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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3181 O_BomoEE12864_complete:A_BomoEE_comp66445_c0_seq1
117bp
3182 O_BomoEE12865_complete:A_BomoEE_comp66446_c0_seq1
991bp
 PREDICTED:_uncharacterized_protein_LOC101742002_isoform_X2_[Bombyx_mori]
3183 O_BomoEE12866_complete:A_BomoEE_comp66446_c0_seq1
324bp
 PREDICTED:_uncharacterized_protein_LOC101742002_isoform_X2_[Bombyx_mori]
3184 O_BomoEE12867_complete:A_BomoEE_comp66446_c0_seq1
128bp
3185 O_BomoEE12868_complete:A_BomoEE_comp66446_c0_seq2
638bp
 PREDICTED:_uncharacterized_protein_LOC101742002_isoform_X2_[Bombyx_mori]
3186 O_BomoEE12869_complete:A_BomoEE_comp66446_c0_seq3
1341bp
 PREDICTED:_uncharacterized_protein_LOC101742002_isoform_X2_[Bombyx_mori]
3187 O_BomoEE1286_complete:A_BomoEE_comp28308_c0_seq1
202bp
 hypothetical_protein_[Rhodococcus_sp._HA99]
3188 O_BomoEE12870_complete:A_BomoEE_comp66446_c0_seq3
128bp
3189 O_BomoEE12871_complete:A_BomoEE_comp66446_c0_seq4
1378bp
 PREDICTED:_uncharacterized_protein_LOC101742002_isoform_X1_[Bombyx_mori]
3190 O_BomoEE12872_complete:A_BomoEE_comp66446_c0_seq4
128bp
3191 O_BomoEE12873_complete:A_BomoEE_comp66446_c0_seq5
991bp
 PREDICTED:_uncharacterized_protein_LOC101742002_isoform_X2_[Bombyx_mori]
3192 O_BomoEE12874_complete:A_BomoEE_comp66446_c0_seq5
361bp
 PREDICTED:_uncharacterized_protein_LOC101742002_isoform_X1_[Bombyx_mori]
3193 O_BomoEE12875_complete:A_BomoEE_comp66446_c0_seq5
128bp
3194 O_BomoEE12876_internal:A_BomoEE_comp66450_c0_seq2
294bp
 PREDICTED:_rootletin_[Bombyx_mori]
GO:0001917 C photoreceptor inner segment
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0008104 P protein localization
GO:0010457 P centriole-centriole cohesion
GO:0010669 P epithelial structure maintenance
GO:0015629 C actin cytoskeleton
GO:0019894 F kinesin binding
GO:0030030 P cell projection organization
GO:0032053 P ciliary basal body organization
GO:0033365 P protein localization to organelle
GO:0035253 C ciliary rootlet
GO:0045494 P photoreceptor cell maintenance
GO:0051297 P centrosome cycle
GO:0051656 P establishment of organelle localization
GO:0070062 C extracellular exosome
3195 O_BomoEE12877_5prime_partial:A_BomoEE_comp66450_c0_seq2
132bp
3196 O_BomoEE12878_complete:A_BomoEE_comp66451_c0_seq1
136bp
 putative_acid_cluster_protein_33_[Danaus_plexippus]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0030140 C trans-Golgi network transport vesicle
GO:0042609 F CD4 receptor binding
3197 O_BomoEE12879_complete:A_BomoEE_comp66451_c0_seq2
193bp
 PREDICTED:_maspardin-like_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0030140 C trans-Golgi network transport vesicle
GO:0042609 F CD4 receptor binding
3198 O_BomoEE1287_complete:A_BomoEE_comp28308_c0_seq1
155bp
3199 O_BomoEE12880_complete:A_BomoEE_comp66451_c0_seq3
219bp
 PREDICTED:_maspardin-like_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0030140 C trans-Golgi network transport vesicle
GO:0042609 F CD4 receptor binding
3200 O_BomoEE12881_complete:A_BomoEE_comp66451_c0_seq4
322bp
 PREDICTED:_maspardin-like_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0030140 C trans-Golgi network transport vesicle
GO:0042609 F CD4 receptor binding
3201 O_BomoEE12882_complete:A_BomoEE_comp66452_c0_seq2
409bp
 short-chain_specific_acyl-CoA_dehydrogenase_[Agrotis_segetum]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0004085 F butyryl-CoA dehydrogenase activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0042594 P response to starvation
