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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1831 O_BomoEE11649_complete:A_BomoEE_comp65265_c0_seq4
126bp
1832 O_BomoEE1164_complete:A_BomoEE_comp25852_c0_seq1
105bp
1833 O_BomoEE11650_complete:A_BomoEE_comp65266_c0_seq1
1490bp
 PREDICTED:_uncharacterized_protein_LOC106716793_isoform_X2_[Papilio_machaon]
GO:0000127 C transcription factor TFIIIC complex
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0009303 P rRNA transcription
GO:0009304 P tRNA transcription
GO:0016020 C membrane
GO:0030529 C ribonucleoprotein complex
GO:0042791 P 5S class rRNA transcription by RNA polymerase III
GO:0042797 P tRNA transcription by RNA polymerase III
1834 O_BomoEE11651_5prime_partial:A_BomoEE_comp65268_c0_seq1
114bp
1835 O_BomoEE11652_complete:A_BomoEE_comp65271_c0_seq1
1012bp
 PREDICTED:_centromere_protein_J_[Amyelois_transitella]
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007099 P centriole replication
GO:0007224 P smoothened signaling pathway
GO:0015631 F tubulin binding
GO:0019901 F protein kinase binding
GO:0019904 F protein domain specific binding
GO:0030954 P astral microtubule nucleation
GO:0035058 P non-motile cilium assembly
GO:0036064 C ciliary basal body
GO:0043015 F gamma-tubulin binding
GO:0046427 P positive regulation of receptor signaling pathway via JAK-STAT
GO:0046599 P regulation of centriole replication
GO:0046785 P microtubule polymerization
GO:0051298 P centrosome duplication
GO:0051301 P cell division
GO:0098534 P centriole assembly
GO:1902857 P positive regulation of non-motile cilium assembly
GO:1903087 P mitotic spindle pole body duplication
GO:1903506 P regulation of nucleic acid-templated transcription
GO:1903887 P motile cilium assembly
1836 O_BomoEE11653_5prime_partial:A_BomoEE_comp65271_c0_seq1
344bp
 PREDICTED:_39S_ribosomal_protein_L44,_mitochondrial-like_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005840 C ribosome
GO:0006396 P RNA processing
GO:0016787 F hydrolase activity
GO:0030422 P production of siRNA involved in RNA interference
GO:0030529 C ribonucleoprotein complex
GO:0031053 P primary miRNA processing
GO:0031054 P pre-miRNA processing
GO:0044822 F RNA binding
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
1837 O_BomoEE11654_complete:A_BomoEE_comp65271_c0_seq2
1168bp
 PREDICTED:_centromere_protein_J_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0015631 F tubulin binding
GO:0046599 P regulation of centriole replication
GO:0051301 P cell division
1838 O_BomoEE11655_5prime_partial:A_BomoEE_comp65271_c0_seq2
344bp
 PREDICTED:_39S_ribosomal_protein_L44,_mitochondrial-like_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005840 C ribosome
GO:0006396 P RNA processing
GO:0016787 F hydrolase activity
GO:0030422 P production of siRNA involved in RNA interference
GO:0030529 C ribonucleoprotein complex
GO:0031053 P primary miRNA processing
GO:0031054 P pre-miRNA processing
GO:0044822 F RNA binding
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
1839 O_BomoEE11656_complete:A_BomoEE_comp65279_c0_seq1
564bp
 PREDICTED:_hepatocyte_growth_factor-regulated_tyrosine_kinase_substrate_isoform_X2_[Amyelois_transitella]
GO:0001933 P negative regulation of protein phosphorylation
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005829 C cytosol
GO:0005938 C cell cortex
GO:0006886 P intracellular protein transport
GO:0006887 P exocytosis
GO:0006897 P endocytosis
GO:0007269 P neurotransmitter secretion
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0008021 C synaptic vesicle
GO:0008293 P torso signaling pathway
GO:0008333 P endosome to lysosome transport
GO:0008593 P regulation of Notch signaling pathway
GO:0016050 P vesicle organization
GO:0016079 P synaptic vesicle exocytosis
GO:0016082 P synaptic vesicle priming
GO:0016197 P endosomal transport
GO:0016322 P neuron remodeling
GO:0031398 P positive regulation of protein ubiquitination
GO:0032509 P endosome transport via multivesicular body sorting pathway
GO:0033565 C ESCRT-0 complex
GO:0033619 P membrane protein proteolysis
