Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
3061	O_BomoEE12756_3prime_partial:A_BomoEE_comp66285_c0_seq2 1124bp	Bomo_Chr19	PREDICTED:_focadhesin_isoform_X2_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005925 C focal adhesion GO:0008150 P biological_process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0030054 C cell junction
3062	O_BomoEE12757_complete:A_BomoEE_comp66285_c0_seq2 213bp	Bomo_Chr19
3063	O_BomoEE12758_5prime_partial:A_BomoEE_comp66285_c0_seq2 131bp	Bomo_Chr19
3064	O_BomoEE12759_internal:A_BomoEE_comp66285_c0_seq3 334bp	Bomo_Chr19	PREDICTED:_focadhesin_isoform_X2_[Bombyx_mori]
3065	O_BomoEE1275_5prime_partial:A_BomoEE_comp28027_c0_seq1 114bp	Bomo_Chr24
3066	O_BomoEE12760_5prime_partial:A_BomoEE_comp66285_c0_seq3 131bp	Bomo_Chr19
3067	O_BomoEE12761_3prime_partial:A_BomoEE_comp66285_c0_seq4 339bp	Bomo_Chr19	PREDICTED:_focadhesin_isoform_X2_[Bombyx_mori]
3068	O_BomoEE12762_5prime_partial:A_BomoEE_comp66285_c0_seq4 131bp	Bomo_Chr19
3069	O_BomoEE12763_complete:A_BomoEE_comp66293_c1_seq1 793bp	Bomo_Chr5	PREDICTED:_patj_homolog_isoform_X1_[Bombyx_mori]	GO:0001736 P establishment of planar polarity GO:0002009 P morphogenesis of an epithelium GO:0005080 F protein kinase C binding GO:0005515 F protein binding GO:0005635 C nuclear envelope GO:0005737 C cytoplasm GO:0005875 C microtubule associated complex GO:0005886 C plasma membrane GO:0005912 C adherens junction GO:0005918 C septate junction GO:0007043 P cell-cell junction assembly GO:0007163 P establishment or maintenance of cell polarity GO:0007275 P multicellular organism development GO:0008594 P photoreceptor cell morphogenesis GO:0016020 C membrane GO:0016324 C apical plasma membrane GO:0016327 C apicolateral plasma membrane GO:0016332 P establishment or maintenance of polarity of embryonic epithelium GO:0016333 P morphogenesis of follicular epithelium GO:0016334 P establishment or maintenance of polarity of follicular epithelium GO:0032033 F myosin II light chain binding GO:0034332 P adherens junction organization GO:0034334 P adherens junction maintenance GO:0035003 C subapical complex GO:0035088 P establishment or maintenance of apical/basal cell polarity GO:0035209 P pupal development GO:0035509 P negative regulation of myosin-light-chain-phosphatase activity GO:0045176 P apical protein localization GO:0045179 C apical cortex GO:0045186 P zonula adherens assembly GO:0045196 P establishment or maintenance of neuroblast polarity GO:0045494 P photoreceptor cell maintenance
3070	O_BomoEE12764_complete:A_BomoEE_comp66293_c1_seq1 185bp	Bomo_Chr5
3071	O_BomoEE12765_complete:A_BomoEE_comp66293_c1_seq1 112bp	Bomo_Chr5
3072	O_BomoEE12766_complete:A_BomoEE_comp66293_c1_seq2 770bp	Bomo_Chr5	PREDICTED:_patj_homolog_isoform_X1_[Bombyx_mori]	GO:0001736 P establishment of planar polarity GO:0002009 P morphogenesis of an epithelium GO:0005080 F protein kinase C binding GO:0005515 F protein binding GO:0005635 C nuclear envelope GO:0005737 C cytoplasm GO:0005875 C microtubule associated complex GO:0005886 C plasma membrane GO:0005912 C adherens junction GO:0005918 C septate junction GO:0007043 P cell-cell junction assembly GO:0007163 P establishment or maintenance of cell polarity GO:0007275 P multicellular organism development GO:0008594 P photoreceptor cell morphogenesis GO:0016020 C membrane GO:0016324 C apical plasma membrane GO:0016327 C apicolateral plasma membrane GO:0016332 P establishment or maintenance of polarity of embryonic epithelium GO:0016333 P morphogenesis of follicular epithelium GO:0016334 P establishment or maintenance of polarity of follicular epithelium GO:0032033 F myosin II light chain binding GO:0034332 P adherens junction organization GO:0034334 P adherens junction maintenance GO:0035003 C subapical complex GO:0035088 P establishment or maintenance of apical/basal cell polarity GO:0035209 P pupal development GO:0035509 P negative regulation of myosin-light-chain-phosphatase activity GO:0045176 P apical protein localization GO:0045179 C apical cortex GO:0045186 P zonula adherens assembly GO:0045196 P establishment or maintenance of neuroblast polarity GO:0045494 P photoreceptor cell maintenance
