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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
511 O_BomoEE10460_complete:A_BomoEE_comp64250_c0_seq1
395bp
 ARP6_actin-related_protein_6-like_protein_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006338 P chromatin remodeling
512 O_BomoEE10461_complete:A_BomoEE_comp64253_c0_seq1
504bp
 PREDICTED:_organic_cation_transporter_protein_isoform_X2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006915 P apoptotic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
513 O_BomoEE10462_complete:A_BomoEE_comp64253_c0_seq3
552bp
 PREDICTED:_organic_cation_transporter_protein_isoform_X2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006915 P apoptotic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
514 O_BomoEE10463_complete:A_BomoEE_comp64254_c0_seq1
245bp
515 O_BomoEE10464_complete:A_BomoEE_comp64254_c0_seq1
130bp
 PREDICTED:_zinc_finger_Y-chromosomal_protein_1-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
516 O_BomoEE10465_complete:A_BomoEE_comp64254_c0_seq1
115bp
517 O_BomoEE10466_3prime_partial:A_BomoEE_comp64257_c0_seq1
276bp
 PREDICTED:_serine/arginine_repetitive_matrix_protein_1_isoform_X3_[Bombyx_mori]
518 O_BomoEE10467_5prime_partial:A_BomoEE_comp64257_c0_seq1
119bp
 PREDICTED:_serine/arginine_repetitive_matrix_protein_2_isoform_X2_[Bombyx_mori]
519 O_BomoEE10468_3prime_partial:A_BomoEE_comp64257_c0_seq2
258bp
 PREDICTED:_serine/arginine_repetitive_matrix_protein_2_isoform_X2_[Bombyx_mori]
520 O_BomoEE10469_5prime_partial:A_BomoEE_comp64257_c1_seq1
151bp
 PREDICTED:_serine/arginine_repetitive_matrix_protein_1_isoform_X3_[Bombyx_mori]
521 O_BomoEE1046_5prime_partial:A_BomoEE_comp23422_c0_seq1
146bp
D-serine/D-alanine/glycine_transporter_[Propionibacterium_acnes_JCM_18916]
GO:0001761 F beta-alanine transmembrane transporter activity
GO:0001762 P beta-alanine transport
GO:0003333 P amino acid transmembrane transport
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015180 F L-alanine transmembrane transporter activity
GO:0015187 F glycine transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015808 P L-alanine transport
GO:0015816 P glycine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042891 P obsolete antibiotic transport
GO:0042895 F obsolete antibiotic transmembrane transporter activity
GO:0042941 P D-alanine transport
GO:0042942 P D-serine transport
GO:0042944 F D-alanine transmembrane transporter activity
GO:0042945 F D-serine transmembrane transporter activity
GO:0055085 P transmembrane transport
522 O_BomoEE10470_3prime_partial:A_BomoEE_comp64262_c0_seq1
404bp
 PREDICTED:_protein_phosphatase_PP2A_55_kDa_regulatory_subunit_isoform_X2_[Amyelois_transitella]
GO:0000159 C protein phosphatase type 2A complex
GO:0000278 P mitotic cell cycle
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006470 P protein dephosphorylation
GO:0007091 P metaphase/anaphase transition of mitotic cell cycle
GO:0007099 P centriole replication
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007423 P sensory organ development
GO:0007447 P imaginal disc pattern formation
GO:0008601 F protein phosphatase regulator activity
GO:0016055 P Wnt signaling pathway
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0034047 P regulation of phosphoprotein phosphatase activity
GO:0045201 P maintenance of neuroblast polarity
GO:0050821 P protein stabilization
GO:0051297 P centrosome cycle
523 O_BomoEE10471_3prime_partial:A_BomoEE_comp64262_c0_seq2
398bp
 PREDICTED:_protein_phosphatase_PP2A_55_kDa_regulatory_subunit_isoform_X3_[Amyelois_transitella]
GO:0000159 C protein phosphatase type 2A complex
GO:0000278 P mitotic cell cycle
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006470 P protein dephosphorylation
GO:0007091 P metaphase/anaphase transition of mitotic cell cycle
GO:0007099 P centriole replication
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007423 P sensory organ development
GO:0007447 P imaginal disc pattern formation
GO:0008601 F protein phosphatase regulator activity
GO:0016055 P Wnt signaling pathway
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0034047 P regulation of phosphoprotein phosphatase activity
GO:0045201 P maintenance of neuroblast polarity
GO:0050821 P protein stabilization
GO:0051297 P centrosome cycle
524 O_BomoEE10472_complete:A_BomoEE_comp64266_c0_seq1
1495bp
 PREDICTED:_pleckstrin_homology-like_domain_family_B_member_1_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0010470 P regulation of gastrulation
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0016020 C membrane
GO:0031252 C cell leading edge
GO:0045111 C intermediate filament cytoskeleton
GO:0045180 C basal cortex
GO:0045184 P establishment of protein localization
GO:0051497 P negative regulation of stress fiber assembly
GO:0051895 P negative regulation of focal adhesion assembly
GO:0070507 P regulation of microtubule cytoskeleton organization
GO:1903690 P negative regulation of wound healing, spreading of epidermal cells
GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
525 O_BomoEE10473_complete:A_BomoEE_comp64266_c0_seq1
233bp
526 O_BomoEE10474_complete:A_BomoEE_comp64266_c0_seq1
124bp
527 O_BomoEE10475_complete:A_BomoEE_comp64266_c0_seq1
113bp
528 O_BomoEE10476_complete:A_BomoEE_comp64266_c0_seq1
112bp
529 O_BomoEE10477_internal:A_BomoEE_comp64269_c0_seq1
235bp
 PREDICTED:_paired_box_protein_Pax-5_isoform_X6_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007367 P segment polarity determination
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048793 P pronephros development
530 O_BomoEE10478_internal:A_BomoEE_comp64269_c0_seq1
235bp
 hypothetical_protein_X975_04433,_partial_[Stegodyphus_mimosarum]
531 O_BomoEE10479_internal:A_BomoEE_comp64269_c0_seq2
163bp
532 O_BomoEE1047_complete:A_BomoEE_comp23422_c0_seq1
128bp
533 O_BomoEE10480_5prime_partial:A_BomoEE_comp64269_c0_seq2
110bp
534 O_BomoEE10481_internal:A_BomoEE_comp64269_c0_seq3
155bp
535 O_BomoEE10482_internal:A_BomoEE_comp64269_c0_seq4
243bp
 hypothetical_protein_X975_04433,_partial_[Stegodyphus_mimosarum]
536 O_BomoEE10483_5prime_partial:A_BomoEE_comp64269_c0_seq4
199bp
 PREDICTED:_paired_box_protein_Pax-5_isoform_X6_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007367 P segment polarity determination
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048793 P pronephros development
537 O_BomoEE10484_3prime_partial:A_BomoEE_comp64269_c0_seq5
111bp
538 O_BomoEE10485_5prime_partial:A_BomoEE_comp64269_c0_seq5
110bp
539 O_BomoEE10486_5prime_partial:A_BomoEE_comp64269_c0_seq6
201bp
 PREDICTED:_paired_box_protein_Pax-5_isoform_X6_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007367 P segment polarity determination
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048793 P pronephros development
540 O_BomoEE10487_3prime_partial:A_BomoEE_comp64269_c0_seq6
191bp
 hypothetical_protein_X975_04433,_partial_[Stegodyphus_mimosarum]
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