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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2431 O_BomoEE12189_complete:A_BomoEE_comp65734_c0_seq2
993bp
 PREDICTED:_valine--tRNA_ligase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004832 F valine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006438 P valyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
2432 O_BomoEE1218_5prime_partial:A_BomoEE_comp27232_c0_seq1
207bp
 PREDICTED:_protein_kibra_isoform_X1_[Bombyx_mori]
2433 O_BomoEE12190_3prime_partial:A_BomoEE_comp65734_c0_seq2
376bp
 PREDICTED:_protein_FAM91A1_[Papilio_machaon]
GO:0005575 C cellular_component
2434 O_BomoEE12191_complete:A_BomoEE_comp65734_c0_seq2
157bp
2435 O_BomoEE12192_complete:A_BomoEE_comp65734_c0_seq2
110bp
2436 O_BomoEE12193_3prime_partial:A_BomoEE_comp65734_c0_seq3
490bp
 PREDICTED:_protein_FAM91A1_[Papilio_machaon]
GO:0005575 C cellular_component
2437 O_BomoEE12194_complete:A_BomoEE_comp65734_c0_seq3
287bp
 PREDICTED:_valine--tRNA_ligase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004832 F valine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006438 P valyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0007275 P multicellular organism development
GO:0009507 C chloroplast
GO:0009793 P embryo development ending in seed dormancy
GO:0016874 F ligase activity
2438 O_BomoEE12195_complete:A_BomoEE_comp65734_c0_seq3
157bp
2439 O_BomoEE12196_3prime_partial:A_BomoEE_comp65734_c0_seq4
376bp
 PREDICTED:_protein_FAM91A1_[Papilio_machaon]
GO:0005575 C cellular_component
2440 O_BomoEE12197_complete:A_BomoEE_comp65734_c0_seq4
287bp
 PREDICTED:_valine--tRNA_ligase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004832 F valine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006438 P valyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0007275 P multicellular organism development
GO:0009507 C chloroplast
GO:0009793 P embryo development ending in seed dormancy
GO:0016874 F ligase activity
2441 O_BomoEE12198_complete:A_BomoEE_comp65734_c0_seq4
157bp
2442 O_BomoEE12199_complete:A_BomoEE_comp65734_c0_seq5
613bp
 PREDICTED:_valine--tRNA_ligase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004832 F valine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006438 P valyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
2443 O_BomoEE1219_internal:A_BomoEE_comp27232_c0_seq2
207bp
 PREDICTED:_protein_kibra_isoform_X1_[Bombyx_mori]
2444 O_BomoEE121_5prime_partial:A_BomoEE_comp2088_c0_seq2
282bp
 PREDICTED:_low-density_lipoprotein_receptor-related_protein_4-like_[Bombyx_mori]
GO:0001822 P kidney development
GO:0001932 P regulation of protein phosphorylation
GO:0001942 P hair follicle development
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006897 P endocytosis
GO:0007275 P multicellular organism development
GO:0008104 P protein localization
GO:0009953 P dorsal/ventral pattern formation
GO:0009954 P proximal/distal pattern formation
GO:0009986 C cell surface
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016600 C flotillin complex
GO:0030154 P cell differentiation
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0030279 P negative regulation of ossification
GO:0030326 P embryonic limb morphogenesis
GO:0030425 C dendrite
GO:0030509 P BMP signaling pathway
GO:0030971 F receptor tyrosine kinase binding
GO:0031594 C neuromuscular junction
GO:0034185 F apolipoprotein binding
GO:0042475 P odontogenesis of dentin-containing tooth
GO:0042733 P embryonic digit morphogenesis
GO:0042803 F protein homodimerization activity
GO:0043025 C neuronal cell body
GO:0043113 P receptor clustering
GO:0048513 P animal organ development
GO:0048813 P dendrite morphogenesis
GO:0048856 P anatomical structure development
GO:0050731 P positive regulation of peptidyl-tyrosine phosphorylation
GO:0050771 P negative regulation of axonogenesis
GO:0050808 P synapse organization
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0051290 P protein heterotetramerization
GO:0060173 P limb development
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0071340 P skeletal muscle acetylcholine-gated channel clustering
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0097060 C synaptic membrane
GO:0097104 P postsynaptic membrane assembly
GO:0097105 P presynaptic membrane assembly
GO:0097110 F scaffold protein binding
GO:1901631 P positive regulation of presynaptic membrane organization
GO:1904395 P positive regulation of skeletal muscle acetylcholine-gated channel clustering
2445 O_BomoEE12200_3prime_partial:A_BomoEE_comp65734_c0_seq5
376bp
 PREDICTED:_protein_FAM91A1_[Papilio_machaon]
GO:0005575 C cellular_component
2446 O_BomoEE12201_complete:A_BomoEE_comp65734_c0_seq5
287bp
 PREDICTED:_valine--tRNA_ligase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004832 F valine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006438 P valyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0007275 P multicellular organism development
GO:0009507 C chloroplast
GO:0009793 P embryo development ending in seed dormancy
GO:0016874 F ligase activity
2447 O_BomoEE12202_complete:A_BomoEE_comp65734_c0_seq5
157bp
2448 O_BomoEE12203_complete:A_BomoEE_comp65734_c0_seq6
613bp
 PREDICTED:_valine--tRNA_ligase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004832 F valine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006438 P valyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
2449 O_BomoEE12204_3prime_partial:A_BomoEE_comp65734_c0_seq6
490bp
 PREDICTED:_protein_FAM91A1_[Papilio_machaon]
GO:0005575 C cellular_component
2450 O_BomoEE12205_complete:A_BomoEE_comp65734_c0_seq6
287bp
 PREDICTED:_valine--tRNA_ligase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004832 F valine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006438 P valyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0007275 P multicellular organism development
GO:0009507 C chloroplast
GO:0009793 P embryo development ending in seed dormancy
GO:0016874 F ligase activity
2451 O_BomoEE12206_complete:A_BomoEE_comp65734_c0_seq6
157bp
2452 O_BomoEE12207_5prime_partial:A_BomoEE_comp65736_c0_seq1
214bp
 hypothetical_protein_KGM_02633_[Danaus_plexippus]
2453 O_BomoEE12208_complete:A_BomoEE_comp65736_c0_seq1
138bp
2454 O_BomoEE12209_5prime_partial:A_BomoEE_comp65736_c0_seq2
148bp
 PREDICTED:_cysteine_and_glycine-rich_protein_3-like_[Papilio_machaon]
2455 O_BomoEE1220_5prime_partial:A_BomoEE_comp27240_c0_seq1
398bp
 clip_domain_serine_protease_4_precursor_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0010952 P positive regulation of peptidase activity
GO:0016504 F peptidase activator activity
GO:0016787 F hydrolase activity
2456 O_BomoEE12210_complete:A_BomoEE_comp65736_c0_seq2
147bp
2457 O_BomoEE12211_5prime_partial:A_BomoEE_comp65736_c0_seq3
245bp
 hypothetical_protein_KGM_02633_[Danaus_plexippus]
2458 O_BomoEE12212_complete:A_BomoEE_comp65736_c0_seq3
138bp
2459 O_BomoEE12213_complete:A_BomoEE_comp65736_c0_seq4
147bp
2460 O_BomoEE12214_5prime_partial:A_BomoEE_comp65736_c0_seq4
117bp
 PREDICTED:_cysteine_and_glycine-rich_protein_3-like_[Papilio_machaon]
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