Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
2611	O_BomoEE12350_complete:A_BomoEE_comp65889_c0_seq3 172bp	Bomo_Chr17
2612	O_BomoEE12351_5prime_partial:A_BomoEE_comp65889_c0_seq4 493bp	Bomo_Chr17	PREDICTED:_alkyldihydroxyacetonephosphate_synthase_[Amyelois_transitella]	GO:0003824 F catalytic activity GO:0005777 C peroxisome GO:0006629 P lipid metabolic process GO:0008609 F alkylglycerone-phosphate synthase activity GO:0008610 P lipid biosynthetic process GO:0008611 P ether lipid biosynthetic process GO:0016491 F oxidoreductase activity GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors GO:0016740 F transferase activity GO:0050660 F flavin adenine dinucleotide binding GO:0055114 P obsolete oxidation-reduction process GO:0071949 F FAD binding
2613	O_BomoEE12352_complete:A_BomoEE_comp65889_c0_seq4 153bp	Bomo_Chr17
2614	O_BomoEE12353_5prime_partial:A_BomoEE_comp65891_c1_seq1 102bp	Bomo_Chr20
2615	O_BomoEE12354_complete:A_BomoEE_comp65891_c3_seq1 163bp	Bomo_Scaf395
2616	O_BomoEE12355_5prime_partial:A_BomoEE_comp65891_c3_seq1 139bp	Bomo_Scaf395	PREDICTED:_probable_nucleoporin_Nup54_isoform_X2_[Bombyx_mori]	GO:0005487 F structural constituent of nuclear pore GO:0005634 C nucleus GO:0005643 C nuclear pore GO:0006605 P protein targeting GO:0006606 P protein import into nucleus GO:0006607 P NLS-bearing protein import into nucleus GO:0006810 P transport GO:0006913 P nucleocytoplasmic transport GO:0006999 P nuclear pore organization GO:0015031 P protein transport GO:0017056 F structural constituent of nuclear pore GO:0036228 P protein localization to nuclear inner membrane GO:0044613 C nuclear pore central transport channel GO:0051028 P mRNA transport
2617	O_BomoEE12356_complete:A_BomoEE_comp65897_c0_seq1 105bp	Bomo_Chr21
2618	O_BomoEE12357_complete:A_BomoEE_comp65899_c0_seq1 514bp	Bomo_Chr23	PREDICTED:_transmembrane_protein_39A_[Amyelois_transitella]	GO:0002230 P positive regulation of defense response to virus by host GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization GO:0098792 P xenophagy
2619	O_BomoEE12358_complete:A_BomoEE_comp65899_c0_seq1 101bp	Bomo_Chr23
2620	O_BomoEE12359_complete:A_BomoEE_comp65900_c0_seq1 232bp	Bomo_Chr2	PREDICTED:_uncharacterized_protein_LOC106138707_isoform_X1_[Amyelois_transitella]	GO:0004842 F ubiquitin-protein transferase activity GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006511 P ubiquitin-dependent protein catabolic process GO:0007275 P multicellular organism development GO:0007423 P sensory organ development GO:0007601 P visual perception GO:0008270 F zinc ion binding GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0045676 P regulation of R7 cell differentiation GO:0046872 F metal ion binding GO:0050896 P response to stimulus
2621	O_BomoEE1235_5prime_partial:A_BomoEE_comp27435_c0_seq1 114bp	Bomo_Chr11
2622	O_BomoEE12360_complete:A_BomoEE_comp65900_c0_seq2 164bp	Bomo_Chr2	putative_seven_in_absentia_[Danaus_plexippus]
2623	O_BomoEE12361_complete:A_BomoEE_comp65900_c0_seq3 270bp	Bomo_Chr1	putative_seven_in_absentia_[Danaus_plexippus]
2624	O_BomoEE12362_complete:A_BomoEE_comp65900_c0_seq3 103bp	Bomo_Chr1	PREDICTED:_uncharacterized_protein_LOC106712294_[Papilio_machaon]
2625	O_BomoEE12363_complete:A_BomoEE_comp65900_c0_seq4 414bp	Bomo_Chr1	putative_seven_in_absentia_[Danaus_plexippus]
2626	O_BomoEE12364_complete:A_BomoEE_comp65900_c0_seq5 270bp	Bomo_Chr1	putative_seven_in_absentia_[Danaus_plexippus]
