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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2161 O_BomoEE11946_5prime_partial:A_BomoEE_comp65551_c0_seq1
108bp
2162 O_BomoEE11947_complete:A_BomoEE_comp65551_c0_seq1
102bp
2163 O_BomoEE11948_5prime_partial:A_BomoEE_comp65551_c0_seq2
307bp
2164 O_BomoEE11949_3prime_partial:A_BomoEE_comp65551_c0_seq2
237bp
 PREDICTED:_BTB/POZ_domain-containing_protein_7-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0060693 P regulation of branching involved in salivary gland morphogenesis
2165 O_BomoEE1194_5prime_partial:A_BomoEE_comp26530_c0_seq2
132bp
 PREDICTED:_uncharacterized_protein_LOC101742063_isoform_X1_[Bombyx_mori]
2166 O_BomoEE11950_complete:A_BomoEE_comp65557_c0_seq1
1548bp
 PREDICTED:_DNA_polymerase_epsilon_catalytic_subunit_A_[Amyelois_transitella]
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0000731 P DNA synthesis involved in DNA repair
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005886 C plasma membrane
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006287 P base-excision repair, gap-filling
GO:0006297 P nucleotide-excision repair, DNA gap filling
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0008408 F 3'-5' exonuclease activity
GO:0008622 C epsilon DNA polymerase complex
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2167 O_BomoEE11951_complete:A_BomoEE_comp65557_c0_seq1
104bp
2168 O_BomoEE11952_3prime_partial:A_BomoEE_comp65557_c0_seq2
1585bp
 PREDICTED:_DNA_polymerase_epsilon_catalytic_subunit_A_[Amyelois_transitella]
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0000731 P DNA synthesis involved in DNA repair
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005886 C plasma membrane
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006287 P base-excision repair, gap-filling
GO:0006297 P nucleotide-excision repair, DNA gap filling
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0008408 F 3'-5' exonuclease activity
GO:0008622 C epsilon DNA polymerase complex
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2169 O_BomoEE11953_complete:A_BomoEE_comp65557_c0_seq2
104bp
2170 O_BomoEE11954_5prime_partial:A_BomoEE_comp65557_c0_seq2
103bp
2171 O_BomoEE11955_complete:A_BomoEE_comp65558_c0_seq2
131bp
 PREDICTED:_leptin_receptor_gene-related_protein_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0008150 P biological_process
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2172 O_BomoEE11956_3prime_partial:A_BomoEE_comp65561_c0_seq2
347bp
 PREDICTED:_uncharacterized_protein_LOC106142392_isoform_X1_[Amyelois_transitella]
2173 O_BomoEE11957_complete:A_BomoEE_comp65563_c1_seq1
518bp
 PREDICTED:_uncharacterized_protein_LOC106136342_isoform_X1_[Amyelois_transitella]
2174 O_BomoEE11958_complete:A_BomoEE_comp65565_c0_seq1
236bp
2175 O_BomoEE11959_complete:A_BomoEE_comp65565_c0_seq1
187bp
 PREDICTED:_galectin-5-like_[Bombyx_mori]
GO:0001819 P positive regulation of cytokine production
GO:0002376 P immune system process
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006935 P chemotaxis
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007565 P female pregnancy
GO:0010628 P positive regulation of gene expression
GO:0010629 P negative regulation of gene expression
GO:0010819 P regulation of T cell chemotaxis
GO:0010862 P positive regulation of pathway-restricted SMAD protein phosphorylation
GO:0016936 F galactoside binding
GO:0019899 F enzyme binding
GO:0030246 F carbohydrate binding
GO:0032496 P response to lipopolysaccharide
GO:0032689 P negative regulation of interferon-gamma production
GO:0032722 P positive regulation of chemokine production
