SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/95730
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
14671 O_BomoEE23204_complete:A_BomoEE_comp70608_c0_seq4
127bp
14672 O_BomoEE23205_3prime_partial:A_BomoEE_comp70609_c0_seq1
636bp
 PREDICTED:_probable_peroxisomal_acyl-coenzyme_A_oxidase_1_[Amyelois_transitella]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0006693 P prostaglandin metabolic process
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0019395 P fatty acid oxidation
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0033540 P fatty acid beta-oxidation using acyl-CoA oxidase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
14673 O_BomoEE23206_5prime_partial:A_BomoEE_comp70609_c0_seq1
106bp
14674 O_BomoEE23207_complete:A_BomoEE_comp70609_c0_seq2
394bp
 PREDICTED:_probable_peroxisomal_acyl-coenzyme_A_oxidase_1_[Amyelois_transitella]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0006693 P prostaglandin metabolic process
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0019395 P fatty acid oxidation
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0033540 P fatty acid beta-oxidation using acyl-CoA oxidase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
14675 O_BomoEE23208_5prime_partial:A_BomoEE_comp70609_c0_seq2
106bp
14676 O_BomoEE23209_complete:A_BomoEE_comp70609_c0_seq3
496bp
 PREDICTED:_probable_peroxisomal_acyl-coenzyme_A_oxidase_1_[Amyelois_transitella]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0006693 P prostaglandin metabolic process
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0019395 P fatty acid oxidation
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0033540 P fatty acid beta-oxidation using acyl-CoA oxidase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
14677 O_BomoEE2320_complete:A_BomoEE_comp33883_c1_seq1
149bp
 PREDICTED:_uncharacterized_protein_LOC101743358_[Bombyx_mori]
14678 O_BomoEE23210_5prime_partial:A_BomoEE_comp70609_c0_seq3
106bp
14679 O_BomoEE23211_internal:A_BomoEE_comp70609_c0_seq4
524bp
 PREDICTED:_probable_peroxisomal_acyl-coenzyme_A_oxidase_1_[Papilio_xuthus]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0006693 P prostaglandin metabolic process
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0019395 P fatty acid oxidation
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0033540 P fatty acid beta-oxidation using acyl-CoA oxidase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
14680 O_BomoEE23212_5prime_partial:A_BomoEE_comp70609_c0_seq4
106bp
14681 O_BomoEE23213_3prime_partial:A_BomoEE_comp70609_c0_seq5
534bp
 putative_peroxisomal_acyl-coenzyme_A_oxidase_1_[Papilio_xuthus]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0006693 P prostaglandin metabolic process
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0019395 P fatty acid oxidation
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0033540 P fatty acid beta-oxidation using acyl-CoA oxidase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
14682 O_BomoEE23214_5prime_partial:A_BomoEE_comp70609_c0_seq5
106bp
14683 O_BomoEE23215_5prime_partial:A_BomoEE_comp70609_c0_seq6
384bp
 PREDICTED:_probable_peroxisomal_acyl-coenzyme_A_oxidase_1_[Papilio_machaon]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0006693 P prostaglandin metabolic process
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0019395 P fatty acid oxidation
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0033540 P fatty acid beta-oxidation using acyl-CoA oxidase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
14684 O_BomoEE23216_5prime_partial:A_BomoEE_comp70609_c0_seq6
106bp
14685 O_BomoEE23217_internal:A_BomoEE_comp70609_c0_seq7
159bp
 putative_peroxisomal_acyl-CoA_oxidase,_partial_[Agrotis_segetum]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0006693 P prostaglandin metabolic process
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0019395 P fatty acid oxidation
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0033540 P fatty acid beta-oxidation using acyl-CoA oxidase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
