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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
181 O_BomoEE10163_complete:A_BomoEE_comp64000_c0_seq1
114bp
 archease_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0008033 P tRNA processing
GO:0022008 P neurogenesis
GO:0046872 F metal ion binding
GO:0048680 P positive regulation of axon regeneration
GO:0072669 C tRNA-splicing ligase complex
182 O_BomoEE10164_complete:A_BomoEE_comp64000_c0_seq2
789bp
 PREDICTED:_probable_aconitate_hydratase,_mitochondrial_[Papilio_xuthus]
GO:0003994 F aconitate hydratase activity
GO:0005506 F iron ion binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006099 P tricarboxylic acid cycle
GO:0006101 P citrate metabolic process
GO:0008152 P metabolic process
GO:0016829 F lyase activity
GO:0043209 C myelin sheath
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
183 O_BomoEE10165_complete:A_BomoEE_comp64000_c0_seq2
123bp
 hypothetical_protein_FF38_06590_[Lucilia_cuprina]
184 O_BomoEE10166_complete:A_BomoEE_comp64000_c0_seq3
160bp
 archease_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0008033 P tRNA processing
GO:0022008 P neurogenesis
GO:0046872 F metal ion binding
GO:0048680 P positive regulation of axon regeneration
GO:0072669 C tRNA-splicing ligase complex
185 O_BomoEE10167_complete:A_BomoEE_comp64001_c0_seq1
656bp
 PREDICTED:_protein-associating_with_the_carboxyl-terminal_domain_of_ezrin_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0042995 C cell projection
186 O_BomoEE10168_complete:A_BomoEE_comp64002_c0_seq1
561bp
 PREDICTED:_transmembrane_protein_8A_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005765 C lysosomal membrane
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
187 O_BomoEE10169_complete:A_BomoEE_comp64002_c0_seq2
589bp
 PREDICTED:_transmembrane_protein_8A_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0040008 P regulation of growth
188 O_BomoEE1016_internal:A_BomoEE_comp22614_c0_seq1
133bp
 PREDICTED:_uncharacterized_protein_LOC101736009_[Bombyx_mori]
189 O_BomoEE10170_complete:A_BomoEE_comp64002_c0_seq3
803bp
 PREDICTED:_transmembrane_protein_8A_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005765 C lysosomal membrane
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
190 O_BomoEE10171_complete:A_BomoEE_comp64002_c0_seq4
347bp
 PREDICTED:_transmembrane_protein_8A_[Bombyx_mori]
191 O_BomoEE10172_complete:A_BomoEE_comp64010_c0_seq2
241bp
 glutathione_S-transferase_omega_3_[Bombyx_mori]
GO:0004364 F glutathione transferase activity
GO:0004734 F pyrimidodiazepine synthase activity
GO:0005737 C cytoplasm
GO:0006726 P eye pigment biosynthetic process
GO:0006728 P pteridine biosynthetic process
GO:0006749 P glutathione metabolic process
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016782 F transferase activity, transferring sulphur-containing groups
GO:0042803 F protein homodimerization activity
GO:0045174 F glutathione dehydrogenase (ascorbate) activity
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
192 O_BomoEE10173_complete:A_BomoEE_comp64015_c0_seq1
523bp
 PREDICTED:_SH2_domain-containing_protein_3C_isoform_X2_[Bombyx_mori]
GO:0005070 F obsolete SH3/SH2 adaptor activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0007254 P JNK cascade
GO:0007264 P small GTPase mediated signal transduction
GO:0009967 P positive regulation of signal transduction
GO:0043547 P positive regulation of GTPase activity
193 O_BomoEE10174_complete:A_BomoEE_comp64015_c0_seq1
103bp
 PREDICTED:_SH2_domain-containing_protein_3C_isoform_X2_[Bombyx_mori]
GO:0005070 F obsolete SH3/SH2 adaptor activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007254 P JNK cascade
GO:0007264 P small GTPase mediated signal transduction
GO:0009967 P positive regulation of signal transduction
GO:0016020 C membrane
GO:0043547 P positive regulation of GTPase activity
194 O_BomoEE10175_complete:A_BomoEE_comp64015_c0_seq2