3073	O_BomoEE12767_complete:A_BomoEE_comp66293_c1_seq2 185bp	Bomo_Chr5
3074	O_BomoEE12768_complete:A_BomoEE_comp66293_c1_seq2 112bp	Bomo_Chr5
3075	O_BomoEE12769_complete:A_BomoEE_comp66299_c2_seq1 1379bp	Bomo_Chr12	PREDICTED:_protein_kinase_ASK1_isoform_X1_[Bombyx_mori]	GO:0000165 P MAPK cascade GO:0000166 F nucleotide binding GO:0000186 P obsolete activation of MAPKK activity GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0004709 F MAP kinase kinase kinase activity GO:0005524 F ATP binding GO:0005622 C intracellular anatomical structure GO:0006468 P protein phosphorylation GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0046872 F metal ion binding
3076	O_BomoEE1276_internal:A_BomoEE_comp28030_c0_seq1 232bp	Bomo_Chr20	PREDICTED:_prolow-density_lipoprotein_receptor-related_protein_1-like_[Bombyx_mori]	GO:0005509 F calcium ion binding GO:0005905 C clathrin-coated pit GO:0006897 P endocytosis GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0046872 F metal ion binding
3077	O_BomoEE12770_complete:A_BomoEE_comp66299_c2_seq1 105bp	Bomo_Chr12
3078	O_BomoEE12771_complete:A_BomoEE_comp66299_c2_seq1 105bp	Bomo_Chr12
3079	O_BomoEE12772_complete:A_BomoEE_comp66299_c2_seq1 103bp	Bomo_Chr12
3080	O_BomoEE12773_complete:A_BomoEE_comp66299_c2_seq1 100bp	Bomo_Chr12
3081	O_BomoEE12774_complete:A_BomoEE_comp66304_c0_seq1 587bp	Bomo_Chr3	PREDICTED:_uncharacterized_protein_LOC101743924_isoform_X1_[Bombyx_mori]	GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0007507 P heart development GO:0008270 F zinc ion binding GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling GO:0045860 P positive regulation of protein kinase activity GO:0046872 F metal ion binding GO:0070530 F K63-linked polyubiquitin modification-dependent protein binding
3082	O_BomoEE12775_5prime_partial:A_BomoEE_comp66312_c0_seq1 160bp	Bomo_Chr16	PREDICTED:_solute_carrier_family_22_member_3-like_[Bombyx_mori]
3083	O_BomoEE12776_5prime_partial:A_BomoEE_comp66312_c0_seq2 141bp	Bomo_Chr16	PREDICTED:_solute_carrier_family_22_member_3-like_[Bombyx_mori]
3084	O_BomoEE12777_5prime_partial:A_BomoEE_comp66312_c0_seq3 329bp	Bomo_Chr16	PREDICTED:_solute_carrier_family_22_member_3-like_[Bombyx_mori]	GO:0006810 P transport GO:0006811 P ion transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0022857 F transmembrane transporter activity GO:0055085 P transmembrane transport
3085	O_BomoEE12778_complete:A_BomoEE_comp66312_c0_seq3 107bp	Bomo_Chr16
3086	O_BomoEE12779_complete:A_BomoEE_comp66314_c0_seq1 209bp	Bomo_Chr14	PREDICTED:_uncharacterized_protein_LOC105842564_[Bombyx_mori]
3087	O_BomoEE1277_5prime_partial:A_BomoEE_comp28030_c0_seq1 200bp	Bomo_Chr20
3088	O_BomoEE12780_complete:A_BomoEE_comp66314_c0_seq1 204bp	Bomo_Chr14	PREDICTED:_uncharacterized_protein_LOC105386002_isoform_X1_[Plutella_xylostella]
3089	O_BomoEE12781_complete:A_BomoEE_comp66314_c0_seq1 106bp	Bomo_Chr14
3090	O_BomoEE12782_3prime_partial:A_BomoEE_comp66317_c0_seq1 587bp	Bomo_Chr9	PREDICTED:_centaurin-gamma-1A_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003924 F GTPase activity GO:0005096 F GTPase activator activity GO:0005525 F GTP binding GO:0005622 C intracellular anatomical structure GO:0007165 P signal transduction GO:0007264 P small GTPase mediated signal transduction GO:0015031 P protein transport GO:0016020 C membrane GO:0043087 P regulation of GTPase activity GO:0043547 P positive regulation of GTPase activity GO:0046872 F metal ion binding GO:0072375 P medium-term memory