GO:0046359 P butyrate catabolic process
GO:0050660 F flavin adenine dinucleotide binding
GO:0051289 P protein homotetramerization
GO:0051384 P response to glucocorticoid
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
3202 O_BomoEE12883_complete:A_BomoEE_comp66452_c0_seq2
125bp
 hypothetical_protein_ACD_75C01044G0002_[uncultured_bacterium]
3203 O_BomoEE12884_complete:A_BomoEE_comp66453_c0_seq1
152bp
 PREDICTED:_uncharacterized_protein_LOC101742386_isoform_X1_[Bombyx_mori]
3204 O_BomoEE12885_5prime_partial:A_BomoEE_comp66453_c0_seq2
275bp
 PREDICTED:_uncharacterized_protein_LOC106117433_[Papilio_xuthus]
3205 O_BomoEE12886_complete:A_BomoEE_comp66454_c0_seq1
399bp
 cyclin_dependent_kinase_9_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0051726 P regulation of cell cycle
3206 O_BomoEE12887_complete:A_BomoEE_comp66454_c0_seq1
105bp
3207 O_BomoEE12888_complete:A_BomoEE_comp66454_c0_seq2
333bp
 cyclin_dependent_kinase_9_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0001223 F transcription coactivator binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006282 P regulation of DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007346 P regulation of mitotic cell cycle
GO:0008023 C transcription elongation factor complex
GO:0008024 C cyclin/CDK positive transcription elongation factor complex
GO:0008134 F transcription factor binding
GO:0008283 P cell population proliferation
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0010613 P positive regulation of cardiac muscle hypertrophy
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016605 C PML body
GO:0016740 F transferase activity
GO:0017069 F snRNA binding
GO:0031056 P regulation of histone modification
GO:0031297 P replication fork processing
GO:0033129 P positive regulation of histone phosphorylation
GO:0042493 P response to xenobiotic stimulus
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0043231 C intracellular membrane-bounded organelle
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050434 P positive regulation of viral transcription
GO:0051147 P regulation of muscle cell differentiation
GO:0071157 P regulation of cell cycle
GO:0071345 P cellular response to cytokine stimulus
GO:0097322 F 7SK snRNA binding
GO:1900364 P negative regulation of mRNA polyadenylation
GO:1903839 P positive regulation of mRNA 3'-UTR binding
GO:2001168 P positive regulation of histone H2B ubiquitination
3208 O_BomoEE12889_complete:A_BomoEE_comp66454_c0_seq3
119bp
3209 O_BomoEE1288_internal:A_BomoEE_comp28315_c0_seq1
227bp
 PREDICTED:_protein_bric-a-brac_1,_partial_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003680 F minor groove of adenine-thymine-rich DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005701 C polytene chromosome chromocenter
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007455 P eye-antennal disc morphogenesis
GO:0007478 P leg disc morphogenesis
GO:0019233 P sensory perception of pain
GO:0061040 P female gonad morphogenesis
3210 O_BomoEE12890_complete:A_BomoEE_comp66456_c0_seq1
277bp
 PREDICTED:_acidic_amino_acid_decarboxylase_GADL1-like_[Amyelois_transitella]
GO:0003824 F catalytic activity
GO:0004782 F sulfinoalanine decarboxylase activity
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0019752 P carboxylic acid metabolic process
GO:0030170 F pyridoxal phosphate binding
GO:0042412 P taurine biosynthetic process
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