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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2911 O_BomoEE12620_complete:A_BomoEE_comp66146_c0_seq1
122bp
2912 O_BomoEE12621_complete:A_BomoEE_comp66146_c0_seq1
101bp
2913 O_BomoEE12622_internal:A_BomoEE_comp66153_c0_seq1
113bp
 PREDICTED:_fat-like_cadherin-related_tumor_suppressor_homolog_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007293 P germarium-derived egg chamber formation
GO:0007295 P growth of a germarium-derived egg chamber
GO:0007424 P open tracheal system development
GO:0007431 P salivary gland development
GO:0007440 P foregut morphogenesis
GO:0007442 P hindgut morphogenesis
GO:0009925 C basal plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0030950 P establishment or maintenance of actin cytoskeleton polarity
GO:0042247 P establishment of planar polarity of follicular epithelium
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045089 P positive regulation of innate immune response
GO:0045571 P negative regulation of imaginal disc growth
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0050839 F cell adhesion molecule binding
GO:0060429 P epithelium development
2914 O_BomoEE12623_internal:A_BomoEE_comp66153_c0_seq1
113bp
2915 O_BomoEE12624_internal:A_BomoEE_comp66153_c0_seq1
113bp
2916 O_BomoEE12625_internal:A_BomoEE_comp66153_c0_seq2
268bp
 hypothetical_protein_KGM_21712_[Danaus_plexippus]
GO:0000904 P cell morphogenesis involved in differentiation
GO:0001764 P neuron migration
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007275 P multicellular organism development
GO:0010842 P retina layer formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030425 C dendrite
GO:2000171 P negative regulation of dendrite development
2917 O_BomoEE12626_internal:A_BomoEE_comp66153_c0_seq2
268bp
2918 O_BomoEE12627_internal:A_BomoEE_comp66153_c0_seq2
267bp
2919 O_BomoEE12628_complete:A_BomoEE_comp66159_c0_seq1
634bp
 fused_lobes_[Bombyx_mori]
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004563 F beta-N-acetylhexosaminidase activity
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005975 P carbohydrate metabolic process
GO:0006032 P chitin catabolic process
GO:0006491 P N-glycan processing
GO:0006517 P protein deglycosylation
GO:0007275 P multicellular organism development
GO:0007420 P brain development
GO:0008152 P metabolic process
GO:0016063 P rhodopsin biosynthetic process
GO:0016231 F beta-N-acetylglucosaminidase activity
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0032428 F beta-N-acetylgalactosaminidase activity
2920 O_BomoEE12629_complete:A_BomoEE_comp66159_c0_seq2
634bp
 fused_lobes_[Bombyx_mori]
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004563 F beta-N-acetylhexosaminidase activity
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005975 P carbohydrate metabolic process
GO:0006032 P chitin catabolic process
GO:0006491 P N-glycan processing
GO:0006517 P protein deglycosylation
GO:0007275 P multicellular organism development
GO:0007420 P brain development
GO:0008152 P metabolic process
GO:0016063 P rhodopsin biosynthetic process
GO:0016231 F beta-N-acetylglucosaminidase activity
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0032428 F beta-N-acetylgalactosaminidase activity
2921 O_BomoEE1262_complete:A_BomoEE_comp27838_c0_seq1
187bp
 PREDICTED:_dystonin-like_[Bombyx_mori]
2922 O_BomoEE12630_complete:A_BomoEE_comp66161_c0_seq1
312bp
 PREDICTED:_uncharacterized_protein_LOC101735450_isoform_X1_[Bombyx_mori]
2923 O_BomoEE12631_complete:A_BomoEE_comp66162_c0_seq1
403bp
 PREDICTED:_dual_specificity_protein_phosphatase_12-like_[Papilio_machaon]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0019900 F kinase binding
GO:0033133 P positive regulation of glucokinase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0046872 F metal ion binding
2924 O_BomoEE12632_complete:A_BomoEE_comp66162_c0_seq1
100bp
2925 O_BomoEE12633_complete:A_BomoEE_comp66162_c0_seq2
400bp
 PREDICTED:_dual_specificity_protein_phosphatase_12-like_[Papilio_machaon]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0019900 F kinase binding