GO:0032732 P positive regulation of interleukin-1 production
GO:0032760 P positive regulation of tumor necrosis factor production
GO:0032815 P negative regulation of natural killer cell activation
GO:0032823 P regulation of natural killer cell differentiation
GO:0033081 P regulation of T cell differentiation in thymus
GO:0043032 P positive regulation of macrophage activation
GO:0043322 P negative regulation of natural killer cell degranulation
GO:0043539 F protein serine/threonine kinase activator activity
GO:0045089 P positive regulation of innate immune response
GO:0045185 P maintenance of protein location
GO:0045591 P positive regulation of regulatory T cell differentiation
GO:0050728 P negative regulation of inflammatory response
GO:0051353 P positive regulation of oxidoreductase activity
GO:0071902 P positive regulation of protein serine/threonine kinase activity
GO:0098586 P cellular response to virus
GO:1900426 P positive regulation of defense response to bacterium
GO:1902714 P negative regulation of interferon-gamma production
GO:2000316 P regulation of T-helper 17 type immune response
GO:2000406 P positive regulation of T cell migration
GO:2000562 P negative regulation of CD4-positive, alpha-beta T cell proliferation
GO:2000679 P positive regulation of transcription regulatory region DNA binding
GO:2000778 P positive regulation of interleukin-6 production
GO:2001181 P positive regulation of interleukin-10 production
2176 O_BomoEE1195_3prime_partial:A_BomoEE_comp26597_c0_seq1
538bp
 PREDICTED:_netrin-1_isoform_X3_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005622 C intracellular anatomical structure
GO:0006915 P apoptotic process
GO:0006930 P substrate-dependent cell migration, cell extension
GO:0007265 P Ras protein signal transduction
GO:0032488 P Cdc42 protein signal transduction
GO:0045773 P positive regulation of axon extension
GO:2000147 P positive regulation of cell motility
2177 O_BomoEE11960_complete:A_BomoEE_comp65565_c0_seq1
164bp
2178 O_BomoEE11961_complete:A_BomoEE_comp65569_c0_seq1
295bp
 PREDICTED:_kidney_mitochondrial_carrier_protein_1_[Plutella_xylostella]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005740 C mitochondrial envelope
GO:0005743 C mitochondrial inner membrane
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0006810 P transport
GO:0006839 P mitochondrial transport
GO:0009060 P aerobic respiration
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031966 C mitochondrial membrane
2179 O_BomoEE11962_complete:A_BomoEE_comp65571_c0_seq1
1393bp
 PREDICTED:_DNA-directed_RNA_polymerase_III_subunit_RPC1_[Bombyx_mori]
GO:0001056 F RNA polymerase III activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005666 C RNA polymerase III complex
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
2180 O_BomoEE11963_complete:A_BomoEE_comp65571_c0_seq1
431bp
2181 O_BomoEE11964_complete:A_BomoEE_comp65571_c0_seq1
174bp
2182 O_BomoEE11965_complete:A_BomoEE_comp65571_c0_seq1
173bp
2183 O_BomoEE11966_5prime_partial:A_BomoEE_comp65571_c0_seq1
151bp
2184 O_BomoEE11967_complete:A_BomoEE_comp65571_c0_seq1
151bp
2185 O_BomoEE11968_complete:A_BomoEE_comp65571_c0_seq1
131bp
2186 O_BomoEE11969_complete:A_BomoEE_comp65571_c0_seq1
110bp
 hypothetical_protein_L798_06674_[Zootermopsis_nevadensis]
2187 O_BomoEE1196_complete:A_BomoEE_comp26597_c0_seq1
236bp
2188 O_BomoEE11970_complete:A_BomoEE_comp65571_c0_seq1
110bp
2189 O_BomoEE11971_complete:A_BomoEE_comp65575_c0_seq1
254bp
 hypothetical_protein_KGM_15885_[Danaus_plexippus]
2190 O_BomoEE11972_complete:A_BomoEE_comp65575_c0_seq2
254bp
 hypothetical_protein_KGM_15885_[Danaus_plexippus]
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