
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0000932 C P-body
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0002230 P positive regulation of defense response to virus by host
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005688 C U6 snRNP
GO:0005829 C cytosol
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0017070 F U6 snRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0033962 P P-body assembly
GO:0043005 C neuron projection
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0044822 F RNA binding
GO:0097526 C spliceosomal tri-snRNP complex
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
5505 O_BomoEE14956_complete:A_BomoEE_comp67977_c0_seq2
108bp
 hypothetical_protein_KGM_15116_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0009306 P protein secretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0030173 C integral component of Golgi membrane
5506 O_BomoEE14957_complete:A_BomoEE_comp67977_c0_seq3
108bp
 hypothetical_protein_KGM_15116_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0009306 P protein secretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0030173 C integral component of Golgi membrane
5507 O_BomoEE14958_complete:A_BomoEE_comp67977_c0_seq4
146bp
 hypothetical_protein_KGM_15116_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0009306 P protein secretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0030173 C integral component of Golgi membrane
5508 O_BomoEE14959_complete:A_BomoEE_comp67977_c0_seq4
109bp
 PREDICTED:_uncharacterized_Golgi_apparatus_membrane_protein-like_protein_CG5021_isoform_X2_[Amyelois_transitella]
5509 O_BomoEE1495_5prime_partial:A_BomoEE_comp31796_c0_seq1
105bp
5510 O_BomoEE14960_complete:A_BomoEE_comp67977_c0_seq5
179bp
 hypothetical_protein_KGM_15116_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0009306 P protein secretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0030173 C integral component of Golgi membrane
5511 O_BomoEE14961_complete:A_BomoEE_comp67977_c0_seq5
140bp
 hypothetical_protein_KGM_17625_[Danaus_plexippus]
GO:0000245 P spliceosomal complex assembly
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0000932 C P-body
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0002230 P positive regulation of defense response to virus by host
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005688 C U6 snRNP
GO:0005829 C cytosol
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0017070 F U6 snRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0033962 P P-body assembly
GO:0043005 C neuron projection
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0044822 F RNA binding
GO:0097526 C spliceosomal tri-snRNP complex
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
5512 O_BomoEE14962_complete:A_BomoEE_comp67977_c0_seq6
212bp
 hypothetical_protein_KGM_15116_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0009306 P protein secretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0030173 C integral component of Golgi membrane
5513 O_BomoEE14963_complete:A_BomoEE_comp67977_c0_seq6
140bp
 hypothetical_protein_KGM_17625_[Danaus_plexippus]
GO:0000245 P spliceosomal complex assembly
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0000932 C P-body
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0002230 P positive regulation of defense response to virus by host
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005688 C U6 snRNP
GO:0005829 C cytosol
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0017070 F U6 snRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0033962 P P-body assembly
GO:0043005 C neuron projection
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0044822 F RNA binding
GO:0097526 C spliceosomal tri-snRNP complex
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
5514 O_BomoEE14964_complete:A_BomoEE_comp67977_c0_seq7
174bp
 PREDICTED:_uncharacterized_Golgi_apparatus_membrane_protein-like_protein_CG5021_isoform_X2_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0009306 P protein secretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0030173 C integral component of Golgi membrane
5515 O_BomoEE14965_complete:A_BomoEE_comp67977_c0_seq8
217bp
 hypothetical_protein_KGM_15116_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0009306 P protein secretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0030173 C integral component of Golgi membrane
5516 O_BomoEE14966_complete:A_BomoEE_comp67977_c0_seq9
212bp
 hypothetical_protein_KGM_15116_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0009306 P protein secretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0030173 C integral component of Golgi membrane
5517 O_BomoEE14967_complete:A_BomoEE_comp67977_c0_seq10
146bp
 hypothetical_protein_KGM_15116_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0009306 P protein secretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0030173 C integral component of Golgi membrane
5518 O_BomoEE14968_complete:A_BomoEE_comp67977_c0_seq10
140bp
 hypothetical_protein_KGM_17625_[Danaus_plexippus]
GO:0000245 P spliceosomal complex assembly
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0000932 C P-body
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0002230 P positive regulation of defense response to virus by host
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005688 C U6 snRNP
GO:0005829 C cytosol
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0017070 F U6 snRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0033962 P P-body assembly
GO:0043005 C neuron projection
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0044822 F RNA binding
GO:0097526 C spliceosomal tri-snRNP complex
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
5519 O_BomoEE14969_complete:A_BomoEE_comp67977_c0_seq10
109bp
 PREDICTED:_uncharacterized_Golgi_apparatus_membrane_protein-like_protein_CG5021_isoform_X2_[Amyelois_transitella]
5520 O_BomoEE1496_5prime_partial:A_BomoEE_comp31880_c0_seq1
100bp
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