641bp
 PREDICTED:_SH2_domain-containing_protein_3C_isoform_X2_[Bombyx_mori]
GO:0005070 F obsolete SH3/SH2 adaptor activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0007254 P JNK cascade
GO:0007264 P small GTPase mediated signal transduction
GO:0009967 P positive regulation of signal transduction
GO:0043547 P positive regulation of GTPase activity
195 O_BomoEE10176_complete:A_BomoEE_comp64015_c0_seq3
188bp
 PREDICTED:_SH2_domain-containing_protein_3C_isoform_X2_[Bombyx_mori]
GO:0005070 F obsolete SH3/SH2 adaptor activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007254 P JNK cascade
GO:0007264 P small GTPase mediated signal transduction
GO:0009967 P positive regulation of signal transduction
GO:0016020 C membrane
GO:0043547 P positive regulation of GTPase activity
196 O_BomoEE10177_complete:A_BomoEE_comp64015_c0_seq4
103bp
 PREDICTED:_SH2_domain-containing_protein_3C_isoform_X2_[Bombyx_mori]
GO:0005070 F obsolete SH3/SH2 adaptor activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007254 P JNK cascade
GO:0007264 P small GTPase mediated signal transduction
GO:0009967 P positive regulation of signal transduction
GO:0016020 C membrane
GO:0043547 P positive regulation of GTPase activity
197 O_BomoEE10178_5prime_partial:A_BomoEE_comp64020_c0_seq1
124bp
198 O_BomoEE10179_3prime_partial:A_BomoEE_comp64020_c0_seq2
343bp
 PREDICTED:_nucleolar_MIF4G_domain-containing_protein_1_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0022008 P neurogenesis
GO:0042274 P ribosomal small subunit biogenesis
199 O_BomoEE1017_internal:A_BomoEE_comp22622_c0_seq1
100bp
200 O_BomoEE10180_5prime_partial:A_BomoEE_comp64020_c0_seq2
124bp
201 O_BomoEE10181_complete:A_BomoEE_comp64020_c0_seq3
171bp
 PREDICTED:_nucleolar_MIF4G_domain-containing_protein_1_homolog_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0022008 P neurogenesis
GO:0042274 P ribosomal small subunit biogenesis
GO:0044822 F RNA binding
202 O_BomoEE10182_5prime_partial:A_BomoEE_comp64020_c0_seq3
124bp
203 O_BomoEE10183_3prime_partial:A_BomoEE_comp64020_c0_seq4
343bp
 PREDICTED:_nucleolar_MIF4G_domain-containing_protein_1_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0022008 P neurogenesis
GO:0042274 P ribosomal small subunit biogenesis
204 O_BomoEE10184_5prime_partial:A_BomoEE_comp64020_c0_seq4
124bp
205 O_BomoEE10185_3prime_partial:A_BomoEE_comp64020_c0_seq5
442bp
 PREDICTED:_nucleolar_MIF4G_domain-containing_protein_1_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0022008 P neurogenesis
GO:0042274 P ribosomal small subunit biogenesis
206 O_BomoEE10186_5prime_partial:A_BomoEE_comp64020_c0_seq5
124bp
207 O_BomoEE10187_5prime_partial:A_BomoEE_comp64020_c0_seq6
124bp
208 O_BomoEE10188_complete:A_BomoEE_comp64023_c0_seq1
284bp
 PREDICTED:_serine/threonine-protein_phosphatase_Pgam5,_mitochondrial_isoform_X4_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006470 P protein dephosphorylation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
209 O_BomoEE10189_complete:A_BomoEE_comp64024_c0_seq1
915bp
 AF4/FMR2_family_member_4_[Papilio_xuthus]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007366 P periodic partitioning by pair rule gene
GO:0008361 P regulation of cell size
GO:0032368 P regulation of lipid transport
GO:0042051 P compound eye photoreceptor development
GO:0051493 P regulation of cytoskeleton organization
210 O_BomoEE1018_internal:A_BomoEE_comp22663_c0_seq1
102bp
ABC_transporter_[Propionibacterium_acnes_JCM_18916]
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0006970 P response to osmotic stress
GO:0009409 P response to cold
GO:0015199 F amino-acid betaine transmembrane transporter activity
GO:0015226 F carnitine transmembrane transporter activity
GO:0015879 P carnitine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031460 P glycine betaine transport
GO:1902603 P carnitine transmembrane transport
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