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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3991 O_BomoEE13593_internal:A_BomoEE_comp67138_c0_seq1
2449bp
 PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC2_[Amyelois_transitella]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
3992 O_BomoEE13594_complete:A_BomoEE_comp67138_c0_seq1
113bp
3993 O_BomoEE13595_complete:A_BomoEE_comp67139_c0_seq1
344bp
 PREDICTED:_phosphoglycolate_phosphatase-like_[Amyelois_transitella]
GO:0000121 F glycerol-1-phosphatase activity
GO:0000287 F magnesium ion binding
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006114 P glycerol biosynthetic process
GO:0006650 P glycerophospholipid metabolic process
GO:0008152 P metabolic process
GO:0008967 F phosphoglycolate phosphatase activity
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0043136 F glycerol-3-phosphatase activity
GO:0045721 P negative regulation of gluconeogenesis
GO:0046872 F metal ion binding
GO:0098519 F nucleotide phosphatase activity, acting on free nucleotides
3994 O_BomoEE13596_complete:A_BomoEE_comp67139_c0_seq2
288bp
 PREDICTED:_phosphoglycolate_phosphatase-like_[Plutella_xylostella]
GO:0000121 F glycerol-1-phosphatase activity
GO:0000287 F magnesium ion binding
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006114 P glycerol biosynthetic process
GO:0006650 P glycerophospholipid metabolic process
GO:0008152 P metabolic process
GO:0008967 F phosphoglycolate phosphatase activity
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0043136 F glycerol-3-phosphatase activity
GO:0045721 P negative regulation of gluconeogenesis
GO:0046872 F metal ion binding
GO:0098519 F nucleotide phosphatase activity, acting on free nucleotides
3995 O_BomoEE13597_complete:A_BomoEE_comp67139_c0_seq3
162bp
 PREDICTED:_phosphoglycolate_phosphatase-like_[Amyelois_transitella]
GO:0000121 F glycerol-1-phosphatase activity
GO:0000287 F magnesium ion binding
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006114 P glycerol biosynthetic process
GO:0006650 P glycerophospholipid metabolic process
GO:0008152 P metabolic process
GO:0008967 F phosphoglycolate phosphatase activity
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0043136 F glycerol-3-phosphatase activity
GO:0045721 P negative regulation of gluconeogenesis
GO:0046872 F metal ion binding
GO:0098519 F nucleotide phosphatase activity, acting on free nucleotides
3996 O_BomoEE13598_complete:A_BomoEE_comp67139_c0_seq3
133bp
 PREDICTED:_phosphoglycolate_phosphatase-like_isoform_X1_[Papilio_xuthus]
GO:0000287 F magnesium ion binding
GO:0004035 F alkaline phosphatase activity
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0008152 P metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0046196 P 4-nitrophenol catabolic process
3997 O_BomoEE13599_complete:A_BomoEE_comp67139_c0_seq4
162bp
 PREDICTED:_phosphoglycolate_phosphatase-like_[Amyelois_transitella]
GO:0000121 F glycerol-1-phosphatase activity
GO:0000287 F magnesium ion binding
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006114 P glycerol biosynthetic process
GO:0006650 P glycerophospholipid metabolic process
GO:0008152 P metabolic process
GO:0008967 F phosphoglycolate phosphatase activity
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0043136 F glycerol-3-phosphatase activity
GO:0045721 P negative regulation of gluconeogenesis
GO:0046872 F metal ion binding
GO:0098519 F nucleotide phosphatase activity, acting on free nucleotides
3998 O_BomoEE1359_5prime_partial:A_BomoEE_comp29651_c0_seq1
114bp
3999 O_BomoEE135_5prime_partial:A_BomoEE_comp2431_c1_seq2
103bp
4000 O_BomoEE13600_complete:A_BomoEE_comp67141_c1_seq1
1438bp
 PREDICTED:_myosin-IIIb-like_isoform_X1_[Bombyx_mori]
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0007601 P visual perception
GO:0007605 P sensory perception of sound
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016459 C myosin complex
GO:0016740 F transferase activity
GO:0030175 C filopodium
GO:0030898 F microfilament motor activity
GO:0031941 C filamentous actin
GO:0043531 F ADP binding
GO:0046777 P protein autophosphorylation
GO:0050896 P response to stimulus
GO:0060002 F plus-end directed microfilament motor activity
4001 O_BomoEE13601_complete:A_BomoEE_comp67141_c1_seq1
109bp
4002 O_BomoEE13602_complete:A_BomoEE_comp67141_c1_seq1
107bp
4003 O_BomoEE13603_internal:A_BomoEE_comp67145_c0_seq1
282bp
 Zinc_finger_SWIM_domain-containing_protein_5_[Papilio_xuthus]
GO:0005615 C extracellular space
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
4004 O_BomoEE13604_5prime_partial:A_BomoEE_comp67145_c0_seq1
201bp
 PREDICTED:_zinc_finger_SWIM_domain-containing_protein_4_isoform_X3_[Physeter_catodon]
