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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4891 O_BomoEE14402_complete:A_BomoEE_comp67774_c0_seq1
131bp
4892 O_BomoEE14403_complete:A_BomoEE_comp67774_c0_seq2
272bp
 PREDICTED:_liprin-beta-1_isoform_X10_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005925 C focal adhesion
GO:0008150 P biological_process
4893 O_BomoEE14404_complete:A_BomoEE_comp67774_c0_seq2
186bp
4894 O_BomoEE14405_3prime_partial:A_BomoEE_comp67774_c0_seq3
375bp
 PREDICTED:_liprin-beta-1_isoform_X12_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005925 C focal adhesion
GO:0008150 P biological_process
4895 O_BomoEE14406_complete:A_BomoEE_comp67774_c0_seq3
131bp
4896 O_BomoEE14407_3prime_partial:A_BomoEE_comp67774_c0_seq4
405bp
 PREDICTED:_liprin-beta-1_isoform_X7_[Bombyx_mori]
GO:0005615 C extracellular space
4897 O_BomoEE14408_complete:A_BomoEE_comp67774_c0_seq4
131bp
4898 O_BomoEE14409_complete:A_BomoEE_comp67774_c0_seq5
239bp
 PREDICTED:_liprin-beta-1_isoform_X10_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005925 C focal adhesion
GO:0008150 P biological_process
4899 O_BomoEE1440_complete:A_BomoEE_comp30826_c0_seq1
104bp
4900 O_BomoEE14410_complete:A_BomoEE_comp67774_c0_seq5
153bp
4901 O_BomoEE14411_complete:A_BomoEE_comp67774_c0_seq6
269bp
 PREDICTED:_liprin-beta-1_isoform_X7_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005615 C extracellular space
GO:0005622 C intracellular anatomical structure
4902 O_BomoEE14412_complete:A_BomoEE_comp67774_c0_seq6
153bp
4903 O_BomoEE14413_3prime_partial:A_BomoEE_comp67774_c0_seq7
342bp
 PREDICTED:_liprin-beta-1_isoform_X12_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005925 C focal adhesion
GO:0008150 P biological_process
4904 O_BomoEE14414_complete:A_BomoEE_comp67774_c0_seq7
131bp
4905 O_BomoEE14415_complete:A_BomoEE_comp67774_c0_seq8
302bp
 PREDICTED:_liprin-beta-1_isoform_X7_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005615 C extracellular space
GO:0005622 C intracellular anatomical structure
4906 O_BomoEE14416_complete:A_BomoEE_comp67774_c0_seq8
186bp
4907 O_BomoEE14417_complete:A_BomoEE_comp67777_c0_seq1
341bp
 PREDICTED:_ribonuclease_P_protein_subunit_p40-like_[Amyelois_transitella]
GO:0001682 P tRNA 5'-leader removal
GO:0004526 F ribonuclease P activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005655 C nucleolar ribonuclease P complex
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008033 P tRNA processing
GO:0016787 F hydrolase activity
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
4908 O_BomoEE14418_complete:A_BomoEE_comp67777_c0_seq1
155bp
 superoxide_dismutase_[Cu-Zn]_[Bombyx_mori]
GO:0004784 F superoxide dismutase activity
GO:0005737 C cytoplasm
GO:0006801 P superoxide metabolic process
GO:0016209 F antioxidant activity
GO:0016491 F oxidoreductase activity
GO:0019430 P removal of superoxide radicals
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
4909 O_BomoEE14419_complete:A_BomoEE_comp67777_c0_seq2
341bp
 PREDICTED:_ribonuclease_P_protein_subunit_p40-like_[Amyelois_transitella]
GO:0001682 P tRNA 5'-leader removal
GO:0004526 F ribonuclease P activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005655 C nucleolar ribonuclease P complex
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008033 P tRNA processing
GO:0016787 F hydrolase activity
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
4910 O_BomoEE1441_internal:A_BomoEE_comp30928_c0_seq1
207bp
 PREDICTED:_ankyrin-3-like,_partial_[Bombyx_mori]
GO:0002027 P regulation of heart rate
GO:0003283 P atrial septum development
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006874 P cellular calcium ion homeostasis
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0007165 P signal transduction
GO:0007399 P nervous system development
GO:0008093 F cytoskeletal anchor activity
GO:0010628 P positive regulation of gene expression
GO:0010881 P regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion
GO:0010882 P regulation of cardiac muscle contraction by calcium ion signaling
GO:0014704 C intercalated disc
GO:0016020 C membrane
GO:0016323 C basolateral plasma membrane
GO:0016324 C apical plasma membrane
GO:0019899 F enzyme binding
GO:0019901 F protein kinase binding
GO:0030018 C Z disc
GO:0030054 C cell junction
GO:0030315 C T-tubule
GO:0030507 F spectrin binding
GO:0030674 F protein-macromolecule adaptor activity
GO:0030913 P paranodal junction assembly
GO:0031430 C M band
GO:0031647 P regulation of protein stability
GO:0031672 C A band
GO:0033292 P T-tubule organization
GO:0033365 P protein localization to organelle
GO:0034394 P protein localization to cell surface