14686 O_BomoEE23218_5prime_partial:A_BomoEE_comp70609_c0_seq7
106bp
14687 O_BomoEE23219_3prime_partial:A_BomoEE_comp70611_c0_seq1
1377bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101745941_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000794 C condensed nuclear chromosome
GO:0001701 P in utero embryonic development
GO:0001756 P somitogenesis
GO:0002020 F protease binding
GO:0003007 P heart morphogenesis
GO:0003300 P cardiac muscle hypertrophy
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005859 C muscle myosin complex
GO:0005865 C striated muscle thin filament
GO:0006468 P protein phosphorylation
GO:0006936 P muscle contraction
GO:0006941 P striated muscle contraction
GO:0007507 P heart development
GO:0007512 P adult heart development
GO:0008307 F structural constituent of muscle
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019899 F enzyme binding
GO:0019901 F protein kinase binding
GO:0021591 P ventricular system development
GO:0030017 C sarcomere
GO:0030018 C Z disc
GO:0030240 P skeletal muscle thin filament assembly
GO:0030241 P skeletal muscle myosin thick filament assembly
GO:0030506 F ankyrin binding
GO:0031430 C M band
GO:0031433 F telethonin binding
GO:0031672 C A band
GO:0031674 C I band
GO:0035995 P detection of muscle stretch
GO:0042802 F identical protein binding
GO:0042805 F actinin binding
GO:0043056 P forward locomotion
GO:0043621 F protein self-association
GO:0045214 P sarcomere organization
GO:0045859 P regulation of protein kinase activity
GO:0046872 F metal ion binding
GO:0048739 P cardiac muscle cell development
GO:0048769 P sarcomerogenesis
GO:0050790 P regulation of catalytic activity
GO:0051015 F actin filament binding
GO:0051371 F muscle alpha-actinin binding
GO:0051592 P response to calcium ion
GO:0055002 P striated muscle cell development
GO:0055003 P cardiac myofibril assembly
GO:0055008 P cardiac muscle tissue morphogenesis
GO:0060048 P cardiac muscle contraction
GO:0060419 P heart growth
GO:0070062 C extracellular exosome
GO:0097493 F structural molecule activity conferring elasticity
GO:1901897 P regulation of relaxation of cardiac muscle
14688 O_BomoEE2321_complete:A_BomoEE_comp33887_c0_seq1
330bp
 eukaryotic_translation_initiation_factor_3_subunit_I_[Bombyx_mori]
GO:0001731 P formation of translation preinitiation complex
GO:0003743 F translation initiation factor activity
GO:0005737 C cytoplasm
GO:0005852 C eukaryotic translation initiation factor 3 complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006446 P regulation of translational initiation
GO:0016282 C eukaryotic 43S preinitiation complex
GO:0033290 C eukaryotic 48S preinitiation complex
14689 O_BomoEE23220_complete:A_BomoEE_comp70611_c0_seq1
152bp
14690 O_BomoEE23221_complete:A_BomoEE_comp70611_c0_seq1
134bp
14691 O_BomoEE23222_5prime_partial:A_BomoEE_comp70611_c0_seq1
133bp
14692 O_BomoEE23223_complete:A_BomoEE_comp70611_c0_seq1
118bp
14693 O_BomoEE23224_complete:A_BomoEE_comp70611_c0_seq2
1025bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101745941_[Bombyx_mori]
14694 O_BomoEE23225_complete:A_BomoEE_comp70611_c0_seq2
118bp
14695 O_BomoEE23226_complete:A_BomoEE_comp70613_c0_seq1
258bp
 PREDICTED:_protein_EMSY_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0016568 P chromatin organization
14696 O_BomoEE23227_3prime_partial:A_BomoEE_comp70613_c0_seq2
1034bp
 PREDICTED:_protein_EMSY_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0016568 P chromatin organization
14697 O_BomoEE23228_complete:A_BomoEE_comp70613_c0_seq2
157bp
14698 O_BomoEE23229_complete:A_BomoEE_comp70613_c0_seq3
1023bp
 PREDICTED:_protein_EMSY_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0016568 P chromatin organization
14699 O_BomoEE2322_complete:A_BomoEE_comp33887_c0_seq1
304bp
 serine/threonine_protein_phosphatase_6_[Bombyx_mori]
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000278 P mitotic cell cycle
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
14700 O_BomoEE23230_complete:A_BomoEE_comp70613_c0_seq3
157bp
previous next from show/95730

- SilkBase 1999-2023 -