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0043130 F ubiquitin binding
GO:0045743 P positive regulation of fibroblast growth factor receptor signaling pathway
GO:0045752 P positive regulation of Toll signaling pathway
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051726 P regulation of cell cycle
GO:1990182 P exosomal secretion
GO:2000274 P regulation of epithelial cell migration, open tracheal system
1840 O_BomoEE11657_complete:A_BomoEE_comp65279_c0_seq2
364bp
 PREDICTED:_hepatocyte_growth_factor-regulated_tyrosine_kinase_substrate_isoform_X1_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006622 P protein targeting to lysosome
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0010324 P membrane invagination
GO:0010628 P positive regulation of gene expression
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019904 F protein domain specific binding
GO:0031901 C early endosome membrane
GO:0032585 C multivesicular body membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0043405 P regulation of MAP kinase activity
GO:0046426 P negative regulation of receptor signaling pathway via JAK-STAT
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:0072657 P protein localization to membrane
GO:1903543 P positive regulation of exosomal secretion
1841 O_BomoEE11658_complete:A_BomoEE_comp65279_c0_seq3
955bp
 PREDICTED:_hepatocyte_growth_factor-regulated_tyrosine_kinase_substrate_isoform_X1_[Amyelois_transitella]
GO:0001933 P negative regulation of protein phosphorylation
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005829 C cytosol
GO:0005938 C cell cortex
GO:0006886 P intracellular protein transport
GO:0006887 P exocytosis
GO:0006897 P endocytosis
GO:0007269 P neurotransmitter secretion
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0008021 C synaptic vesicle
GO:0008293 P torso signaling pathway
GO:0008333 P endosome to lysosome transport
GO:0008593 P regulation of Notch signaling pathway
GO:0016050 P vesicle organization
GO:0016079 P synaptic vesicle exocytosis
GO:0016082 P synaptic vesicle priming
GO:0016197 P endosomal transport
GO:0016322 P neuron remodeling
GO:0031398 P positive regulation of protein ubiquitination
GO:0032509 P endosome transport via multivesicular body sorting pathway
GO:0033565 C ESCRT-0 complex
GO:0033619 P membrane protein proteolysis
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0043130 F ubiquitin binding
GO:0045743 P positive regulation of fibroblast growth factor receptor signaling pathway
GO:0045752 P positive regulation of Toll signaling pathway
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051726 P regulation of cell cycle
GO:1990182 P exosomal secretion
GO:2000274 P regulation of epithelial cell migration, open tracheal system
1842 O_BomoEE11659_complete:A_BomoEE_comp65284_c0_seq1
118bp
 PREDICTED:_synaptic_vesicle_2-related_protein-like_[Bombyx_mori]
1843 O_BomoEE1165_internal:A_BomoEE_comp25858_c0_seq1
155bp
 hypothetical_protein_KGM_13510_[Danaus_plexippus]
1844 O_BomoEE11660_complete:A_BomoEE_comp65284_c0_seq2
118bp
 PREDICTED:_synaptic_vesicle_2-related_protein-like_[Bombyx_mori]
1845 O_BomoEE11661_complete:A_BomoEE_comp65291_c0_seq1
117bp
 glutaredoxin_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005773 C vacuole
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0009055 F electron transfer activity
GO:0015035 F protein-disulfide reductase activity
GO:0045454 P cell redox homeostasis
GO:0055114 P obsolete oxidation-reduction process
1846 O_BomoEE11662_internal:A_BomoEE_comp65292_c0_seq1
144bp
 Mitochondrial_ribosomal_protein_S31,_partial_[Operophtera_brumata]
1847 O_BomoEE11663_3prime_partial:A_BomoEE_comp65292_c0_seq2
117bp
 putative_RNA-directed_DNA_polymerase_[Operophtera_brumata]
1848 O_BomoEE11664_complete:A_BomoEE_comp65295_c1_seq1
624bp
 hypothetical_protein_RR46_03448_[Papilio_xuthus]
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006723 P cuticle hydrocarbon biosynthetic process
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0007517 P muscle organ development
GO:0008168 F methyltransferase activity
