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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3451 O_BomoEE13106_3prime_partial:A_BomoEE_comp66644_c0_seq2
351bp
 PREDICTED:_uncharacterized_protein_LOC106142506_[Amyelois_transitella]
GO:0001726 C ruffle
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007009 P plasma membrane organization
GO:0008093 F cytoskeletal anchor activity
GO:0008286 P insulin receptor signaling pathway
GO:0008360 P regulation of cell shape
GO:0009617 P response to bacterium
GO:0014069 C postsynaptic density
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0016358 P dendrite development
GO:0030141 C secretory granule
GO:0030165 F PDZ domain binding
GO:0030175 C filopodium
GO:0030838 P positive regulation of actin filament polymerization
GO:0032956 P regulation of actin cytoskeleton organization
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043197 C dendritic spine
GO:0048167 P regulation of synaptic plasticity
GO:0051017 P actin filament bundle assembly
GO:0051764 P actin crosslink formation
GO:0061003 P positive regulation of dendritic spine morphogenesis
GO:0070062 C extracellular exosome
GO:0070064 F proline-rich region binding
GO:0097481 C postsynaptic density
GO:2000251 P positive regulation of actin cytoskeleton reorganization
3452 O_BomoEE13107_5prime_partial:A_BomoEE_comp66644_c0_seq2
107bp
3453 O_BomoEE13108_complete:A_BomoEE_comp66646_c0_seq1
130bp
3454 O_BomoEE13109_5prime_partial:A_BomoEE_comp66646_c0_seq2
157bp
 PREDICTED:_lipopolysaccharide-induced_tumor_necrosis_factor-alpha_factor_homolog_[Bombyx_mori]
GO:0001817 P regulation of cytokine production
GO:0004871 F obsolete signal transducer activity
GO:0005576 C extracellular region
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0007568 P aging
GO:0016020 C membrane
GO:0032496 P response to lipopolysaccharide
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 C intracellular membrane-bounded organelle
GO:0050699 F WW domain binding
GO:0071222 P cellular response to lipopolysaccharide
3455 O_BomoEE1310_complete:A_BomoEE_comp28694_c0_seq2
198bp
3456 O_BomoEE13110_internal:A_BomoEE_comp66648_c0_seq1
150bp
 PREDICTED:_putative_uncharacterized_protein_DDB_G0271606_[Bombyx_mori]
3457 O_BomoEE13111_5prime_partial:A_BomoEE_comp66648_c0_seq1
116bp
3458 O_BomoEE13112_internal:A_BomoEE_comp66648_c0_seq2
113bp
 PREDICTED:_putative_uncharacterized_protein_DDB_G0271606_[Bombyx_mori]
3459 O_BomoEE13113_internal:A_BomoEE_comp66648_c0_seq2
112bp
3460 O_BomoEE13114_5prime_partial:A_BomoEE_comp66648_c0_seq2
104bp
3461 O_BomoEE13115_internal:A_BomoEE_comp66648_c1_seq1
116bp
 PREDICTED:_putative_uncharacterized_protein_DDB_G0271606_[Bombyx_mori]
3462 O_BomoEE13116_5prime_partial:A_BomoEE_comp66649_c0_seq2
189bp
 PREDICTED:_uncharacterized_protein_LOC106712680_[Papilio_machaon]
3463 O_BomoEE13117_5prime_partial:A_BomoEE_comp66649_c0_seq2
135bp
3464 O_BomoEE13118_internal:A_BomoEE_comp66649_c0_seq3
179bp
 PREDICTED:_uncharacterized_protein_LOC106712680_[Papilio_machaon]
3465 O_BomoEE13119_5prime_partial:A_BomoEE_comp66649_c0_seq3
157bp
3466 O_BomoEE1311_5prime_partial:A_BomoEE_comp28702_c0_seq1
101bp
 putative_amine_oxidase_[Operophtera_brumata]
GO:0003677 F DNA binding
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0055114 P obsolete oxidation-reduction process
3467 O_BomoEE13120_3prime_partial:A_BomoEE_comp66657_c0_seq1
422bp
 PREDICTED:_exocyst_complex_component_2_[Bombyx_mori]
GO:0000145 C exocyst
GO:0000281 P mitotic cytokinesis
GO:0005642 C annulate lamellae
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0006893 P Golgi to plasma membrane transport
GO:0007269 P neurotransmitter secretion
GO:0007298 P border follicle cell migration
GO:0007349 P cellularization
GO:0010629 P negative regulation of gene expression
GO:0015031 P protein transport
GO:0016028 C rhabdomere
GO:0016080 P synaptic vesicle targeting
GO:0016081 P synaptic vesicle docking
GO:0016192 P vesicle-mediated transport
GO:0017137 F small GTPase binding
GO:0030136 C clathrin-coated vesicle
GO:0032456 P endocytic recycling
GO:0035003 C subapical complex
GO:0035147 P branch fusion, open tracheal system
GO:0043001 P Golgi to plasma membrane protein transport
GO:0045056 P transcytosis
GO:0045087 P innate immune response
GO:0048215 P positive regulation of Golgi vesicle fusion to target membrane
GO:0048599 P oocyte development
GO:0055037 C recycling endosome
GO:0071896 P protein localization to adherens junction
GO:0072659 P protein localization to plasma membrane
GO:0072697 P protein localization to cell cortex
GO:0098793 C presynapse
3468 O_BomoEE13121_complete:A_BomoEE_comp66660_c0_seq2
1074bp
 PREDICTED:_rho_GTPase-activating_protein_39_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0007165 P signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
3469 O_BomoEE13122_complete:A_BomoEE_comp66660_c0_seq2
127bp
3470 O_BomoEE13123_complete:A_BomoEE_comp66660_c0_seq2
105bp
3471 O_BomoEE13124_5prime_partial:A_BomoEE_comp66661_c0_seq1
219bp
 PREDICTED:_uncharacterized_protein_LOC103512788,_partial_[Diaphorina_citri]
3472 O_BomoEE13125_complete:A_BomoEE_comp66661_c0_seq1
199bp
 Retrovirus-related_Pol_polyprotein_from_type-2_retrotransposable_element_R2DM,_partial_[Exaiptasia_pallida]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
3473 O_BomoEE13126_complete:A_BomoEE_comp66679_c0_seq1
212bp
 short-chain_dehydrogenase/reductase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0003858 F 3-hydroxybutyrate dehydrogenase activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0099617 C matrix side of mitochondrial inner membrane
3474 O_BomoEE13127_complete:A_BomoEE_comp66679_c0_seq2
307bp
 short-chain_dehydrogenase/reductase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0003858 F 3-hydroxybutyrate dehydrogenase activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0099617 C matrix side of mitochondrial inner membrane
3475 O_BomoEE13128_complete:A_BomoEE_comp66681_c0_seq1
172bp
 DNA_primase_[Operophtera_brumata]
3476 O_BomoEE13129_complete:A_BomoEE_comp66687_c0_seq5
141bp
3477 O_BomoEE1312_5prime_partial:A_BomoEE_comp28703_c0_seq1
107bp
3478 O_BomoEE13130_complete:A_BomoEE_comp66696_c0_seq1
697bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_nose_resistant_to_fluoxetine_protein_6-like_[Bombyx_mori]
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
3479 O_BomoEE13131_complete:A_BomoEE_comp66696_c0_seq1
176bp
3480 O_BomoEE13132_complete:A_BomoEE_comp66705_c0_seq1
102bp
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