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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3841 O_BomoEE13458_complete:A_BomoEE_comp67004_c2_seq4
653bp
 PREDICTED:_cleavage_and_polyadenylation_specificity_factor_subunit_CG7185_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005849 C mRNA cleavage factor complex
GO:0006378 P mRNA polyadenylation
GO:0006397 P mRNA processing
3842 O_BomoEE13459_complete:A_BomoEE_comp67004_c2_seq4
216bp
3843 O_BomoEE1345_3prime_partial:A_BomoEE_comp29448_c0_seq1
588bp
 PREDICTED:_integrin_alpha-PS2_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007160 P cell-matrix adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0007298 P border follicle cell migration
GO:0007411 P axon guidance
GO:0007414 P axonal defasciculation
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007431 P salivary gland development
GO:0007435 P salivary gland morphogenesis
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007494 P midgut development
GO:0007608 P sensory perception of smell
GO:0008305 C integrin complex
GO:0008360 P regulation of cell shape
GO:0009925 C basal plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016203 P muscle attachment
GO:0016324 C apical plasma membrane
GO:0016328 C lateral plasma membrane
GO:0016337 P cell-cell adhesion
GO:0016477 P cell migration
GO:0021551 P central nervous system morphogenesis
GO:0030239 P myofibril assembly
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0035099 P hemocyte migration
GO:0035160 P maintenance of epithelial integrity, open tracheal system
GO:0042383 C sarcolemma
GO:0045185 P maintenance of protein location
GO:0045214 P sarcomere organization
GO:0046982 F protein heterodimerization activity
GO:0050839 F cell adhesion molecule binding
GO:0050840 F extracellular matrix binding
GO:0050896 P response to stimulus
GO:0051492 P regulation of stress fiber assembly
GO:1990430 F extracellular matrix protein binding
3844 O_BomoEE13460_complete:A_BomoEE_comp67004_c2_seq4
162bp
3845 O_BomoEE13461_complete:A_BomoEE_comp67006_c0_seq1
1089bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_cadherin-87A_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032420 C stereocilium
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0060122 P inner ear receptor cell stereocilium organization
3846 O_BomoEE13462_3prime_partial:A_BomoEE_comp67006_c0_seq1
179bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_cadherin-87A_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032420 C stereocilium
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0060122 P inner ear receptor cell stereocilium organization
3847 O_BomoEE13463_complete:A_BomoEE_comp67006_c0_seq1
136bp
3848 O_BomoEE13464_complete:A_BomoEE_comp67006_c0_seq3
1089bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_cadherin-87A_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032420 C stereocilium
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0060122 P inner ear receptor cell stereocilium organization
3849 O_BomoEE13465_3prime_partial:A_BomoEE_comp67006_c0_seq3
179bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_cadherin-87A_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032420 C stereocilium
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0060122 P inner ear receptor cell stereocilium organization
3850 O_BomoEE13466_complete:A_BomoEE_comp67006_c0_seq3
136bp
3851 O_BomoEE13467_complete:A_BomoEE_comp67006_c0_seq4
627bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_cadherin-87A_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032420 C stereocilium
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0060122 P inner ear receptor cell stereocilium organization
3852 O_BomoEE13468_complete:A_BomoEE_comp67006_c0_seq4
418bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_cadherin-87A_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032420 C stereocilium
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0060122 P inner ear receptor cell stereocilium organization
3853 O_BomoEE13469_3prime_partial:A_BomoEE_comp67006_c0_seq4
179bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_cadherin-87A_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032420 C stereocilium
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0060122 P inner ear receptor cell stereocilium organization
3854 O_BomoEE1346_internal:A_BomoEE_comp29451_c1_seq1
112bp
3855 O_BomoEE13470_complete:A_BomoEE_comp67006_c0_seq4
136bp
3856 O_BomoEE13471_complete:A_BomoEE_comp67006_c0_seq5
627bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_cadherin-87A_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032420 C stereocilium
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0060122 P inner ear receptor cell stereocilium organization
3857 O_BomoEE13472_complete:A_BomoEE_comp67006_c0_seq5
418bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_cadherin-87A_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032420 C stereocilium
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0060122 P inner ear receptor cell stereocilium organization
3858 O_BomoEE13473_3prime_partial:A_BomoEE_comp67006_c0_seq5
179bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_cadherin-87A_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032420 C stereocilium
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0060122 P inner ear receptor cell stereocilium organization
3859 O_BomoEE13474_complete:A_BomoEE_comp67006_c0_seq5
136bp
3860 O_BomoEE13475_complete:A_BomoEE_comp67007_c0_seq1
139bp
3861 O_BomoEE13476_5prime_partial:A_BomoEE_comp67016_c1_seq1
201bp
 PREDICTED:_probable_cytochrome_P450_301a1,_mitochondrial_[Amyelois_transitella]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005739 C mitochondrion
GO:0007490 P tergite morphogenesis
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031966 C mitochondrial membrane
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
3862 O_BomoEE13477_5prime_partial:A_BomoEE_comp67016_c1_seq3
533bp
 PREDICTED:_probable_cytochrome_P450_301a1,_mitochondrial_[Amyelois_transitella]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005739 C mitochondrion
GO:0007490 P tergite morphogenesis
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031966 C mitochondrial membrane
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
3863 O_BomoEE13478_complete:A_BomoEE_comp67016_c1_seq3
169bp
3864 O_BomoEE13479_internal:A_BomoEE_comp67023_c0_seq1
262bp
 PREDICTED:_uncharacterized_protein_LOC101742449,_partial_[Bombyx_mori]
3865 O_BomoEE1347_complete:A_BomoEE_comp29466_c0_seq1
131bp
3866 O_BomoEE13480_internal:A_BomoEE_comp67026_c0_seq2
177bp
 PREDICTED:_fat-like_cadherin-related_tumor_suppressor_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007293 P germarium-derived egg chamber formation
GO:0007295 P growth of a germarium-derived egg chamber
GO:0007424 P open tracheal system development
GO:0007431 P salivary gland development
GO:0007440 P foregut morphogenesis
GO:0007442 P hindgut morphogenesis
GO:0009925 C basal plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0030950 P establishment or maintenance of actin cytoskeleton polarity
GO:0042247 P establishment of planar polarity of follicular epithelium
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045089 P positive regulation of innate immune response
GO:0045571 P negative regulation of imaginal disc growth
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0050839 F cell adhesion molecule binding
GO:0060429 P epithelium development
3867 O_BomoEE13481_5prime_partial:A_BomoEE_comp67026_c0_seq2
163bp
3868 O_BomoEE13482_5prime_partial:A_BomoEE_comp67026_c0_seq2
111bp
3869 O_BomoEE13483_3prime_partial:A_BomoEE_comp67028_c0_seq1
108bp
3870 O_BomoEE13484_complete:A_BomoEE_comp67031_c0_seq1
752bp
 PREDICTED:_long-chain-fatty-acid--CoA_ligase_5_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:0035338 P long-chain fatty-acyl-CoA biosynthetic process
GO:2001236 P regulation of extrinsic apoptotic signaling pathway
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