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0022008 P neurogenesis
GO:0032259 P methylation
GO:0035097 C histone methyltransferase complex
GO:0035098 C ESC/E(Z) complex
GO:0035186 P syncytial blastoderm mitotic cell cycle
GO:0042054 F histone methyltransferase activity
GO:0042810 P pheromone metabolic process
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046974 F histone methyltransferase activity (H3-K9 specific)
GO:0046976 F histone methyltransferase activity (H3-K27 specific)
GO:0048813 P dendrite morphogenesis
GO:0051567 P histone H3-K9 methylation
GO:0070734 P histone H3-K27 methylation
1849 O_BomoEE11665_complete:A_BomoEE_comp65295_c1_seq1
381bp
1850 O_BomoEE11666_complete:A_BomoEE_comp65295_c1_seq1
350bp
 PREDICTED:_S-adenosylmethionine_decarboxylase_proenzyme_[Bombyx_mori]
GO:0004014 F adenosylmethionine decarboxylase activity
GO:0005829 C cytosol
GO:0006557 P S-adenosylmethioninamine biosynthetic process
GO:0006596 P polyamine biosynthetic process
GO:0006597 P spermine biosynthetic process
GO:0008295 P spermidine biosynthetic process
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0050829 P defense response to Gram-negative bacterium
1851 O_BomoEE11667_5prime_partial:A_BomoEE_comp65295_c1_seq1
134bp
1852 O_BomoEE11668_complete:A_BomoEE_comp65295_c1_seq2
733bp
 PREDICTED:_histone-lysine_N-methyltransferase_E(z)_isoform_X1_[Papilio_xuthus]
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006723 P cuticle hydrocarbon biosynthetic process
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0007517 P muscle organ development
GO:0008168 F methyltransferase activity
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0022008 P neurogenesis
GO:0032259 P methylation
GO:0035097 C histone methyltransferase complex
GO:0035098 C ESC/E(Z) complex
GO:0035186 P syncytial blastoderm mitotic cell cycle
GO:0042054 F histone methyltransferase activity
GO:0042810 P pheromone metabolic process
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046974 F histone methyltransferase activity (H3-K9 specific)
GO:0046976 F histone methyltransferase activity (H3-K27 specific)
GO:0048813 P dendrite morphogenesis
GO:0051567 P histone H3-K9 methylation
GO:0070734 P histone H3-K27 methylation
1853 O_BomoEE11669_complete:A_BomoEE_comp65295_c1_seq2
381bp
1854 O_BomoEE1166_3prime_partial:A_BomoEE_comp25876_c0_seq1
200bp
hypothetical_protein_[Bacillus_licheniformis]
1855 O_BomoEE11670_complete:A_BomoEE_comp65295_c1_seq2
350bp
 PREDICTED:_S-adenosylmethionine_decarboxylase_proenzyme_[Bombyx_mori]
GO:0004014 F adenosylmethionine decarboxylase activity
GO:0005829 C cytosol
GO:0006557 P S-adenosylmethioninamine biosynthetic process
GO:0006596 P polyamine biosynthetic process
GO:0006597 P spermine biosynthetic process
GO:0008295 P spermidine biosynthetic process
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0050829 P defense response to Gram-negative bacterium
1856 O_BomoEE11671_5prime_partial:A_BomoEE_comp65295_c1_seq2
134bp
1857 O_BomoEE11672_5prime_partial:A_BomoEE_comp65298_c0_seq1
113bp
 putative_prophage_CP4-6_integrase_[Operophtera_brumata]
1858 O_BomoEE11673_complete:A_BomoEE_comp65298_c0_seq2
103bp
 putative_prophage_CP4-6_integrase_[Operophtera_brumata]
1859 O_BomoEE11674_5prime_partial:A_BomoEE_comp65298_c0_seq3
127bp
 putative_prophage_CP4-6_integrase_[Operophtera_brumata]
1860 O_BomoEE11675_complete:A_BomoEE_comp65302_c0_seq1
387bp
 PREDICTED:_mitochondrial_import_inner_membrane_translocase_subunit_TIM50-C-like_[Amyelois_transitella]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005744 C TIM23 mitochondrial import inner membrane translocase complex
GO:0006470 P protein dephosphorylation
GO:0006810 P transport
GO:0007005 P mitochondrion organization
GO:0007006 P mitochondrial membrane organization
GO:0007067 P mitotic cell cycle
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019233 P sensory perception of pain
GO:0030150 P protein import into mitochondrial matrix
GO:0035335 P peptidyl-tyrosine dephosphorylation
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