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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4441 O_BomoEE13999_5prime_partial:A_BomoEE_comp67424_c0_seq3
109bp
4442 O_BomoEE1399_3prime_partial:A_BomoEE_comp30172_c0_seq1
138bp
4443 O_BomoEE139_5prime_partial:A_BomoEE_comp2448_c0_seq2
118bp
4444 O_BomoEE13_internal:A_BomoEE_comp238_c1_seq1
121bp
 PREDICTED:_cytochrome_b5-related_protein-like_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0006629 P lipid metabolic process
GO:0009055 F electron transfer activity
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
4445 O_BomoEE14000_5prime_partial:A_BomoEE_comp67424_c0_seq4
362bp
 PREDICTED:_GA-binding_protein_subunit_beta-2_[Bombyx_mori]
4446 O_BomoEE14001_5prime_partial:A_BomoEE_comp67424_c0_seq4
109bp
4447 O_BomoEE14002_3prime_partial:A_BomoEE_comp67426_c0_seq4
636bp
 PREDICTED:_ATPase_family_AAA_domain-containing_protein_2-like_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003682 F chromatin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0016887 F ATP hydrolysis activity
GO:0031936 P obsolete negative regulation of chromatin silencing
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070577 F lysine-acetylated histone binding
4448 O_BomoEE14003_complete:A_BomoEE_comp67426_c0_seq4
225bp
4449 O_BomoEE14004_5prime_partial:A_BomoEE_comp67426_c0_seq4
163bp
 hypothetical_protein_J07HX64_00545_[halophilic_archaeon_J07HX64]
4450 O_BomoEE14005_complete:A_BomoEE_comp67426_c0_seq4
159bp
 ribosome_biogenesis_ATPase_RIX7_[Candida_tropicalis_MYA-3404]
4451 O_BomoEE14006_complete:A_BomoEE_comp67426_c0_seq4
138bp
4452 O_BomoEE14007_3prime_partial:A_BomoEE_comp67426_c0_seq5
636bp
 PREDICTED:_ATPase_family_AAA_domain-containing_protein_2-like_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003682 F chromatin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0016887 F ATP hydrolysis activity
GO:0031936 P obsolete negative regulation of chromatin silencing
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070577 F lysine-acetylated histone binding
4453 O_BomoEE14008_complete:A_BomoEE_comp67426_c0_seq5
225bp
4454 O_BomoEE14009_5prime_partial:A_BomoEE_comp67426_c0_seq5
163bp
 hypothetical_protein_J07HX64_00545_[halophilic_archaeon_J07HX64]
4455 O_BomoEE1400_complete:A_BomoEE_comp30184_c0_seq1
115bp
4456 O_BomoEE14010_complete:A_BomoEE_comp67426_c0_seq5
159bp
 ribosome_biogenesis_ATPase_RIX7_[Candida_tropicalis_MYA-3404]
4457 O_BomoEE14011_complete:A_BomoEE_comp67426_c0_seq5
138bp
4458 O_BomoEE14012_3prime_partial:A_BomoEE_comp67426_c0_seq7
701bp
 PREDICTED:_ATPase_family_AAA_domain-containing_protein_2-like_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003682 F chromatin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0016887 F ATP hydrolysis activity
GO:0031936 P obsolete negative regulation of chromatin silencing
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070577 F lysine-acetylated histone binding
4459 O_BomoEE14013_complete:A_BomoEE_comp67426_c0_seq7
225bp
4460 O_BomoEE14014_5prime_partial:A_BomoEE_comp67426_c0_seq7
163bp
 hypothetical_protein_J07HX64_00545_[halophilic_archaeon_J07HX64]
4461 O_BomoEE14015_complete:A_BomoEE_comp67426_c0_seq7
159bp
 ribosome_biogenesis_ATPase_RIX7_[Candida_tropicalis_MYA-3404]
4462 O_BomoEE14016_complete:A_BomoEE_comp67426_c0_seq7
138bp
4463 O_BomoEE14017_3prime_partial:A_BomoEE_comp67426_c0_seq8
701bp
 PREDICTED:_ATPase_family_AAA_domain-containing_protein_2-like_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003682 F chromatin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0016887 F ATP hydrolysis activity
GO:0031936 P obsolete negative regulation of chromatin silencing
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070577 F lysine-acetylated histone binding
4464 O_BomoEE14018_complete:A_BomoEE_comp67426_c0_seq8
225bp
4465 O_BomoEE14019_5prime_partial:A_BomoEE_comp67426_c0_seq8
163bp
 hypothetical_protein_J07HX64_00545_[halophilic_archaeon_J07HX64]
4466 O_BomoEE1401_complete:A_BomoEE_comp30207_c0_seq1
112bp
4467 O_BomoEE14020_complete:A_BomoEE_comp67426_c0_seq8
159bp
 ribosome_biogenesis_ATPase_RIX7_[Candida_tropicalis_MYA-3404]
4468 O_BomoEE14021_complete:A_BomoEE_comp67426_c0_seq8
138bp
4469 O_BomoEE14022_complete:A_BomoEE_comp67428_c0_seq1
407bp
 PREDICTED:_integrator_complex_subunit_4_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0016180 P snRNA processing
GO:0032039 C integrator complex
GO:0042795 P snRNA transcription by RNA polymerase II
4470 O_BomoEE14023_complete:A_BomoEE_comp67428_c0_seq1
203bp
 PREDICTED:_steroid_receptor_RNA_activator_1-like_[Plutella_xylostella]
GO:0003677 F DNA binding
GO:0003712 F transcription coregulator activity
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0005831 C steroid hormone aporeceptor complex
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0008283 P cell population proliferation
GO:0010861 F obsolete thyroid hormone receptor coactivator activity
GO:0015630 C microtubule cytoskeleton
GO:0030154 P cell differentiation
GO:0030374 F nuclear receptor coactivator activity
GO:0030529 C ribonucleoprotein complex
GO:0031252 C cell leading edge
GO:0042981 P regulation of apoptotic process
GO:0045171 C intercellular bridge
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:2000273 P positive regulation of signaling receptor activity
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