2627	O_BomoEE12365_complete:A_BomoEE_comp65900_c0_seq5 171bp	Bomo_Chr1	PREDICTED:_uncharacterized_protein_LOC106712294_[Papilio_machaon]	GO:0004842 F ubiquitin-protein transferase activity GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006511 P ubiquitin-dependent protein catabolic process GO:0007275 P multicellular organism development GO:0007423 P sensory organ development GO:0007601 P visual perception GO:0008270 F zinc ion binding GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0045676 P regulation of R7 cell differentiation GO:0046872 F metal ion binding GO:0050896 P response to stimulus
2628	O_BomoEE12366_complete:A_BomoEE_comp65900_c0_seq6 482bp	Bomo_Chr1	putative_seven_in_absentia_[Danaus_plexippus]	GO:0004842 F ubiquitin-protein transferase activity GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006511 P ubiquitin-dependent protein catabolic process GO:0007275 P multicellular organism development GO:0007423 P sensory organ development GO:0007601 P visual perception GO:0008270 F zinc ion binding GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0045676 P regulation of R7 cell differentiation GO:0046872 F metal ion binding GO:0050896 P response to stimulus
2629	O_BomoEE12367_internal:A_BomoEE_comp65903_c0_seq1 764bp	Bomo_Chr10	PREDICTED:_hemocytin_[Amyelois_transitella]	GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0007155 P cell adhesion GO:0010466 P negative regulation of peptidase activity GO:0030414 F peptidase inhibitor activity
2630	O_BomoEE12368_complete:A_BomoEE_comp65903_c0_seq1 117bp	Bomo_Chr10
2631	O_BomoEE12369_5prime_partial:A_BomoEE_comp65903_c0_seq1 113bp	Bomo_Chr10
2632	O_BomoEE1236_internal:A_BomoEE_comp27449_c0_seq1 226bp	Bomo_Chr17	PREDICTED:_protein_tweety-like_[Bombyx_mori]	GO:0005254 F chloride channel activity GO:0005886 C plasma membrane GO:0006810 P transport GO:0006811 P ion transport GO:0006821 P chloride transport GO:0008150 P biological_process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0034707 C chloride channel complex GO:1902476 P chloride transmembrane transport
2633	O_BomoEE12370_complete:A_BomoEE_comp65903_c0_seq1 103bp	Bomo_Chr10
2634	O_BomoEE12371_complete:A_BomoEE_comp65904_c1_seq1 336bp	Bomo_Chr8	PREDICTED:_UDP-xylose_and_UDP-N-acetylglucosamine_transporter_[Papilio_machaon]	GO:0005456 F CMP-N-acetylneuraminate transmembrane transporter activity GO:0005457 F GDP-fucose transmembrane transporter activity GO:0005458 F GDP-mannose transmembrane transporter activity GO:0005460 F UDP-glucose transmembrane transporter activity GO:0005461 F UDP-glucuronic acid transmembrane transporter activity GO:0005462 F UDP-N-acetylglucosamine transmembrane transporter activity GO:0005464 F UDP-xylose transmembrane transporter activity GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0005794 C Golgi apparatus GO:0006810 P transport GO:0008643 P carbohydrate transport GO:0015012 P heparan sulfate proteoglycan biosynthetic process GO:0015782 P CMP-N-acetylneuraminate transmembrane transport GO:0015783 P GDP-fucose transmembrane transport GO:0015784 P GDP-mannose transmembrane transport GO:0015786 P UDP-glucose transmembrane transport GO:0015787 P UDP-glucuronic acid transmembrane transport GO:0015788 P UDP-N-acetylglucosamine transmembrane transport GO:0015790 P UDP-xylose transmembrane transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0030173 C integral component of Golgi membrane GO:0030176 C integral component of endoplasmic reticulum membrane GO:0036066 P protein O-linked fucosylation GO:0036084 P GDP-fucose import into endoplasmic reticulum lumen GO:0055085 P transmembrane transport GO:1990569 P UDP-N-acetylglucosamine transmembrane transport