4005 O_BomoEE13605_complete:A_BomoEE_comp67145_c0_seq1
138bp
4006 O_BomoEE13606_complete:A_BomoEE_comp67149_c0_seq1
185bp
 PREDICTED:_peptidyl-prolyl_cis-trans_isomerase_H_[Amyelois_transitella]
GO:0000398 P mRNA splicing, via spliceosome
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006457 P protein folding
GO:0006461 P protein-containing complex assembly
GO:0008380 P RNA splicing
GO:0016018 F cyclosporin A binding
GO:0016607 C nuclear speck
GO:0016853 F isomerase activity
GO:0043021 F ribonucleoprotein complex binding
GO:0045070 P positive regulation of viral genome replication
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071001 C U4/U6 snRNP
4007 O_BomoEE13607_complete:A_BomoEE_comp67149_c0_seq1
153bp
 Uncharacterized_protein_OBRU01_09759_[Operophtera_brumata]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
4008 O_BomoEE13608_complete:A_BomoEE_comp67149_c0_seq2
222bp
 Uncharacterized_protein_OBRU01_09759_[Operophtera_brumata]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
4009 O_BomoEE13609_complete:A_BomoEE_comp67149_c0_seq2
185bp
 PREDICTED:_peptidyl-prolyl_cis-trans_isomerase_H_[Amyelois_transitella]
GO:0000398 P mRNA splicing, via spliceosome
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006457 P protein folding
GO:0006461 P protein-containing complex assembly
GO:0008380 P RNA splicing
GO:0016018 F cyclosporin A binding
GO:0016607 C nuclear speck
GO:0016853 F isomerase activity
GO:0043021 F ribonucleoprotein complex binding
GO:0045070 P positive regulation of viral genome replication
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071001 C U4/U6 snRNP
4010 O_BomoEE1360_complete:A_BomoEE_comp29652_c0_seq1
499bp
 PREDICTED:_synaptotagmin-5_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0030658 C transport vesicle membrane
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0042584 C chromaffin granule membrane
GO:0045202 C synapse
GO:0046872 F metal ion binding
4011 O_BomoEE13610_complete:A_BomoEE_comp67150_c0_seq1
115bp
4012 O_BomoEE13611_complete:A_BomoEE_comp67150_c0_seq2
115bp
4013 O_BomoEE13612_complete:A_BomoEE_comp67153_c0_seq1
420bp
 putative_monocarboxylate_transporter_[Danaus_plexippus]
GO:0005308 F creatine transmembrane transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0015129 F lactate transmembrane transporter activity
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035879 P plasma membrane lactate transport
GO:0055085 P transmembrane transport
GO:1902598 P creatine transmembrane transport
4014 O_BomoEE13613_complete:A_BomoEE_comp67153_c0_seq1
117bp
 Monocarboxylate_transporter_14_[Papilio_machaon]
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008028 F monocarboxylic acid transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015718 P monocarboxylic acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
4015 O_BomoEE13614_complete:A_BomoEE_comp67153_c0_seq1
103bp
4016 O_BomoEE13615_complete:A_BomoEE_comp67153_c0_seq2
528bp
 PREDICTED:_monocarboxylate_transporter_12_[Papilio_polytes]
GO:0005308 F creatine transmembrane transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0015129 F lactate transmembrane transporter activity
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035879 P plasma membrane lactate transport
GO:0055085 P transmembrane transport
GO:1902598 P creatine transmembrane transport
4017 O_BomoEE13616_complete:A_BomoEE_comp67153_c0_seq2
103bp
4018 O_BomoEE13617_internal:A_BomoEE_comp67159_c0_seq1
194bp
 PREDICTED:_uncharacterized_protein_LOC101742562_[Bombyx_mori]
4019 O_BomoEE13618_5prime_partial:A_BomoEE_comp67159_c1_seq2
250bp
 PREDICTED:_uncharacterized_protein_LOC101742562_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030904 C retromer complex
GO:0034314 P Arp2/3 complex-mediated actin nucleation
GO:0042147 P retrograde transport, endosome to Golgi
GO:0042752 P regulation of circadian rhythm
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048511 P rhythmic process
GO:0051127 P positive regulation of actin nucleation
GO:0070534 P protein K63-linked ubiquitination
4020 O_BomoEE13619_complete:A_BomoEE_comp67161_c0_seq1
383bp
 PREDICTED:_oocyte_zinc_finger_protein_XlCOF6-like_isoform_X2_[Bombyx_mori]
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007601 P visual perception
GO:0007605 P sensory perception of sound
GO:0009649 P entrainment of circadian clock
GO:0010114 P response to red light
GO:0035271 P ring gland development
GO:0042051 P compound eye photoreceptor development
GO:0043153 P entrainment of circadian clock by photoperiod
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
GO:0060086 P circadian temperature homeostasis
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