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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4831 O_BomoEE14349_complete:A_BomoEE_comp67745_c0_seq1
108bp
4832 O_BomoEE1434_complete:A_BomoEE_comp30820_c0_seq1
107bp
4833 O_BomoEE14350_complete:A_BomoEE_comp67745_c0_seq2
570bp
 PREDICTED:_lysosome_membrane_protein_2_[Papilio_polytes]
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4834 O_BomoEE14351_complete:A_BomoEE_comp67745_c0_seq2
108bp
4835 O_BomoEE14352_5prime_partial:A_BomoEE_comp67745_c0_seq2
102bp
4836 O_BomoEE14353_5prime_partial:A_BomoEE_comp67746_c0_seq1
269bp
 PREDICTED:_DNA-directed_RNA_polymerase_II_subunit_RPB1-like_[Bombyx_mori]
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006094 P gluconeogenesis
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008140 F cAMP response element binding protein binding
GO:0016032 P viral process
GO:0032793 P positive regulation of CREB transcription factor activity
GO:0042593 P glucose homeostasis
GO:0043970 P histone H3-K9 acetylation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051289 P protein homotetramerization
GO:0070062 C extracellular exosome
GO:1901998 P toxin transport
4837 O_BomoEE14354_5prime_partial:A_BomoEE_comp67746_c0_seq2
285bp
 PREDICTED:_DNA-directed_RNA_polymerase_II_subunit_RPB1-like_[Bombyx_mori]
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006094 P gluconeogenesis
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008140 F cAMP response element binding protein binding
GO:0016032 P viral process
GO:0032793 P positive regulation of CREB transcription factor activity
GO:0042593 P glucose homeostasis
GO:0043970 P histone H3-K9 acetylation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051289 P protein homotetramerization
GO:0070062 C extracellular exosome
GO:1901998 P toxin transport
4838 O_BomoEE14355_complete:A_BomoEE_comp67746_c0_seq3
196bp
 PREDICTED:_DNA-directed_RNA_polymerase_II_subunit_RPB1-like_[Bombyx_mori]
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006094 P gluconeogenesis
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008140 F cAMP response element binding protein binding
GO:0016032 P viral process
GO:0032793 P positive regulation of CREB transcription factor activity
GO:0042593 P glucose homeostasis
GO:0043970 P histone H3-K9 acetylation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051289 P protein homotetramerization
GO:0070062 C extracellular exosome
GO:1901998 P toxin transport
4839 O_BomoEE14356_internal:A_BomoEE_comp67751_c0_seq1
230bp
 PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0030430 C host cell cytoplasm
GO:0042025 C host cell nucleus
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0075713 P establishment of integrated proviral latency
GO:0075732 P viral penetration into host nucleus
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
4840 O_BomoEE14357_internal:A_BomoEE_comp67751_c1_seq1
109bp
 PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4841 O_BomoEE14358_internal:A_BomoEE_comp67755_c0_seq1
229bp
 PREDICTED:_microtubule-associated_protein_futsch_[Bombyx_mori]
4842 O_BomoEE14359_complete:A_BomoEE_comp67755_c0_seq1
163bp
4843 O_BomoEE1435_5prime_partial:A_BomoEE_comp30820_c0_seq2
196bp
 PREDICTED:_zinc_finger_protein_233-like_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
4844 O_BomoEE14360_5prime_partial:A_BomoEE_comp67755_c0_seq1
116bp
4845 O_BomoEE14361_3prime_partial:A_BomoEE_comp67755_c0_seq1
99bp
4846 O_BomoEE14362_internal:A_BomoEE_comp67755_c0_seq2
240bp
 PREDICTED:_microtubule-associated_protein_futsch_[Bombyx_mori]
4847 O_BomoEE14363_complete:A_BomoEE_comp67755_c0_seq2
163bp
4848 O_BomoEE14364_5prime_partial:A_BomoEE_comp67755_c0_seq2
116bp
4849 O_BomoEE14365_3prime_partial:A_BomoEE_comp67755_c0_seq2
99bp
4850 O_BomoEE14366_5prime_partial:A_BomoEE_comp67768_c0_seq2
281bp
 PREDICTED:_fasciclin-3_isoform_X2_[Bombyx_mori]
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007416 P synapse assembly
GO:0007611 P learning or memory
GO:0007613 P memory
GO:0007616 P long-term memory
GO:0008345 P larval locomotory behavior
GO:0008355 P olfactory learning
GO:0040011 P locomotion
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048813 P dendrite morphogenesis
GO:0050773 P regulation of dendrite development
4851 O_BomoEE14367_complete:A_BomoEE_comp67769_c0_seq1
268bp
 PREDICTED:_zinc_finger_SWIM_domain-containing_protein_8-like_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
4852 O_BomoEE14368_complete:A_BomoEE_comp67769_c0_seq2
539bp
 PREDICTED:_zinc_finger_SWIM_domain-containing_protein_8-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
4853 O_BomoEE14369_3prime_partial:A_BomoEE_comp67769_c0_seq3
566bp
 PREDICTED:_zinc_finger_SWIM_domain-containing_protein_8-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
4854 O_BomoEE1436_complete:A_BomoEE_comp30820_c0_seq2
176bp
4855 O_BomoEE14370_3prime_partial:A_BomoEE_comp67769_c0_seq3
120bp
4856 O_BomoEE14371_complete:A_BomoEE_comp67771_c0_seq1
237bp
 hypothetical_protein_KGM_22373_[Danaus_plexippus]
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0019137 F thioglucosidase activity
GO:0046872 F metal ion binding
4857 O_BomoEE14372_complete:A_BomoEE_comp67771_c0_seq1
122bp
 hypothetical_protein_KGM_22373_[Danaus_plexippus]
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0008422 F beta-glucosidase activity
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:1901657 P glycosyl compound metabolic process
4858 O_BomoEE14373_complete:A_BomoEE_comp67771_c0_seq1
115bp
4859 O_BomoEE14374_complete:A_BomoEE_comp67771_c0_seq2
122bp
 hypothetical_protein_KGM_22373_[Danaus_plexippus]
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0008422 F beta-glucosidase activity
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:1901657 P glycosyl compound metabolic process
4860 O_BomoEE14375_complete:A_BomoEE_comp67771_c0_seq2
121bp
 PREDICTED:_myrosinase_1-like_[Papilio_polytes]
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005903 C brush border
GO:0005975 P carbohydrate metabolic process
GO:0008422 F beta-glucosidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1901657 P glycosyl compound metabolic process
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