2635	O_BomoEE12372_complete:A_BomoEE_comp65907_c0_seq1 962bp	Bomo_Chr8	cyclin_dependent_kinase_12_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000228 C nuclear chromosome GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0004693 F cyclin-dependent protein serine/threonine kinase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005694 C chromosome GO:0005700 C polytene chromosome GO:0005703 C polytene chromosome puff GO:0006468 P protein phosphorylation GO:0006909 P phagocytosis GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0019908 C nuclear cyclin-dependent protein kinase holoenzyme complex GO:0022008 P neurogenesis GO:0030332 F cyclin binding GO:0040018 P positive regulation of multicellular organism growth GO:0046579 P positive regulation of Ras protein signal transduction GO:0051726 P regulation of cell cycle GO:0070374 P positive regulation of ERK1 and ERK2 cascade GO:0070816 P phosphorylation of RNA polymerase II C-terminal domain GO:0090277 P positive regulation of peptide hormone secretion
2636	O_BomoEE12373_complete:A_BomoEE_comp65907_c0_seq2 1050bp	Bomo_Chr8	PREDICTED:_cyclin_dependent_kinase_12_isoform_X1_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000228 C nuclear chromosome GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0004693 F cyclin-dependent protein serine/threonine kinase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005694 C chromosome GO:0005700 C polytene chromosome GO:0005703 C polytene chromosome puff GO:0006468 P protein phosphorylation GO:0006909 P phagocytosis GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0019908 C nuclear cyclin-dependent protein kinase holoenzyme complex GO:0022008 P neurogenesis GO:0030332 F cyclin binding GO:0040018 P positive regulation of multicellular organism growth GO:0046579 P positive regulation of Ras protein signal transduction GO:0051726 P regulation of cell cycle GO:0070374 P positive regulation of ERK1 and ERK2 cascade GO:0070816 P phosphorylation of RNA polymerase II C-terminal domain GO:0090277 P positive regulation of peptide hormone secretion
2637	O_BomoEE12374_internal:A_BomoEE_comp65909_c0_seq1 521bp	Bomo_Chr7	PREDICTED:_uncharacterized_protein_LOC101736185,_partial_[Bombyx_mori]	GO:0003779 F actin binding GO:0005198 F structural molecule activity GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005856 C cytoskeleton GO:0005886 C plasma membrane GO:0005938 C cell cortex GO:0007274 P neuromuscular synaptic transmission GO:0007474 P imaginal disc-derived wing vein specification GO:0008092 F cytoskeletal protein binding GO:0008270 F zinc ion binding GO:0008307 F structural constituent of muscle GO:0008586 P imaginal disc-derived wing vein morphogenesis GO:0016010 C dystrophin-associated glycoprotein complex GO:0016020 C membrane GO:0030010 P establishment of cell polarity GO:0042383 C sarcolemma GO:0045202 C synapse GO:0046716 P muscle cell cellular homeostasis GO:0046872 F metal ion binding GO:0046928 P regulation of neurotransmitter secretion GO:0048172 P regulation of short-term neuronal synaptic plasticity GO:0050699 F WW domain binding
2638	O_BomoEE12375_complete:A_BomoEE_comp65909_c0_seq1 297bp	Bomo_Chr7
2639	O_BomoEE12376_5prime_partial:A_BomoEE_comp65909_c0_seq1 131bp	Bomo_Chr7
2640	O_BomoEE12377_5prime_partial:A_BomoEE_comp65909_c0_seq1 110bp	Bomo_Chr7