GO:0034613 P cellular protein localization
GO:0036309 P protein localization to M-band
GO:0036371 P protein localization to T-tubule
GO:0042383 C sarcolemma
GO:0043005 C neuron projection
GO:0043034 C costamere
GO:0043268 P positive regulation of potassium ion transport
GO:0044325 F transmembrane transporter binding
GO:0045121 C membrane raft
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0050821 P protein stabilization
GO:0051117 F ATPase binding
GO:0051279 P regulation of release of sequestered calcium ion into cytosol
GO:0051597 P response to methylmercury
GO:0051924 P regulation of calcium ion transport
GO:0051928 P positive regulation of calcium ion transport
GO:0055117 P regulation of cardiac muscle contraction
GO:0060307 P regulation of ventricular cardiac muscle cell membrane repolarization
GO:0070296 P sarcoplasmic reticulum calcium ion transport
GO:0070972 P protein localization to endoplasmic reticulum
GO:0072659 P protein localization to plasma membrane
GO:0072661 P protein localization to plasma membrane
GO:0086004 P regulation of cardiac muscle cell contraction
GO:0086005 P ventricular cardiac muscle cell action potential
GO:0086014 P atrial cardiac muscle cell action potential
GO:0086015 P SA node cell action potential
GO:0086046 P membrane depolarization during SA node cell action potential
GO:0086066 P atrial cardiac muscle cell to AV node cell communication
GO:0086070 P SA node cell to atrial cardiac muscle cell communication
GO:0086091 P regulation of heart rate by cardiac conduction
GO:0098907 P regulation of SA node cell action potential
GO:0098910 P regulation of atrial cardiac muscle cell action potential
GO:1901018 P positive regulation of potassium ion transmembrane transporter activity
GO:1901019 P regulation of calcium ion transmembrane transporter activity
GO:1901021 P positive regulation of calcium ion transmembrane transporter activity
GO:2001259 P positive regulation of cation channel activity
4911 O_BomoEE14420_complete:A_BomoEE_comp67777_c0_seq3
341bp
 PREDICTED:_ribonuclease_P_protein_subunit_p40-like_[Amyelois_transitella]
GO:0001682 P tRNA 5'-leader removal
GO:0004526 F ribonuclease P activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005655 C nucleolar ribonuclease P complex
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008033 P tRNA processing
GO:0016787 F hydrolase activity
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
4912 O_BomoEE14421_5prime_partial:A_BomoEE_comp67780_c0_seq1
103bp
4913 O_BomoEE14422_5prime_partial:A_BomoEE_comp67780_c1_seq1
136bp
 PREDICTED:_uncharacterized_protein_LOC105395418_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0030430 C host cell cytoplasm
GO:0042025 C host cell nucleus
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0075713 P establishment of integrated proviral latency
GO:0075732 P viral penetration into host nucleus
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
4914 O_BomoEE14423_complete:A_BomoEE_comp67784_c0_seq1
433bp
 PREDICTED:_nitrilase_homolog_1_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005575 C cellular_component
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006807 P nitrogen compound metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0047710 F bis(5'-adenosyl)-triphosphatase activity
4915 O_BomoEE14424_5prime_partial:A_BomoEE_comp67784_c0_seq1
144bp
4916 O_BomoEE14425_complete:A_BomoEE_comp67784_c0_seq4
502bp
 PREDICTED:_nitrilase_homolog_1_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005575 C cellular_component
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006807 P nitrogen compound metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0047710 F bis(5'-adenosyl)-triphosphatase activity
4917 O_BomoEE14426_complete:A_BomoEE_comp67784_c0_seq4
116bp
4918 O_BomoEE14427_complete:A_BomoEE_comp67784_c0_seq5
464bp
 PREDICTED:_nitrilase_homolog_1_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005575 C cellular_component
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006807 P nitrogen compound metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0047710 F bis(5'-adenosyl)-triphosphatase activity
4919 O_BomoEE14428_5prime_partial:A_BomoEE_comp67784_c0_seq5
144bp
4920 O_BomoEE14429_complete:A_BomoEE_comp67784_c0_seq6
471bp
 PREDICTED:_nitrilase_homolog_1_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005575 C cellular_component
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006807 P nitrogen compound metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0047710 F bis(5'-adenosyl)-triphosphatase activity
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