GO:0033133 P positive regulation of glucokinase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0046872 F metal ion binding
2926 O_BomoEE12634_complete:A_BomoEE_comp66162_c0_seq2
100bp
2927 O_BomoEE12635_5prime_partial:A_BomoEE_comp66164_c0_seq1
499bp
 PREDICTED:_Golgi_resident_protein_GCP60_[Papilio_machaon]
GO:0006810 P transport
GO:0016021 C integral component of membrane
2928 O_BomoEE12636_complete:A_BomoEE_comp66169_c0_seq1
580bp
 PREDICTED:_endoplasmic_reticulum_mannosyl-oligosaccharide_1,2-alpha-mannosidase_[Amyelois_transitella]
GO:0004571 F mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006491 P N-glycan processing
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036508 P protein alpha-1,2-demannosylation
GO:0036509 P trimming of terminal mannose on B branch
GO:0044322 C endoplasmic reticulum quality control compartment
GO:0046872 F metal ion binding
GO:0097466 P ubiquitin-dependent glycoprotein ERAD pathway
GO:1903561 C extracellular vesicle
GO:1904380 P endoplasmic reticulum mannose trimming
GO:1904382 P mannose trimming involved in glycoprotein ERAD pathway
2929 O_BomoEE12637_3prime_partial:A_BomoEE_comp66170_c0_seq3
355bp
 PREDICTED:_transcription_factor_EB-like_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001892 P embryonic placenta development
GO:0002250 P adaptive immune response
GO:0002376 P immune system process
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006914 P autophagy
GO:0006959 P humoral immune response
GO:0007040 P lysosome organization
GO:0010508 P positive regulation of autophagy
GO:0044212 F transcription cis-regulatory region binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
2930 O_BomoEE12638_5prime_partial:A_BomoEE_comp66170_c0_seq3
135bp
2931 O_BomoEE12639_complete:A_BomoEE_comp66170_c0_seq3
101bp
2932 O_BomoEE1263_5prime_partial:A_BomoEE_comp27838_c0_seq1
112bp
2933 O_BomoEE12640_3prime_partial:A_BomoEE_comp66170_c0_seq4
320bp
 PREDICTED:_transcription_factor_EB-like_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001892 P embryonic placenta development
GO:0002250 P adaptive immune response
GO:0002376 P immune system process
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006914 P autophagy
GO:0006959 P humoral immune response
GO:0007040 P lysosome organization
GO:0010508 P positive regulation of autophagy
GO:0044212 F transcription cis-regulatory region binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
2934 O_BomoEE12641_5prime_partial:A_BomoEE_comp66170_c0_seq4
135bp
2935 O_BomoEE12642_complete:A_BomoEE_comp66170_c0_seq4
101bp
2936 O_BomoEE12643_3prime_partial:A_BomoEE_comp66170_c0_seq5
320bp
 PREDICTED:_transcription_factor_EB-like_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001892 P embryonic placenta development
GO:0002250 P adaptive immune response
GO:0002376 P immune system process
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006914 P autophagy
GO:0006959 P humoral immune response
GO:0007040 P lysosome organization
GO:0010508 P positive regulation of autophagy
GO:0044212 F transcription cis-regulatory region binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
2937 O_BomoEE12644_5prime_partial:A_BomoEE_comp66170_c0_seq5
135bp
2938 O_BomoEE12645_complete:A_BomoEE_comp66170_c0_seq5
101bp
2939 O_BomoEE12646_complete:A_BomoEE_comp66173_c0_seq2
422bp
 PREDICTED:_rRNA_methyltransferase_3,_mitochondrial_[Amyelois_transitella]
GO:0001510 P RNA methylation
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
GO:0008168 F methyltransferase activity
GO:0008173 F RNA methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0044822 F RNA binding
2940 O_BomoEE12647_5prime_partial:A_BomoEE_comp66177_c0_seq1
144bp
 PREDICTED:_integrator_complex_subunit_7_[Bombyx_mori]
GO:0000077 P DNA damage checkpoint signaling
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006974 P cellular response to DNA damage stimulus
GO:0016180 P snRNA processing
GO:0032039 C integrator complex
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0071479 P cellular response to ionizing radiation
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