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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1921 O_BomoEE1172_5prime_partial:A_BomoEE_comp26031_c0_seq1
102bp
1922 O_BomoEE11730_complete:A_BomoEE_comp65355_c0_seq1
213bp
 KDEL_endoplasmic_reticulum_protein_retention_receptor_2_[Bombyx_mori]
GO:0005046 F KDEL sequence binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006621 P protein retention in ER lumen
GO:0006810 P transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0019233 P sensory perception of pain
GO:0030140 C trans-Golgi network transport vesicle
GO:0046923 F ER retention sequence binding
1923 O_BomoEE11731_internal:A_BomoEE_comp65358_c0_seq1
360bp
 TRAS3_[Bombyx_mori]
1924 O_BomoEE11732_5prime_partial:A_BomoEE_comp65358_c0_seq1
123bp
1925 O_BomoEE11733_complete:A_BomoEE_comp65364_c0_seq2
102bp
 PREDICTED:_acylphosphatase-1_[Papilio_machaon]
GO:0003998 F acylphosphatase activity
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
1926 O_BomoEE11734_3prime_partial:A_BomoEE_comp65365_c0_seq1
782bp
 PREDICTED:_uncharacterized_protein_LOC101743028_[Bombyx_mori]
1927 O_BomoEE11735_complete:A_BomoEE_comp65365_c0_seq1
101bp
1928 O_BomoEE11736_3prime_partial:A_BomoEE_comp65365_c0_seq2
782bp
 PREDICTED:_uncharacterized_protein_LOC101743028_[Bombyx_mori]
1929 O_BomoEE11737_complete:A_BomoEE_comp65365_c0_seq2
101bp
1930 O_BomoEE11738_5prime_partial:A_BomoEE_comp65367_c0_seq1
170bp
 PREDICTED:_rab_GTPase-binding_effector_protein_1_isoform_X2_[Bombyx_mori]
1931 O_BomoEE11739_complete:A_BomoEE_comp65367_c0_seq1
128bp
1932 O_BomoEE1173_internal:A_BomoEE_comp26032_c0_seq1
109bp
MULTISPECIES:_hypothetical_protein_[unclassified_Corynebacteriales_(miscellaneous)]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004141 F dethiobiotin synthase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0009102 P biotin biosynthetic process
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
1933 O_BomoEE11740_complete:A_BomoEE_comp65367_c0_seq1
118bp
1934 O_BomoEE11741_5prime_partial:A_BomoEE_comp65367_c0_seq2
147bp
1935 O_BomoEE11742_complete:A_BomoEE_comp65367_c0_seq2
111bp
1936 O_BomoEE11743_5prime_partial:A_BomoEE_comp65367_c0_seq2
104bp
1937 O_BomoEE11744_internal:A_BomoEE_comp65367_c0_seq3
260bp
 PREDICTED:_rab_GTPase-binding_effector_protein_1_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0008083 F growth factor activity
GO:0015031 P protein transport
GO:0016023 C cytoplasmic vesicle
GO:0016192 P vesicle-mediated transport
GO:0030139 C endocytic vesicle
GO:0031410 C cytoplasmic vesicle
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0043547 P positive regulation of GTPase activity
GO:0055037 C recycling endosome
GO:0061025 P membrane fusion
1938 O_BomoEE11745_5prime_partial:A_BomoEE_comp65367_c0_seq3
226bp
1939 O_BomoEE11746_5prime_partial:A_BomoEE_comp65367_c0_seq3
137bp
1940 O_BomoEE11747_complete:A_BomoEE_comp65372_c1_seq2
129bp
 PREDICTED:_uncharacterized_protein_LOC101744800_[Bombyx_mori]
1941 O_BomoEE11748_complete:A_BomoEE_comp65380_c0_seq1
533bp
 PREDICTED:_plexin_domain-containing_protein_2_isoform_X2_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
1942 O_BomoEE11749_complete:A_BomoEE_comp65381_c0_seq1
119bp
 PREDICTED:_transmembrane_protein_136-like_[Papilio_xuthus]
1943 O_BomoEE1174_5prime_partial:A_BomoEE_comp26037_c0_seq1
139bp
1944 O_BomoEE11750_complete:A_BomoEE_comp65382_c0_seq1
306bp
 scaffold_protein_salvador_[Bombyx_mori]
GO:0001942 P hair follicle development
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0030216 P keratinocyte differentiation
GO:0035329 P hippo signaling
GO:0043065 P positive regulation of apoptotic process
GO:0045600 P positive regulation of fat cell differentiation
GO:0046620 P regulation of organ growth
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0050821 P protein stabilization
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0060044 P negative regulation of cardiac muscle cell proliferation
GO:0060412 P ventricular septum morphogenesis
GO:0060487 P lung epithelial cell differentiation
GO:0060575 P intestinal epithelial cell differentiation
GO:2000036 P regulation of stem cell population maintenance
1945 O_BomoEE11751_complete:A_BomoEE_comp65382_c0_seq3
403bp
 scaffold_protein_salvador_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005912 C adherens junction
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0007444 P imaginal disc development
GO:0008285 P negative regulation of cell population proliferation
GO:0010212 P response to ionizing radiation
GO:0032947 F molecular adaptor activity
GO:0035329 P hippo signaling
GO:0040014 P regulation of multicellular organism growth
GO:0042127 P regulation of cell population proliferation
GO:0043065 P positive regulation of apoptotic process
GO:0045464 P R8 cell fate specification
GO:0045570 P regulation of imaginal disc growth
GO:0046621 P negative regulation of organ growth
GO:0046666 P retinal cell programmed cell death
GO:0048814 P regulation of dendrite morphogenesis
GO:0048863 P stem cell differentiation
GO:0072002 P Malpighian tubule development
GO:0072089 P stem cell proliferation
1946 O_BomoEE11752_5prime_partial:A_BomoEE_comp65383_c0_seq2
199bp
 PREDICTED:_uncharacterized_protein_LOC106142919_[Amyelois_transitella]
1947 O_BomoEE11753_5prime_partial:A_BomoEE_comp65383_c0_seq3
137bp
1948 O_BomoEE11754_complete:A_BomoEE_comp65383_c0_seq4
109bp
1949 O_BomoEE11755_complete:A_BomoEE_comp65385_c0_seq1
323bp
 PREDICTED:_transcription_initiation_factor_IIA_subunit_1_[Amyelois_transitella]
GO:0001094 F TFIID-class transcription factor complex binding
GO:0001128 F obsolete RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly
GO:0001129 F obsolete RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly
GO:0005634 C nucleus
GO:0005672 C transcription factor TFIIA complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0017025 F TBP-class protein binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051123 P RNA polymerase II preinitiation complex assembly
1950 O_BomoEE11756_complete:A_BomoEE_comp65385_c0_seq1
121bp
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