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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
14311 O_BomoEE22881_complete:A_BomoEE_comp70540_c0_seq3
343bp
 PREDICTED:_uncharacterized_protein_LOC101746654_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046982 F protein heterodimerization activity
14312 O_BomoEE22882_complete:A_BomoEE_comp70540_c0_seq3
153bp
14313 O_BomoEE22883_complete:A_BomoEE_comp70540_c0_seq6
343bp
 PREDICTED:_uncharacterized_protein_LOC101746654_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046982 F protein heterodimerization activity
14314 O_BomoEE22884_complete:A_BomoEE_comp70540_c0_seq6
153bp
14315 O_BomoEE22885_complete:A_BomoEE_comp70545_c0_seq1
1219bp
 PREDICTED:_splicing_factor_3B_subunit_3_isoform_X1_[Amyelois_transitella]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0042177 P negative regulation of protein catabolic process
GO:0071013 C catalytic step 2 spliceosome
14316 O_BomoEE22886_complete:A_BomoEE_comp70545_c0_seq1
109bp
14317 O_BomoEE22887_complete:A_BomoEE_comp70545_c0_seq2
709bp
 PREDICTED:_splicing_factor_3B_subunit_3_isoform_X1_[Amyelois_transitella]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
14318 O_BomoEE22888_complete:A_BomoEE_comp70545_c0_seq2
471bp
 putative_Splicing_factor_3B_subunit_[Danaus_plexippus]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0042177 P negative regulation of protein catabolic process
GO:0071013 C catalytic step 2 spliceosome
14319 O_BomoEE22889_complete:A_BomoEE_comp70545_c0_seq2
109bp
14320 O_BomoEE2288_complete:A_BomoEE_comp33839_c0_seq1
153bp
 ribosomal_protein_S18_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0006412 P translation
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
14321 O_BomoEE22890_complete:A_BomoEE_comp70545_c0_seq3
709bp
 PREDICTED:_splicing_factor_3B_subunit_3_isoform_X1_[Amyelois_transitella]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
14322 O_BomoEE22891_complete:A_BomoEE_comp70545_c0_seq3
474bp
 putative_Splicing_factor_3B_subunit_[Danaus_plexippus]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0042177 P negative regulation of protein catabolic process
GO:0071013 C catalytic step 2 spliceosome
14323 O_BomoEE22892_complete:A_BomoEE_comp70545_c0_seq3
109bp
14324 O_BomoEE22893_3prime_partial:A_BomoEE_comp70551_c0_seq1
345bp
 Actin-related_protein_10_[Papilio_xuthus]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005869 C dynactin complex
GO:0007018 P microtubule-based movement
14325 O_BomoEE22894_5prime_partial:A_BomoEE_comp70551_c0_seq1
158bp
14326 O_BomoEE22895_5prime_partial:A_BomoEE_comp70551_c0_seq1
121bp
14327 O_BomoEE22896_3prime_partial:A_BomoEE_comp70551_c0_seq2
221bp
 Actin-related_protein_10_[Papilio_xuthus]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005869 C dynactin complex
GO:0007018 P microtubule-based movement
14328 O_BomoEE22897_5prime_partial:A_BomoEE_comp70551_c0_seq2
158bp
14329 O_BomoEE22898_5prime_partial:A_BomoEE_comp70551_c0_seq2
121bp
14330 O_BomoEE22899_complete:A_BomoEE_comp70551_c0_seq3
116bp
 PREDICTED:_actin-related_protein_10_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005869 C dynactin complex
GO:0007018 P microtubule-based movement
14331 O_BomoEE2289_complete:A_BomoEE_comp33840_c0_seq1
147bp
 sterol_carrier_protein_x_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0006694 P steroid biosynthetic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0008289 F lipid binding
GO:0015248 F sterol transporter activity
GO:0015914 P phospholipid transport
GO:0015918 P sterol transport
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0032385 P positive regulation of intracellular cholesterol transport
GO:0032934 F sterol binding
GO:0033814 F propanoyl-CoA C-acyltransferase activity
GO:1901373 P lipid hydroperoxide transport
14332 O_BomoEE228_5prime_partial:A_BomoEE_comp3358_c0_seq2
275bp
 putative_argininosuccinate_synthetase_[Danaus_plexippus]
GO:0000050 P urea cycle
GO:0000053 P argininosuccinate metabolic process
GO:0000166 F nucleotide binding
GO:0004055 F argininosuccinate synthase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006526 P arginine biosynthetic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0016874 F ligase activity
14333 O_BomoEE22900_5prime_partial:A_BomoEE_comp70551_c0_seq4
153bp
14334 O_BomoEE22901_complete:A_BomoEE_comp70551_c0_seq4
128bp
14335 O_BomoEE22902_5prime_partial:A_BomoEE_comp70551_c0_seq4
105bp
14336 O_BomoEE22903_3prime_partial:A_BomoEE_comp70551_c0_seq4
104bp
14337 O_BomoEE22904_complete:A_BomoEE_comp70551_c0_seq5
176bp
 PREDICTED:_actin-related_protein_10_[Papilio_machaon]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005869 C dynactin complex
GO:0007018 P microtubule-based movement
14338 O_BomoEE22905_5prime_partial:A_BomoEE_comp70551_c0_seq5
153bp
14339 O_BomoEE22906_5prime_partial:A_BomoEE_comp70551_c0_seq5
105bp
14340 O_BomoEE22907_3prime_partial:A_BomoEE_comp70551_c0_seq5
104bp
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