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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1411 O_BomoEE11270_complete:A_BomoEE_comp64930_c0_seq3
112bp
 PREDICTED:_E3_ubiquitin-protein_ligase_KCMF1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
1412 O_BomoEE11271_5prime_partial:A_BomoEE_comp64930_c0_seq4
188bp
1413 O_BomoEE11272_3prime_partial:A_BomoEE_comp64930_c0_seq4
166bp
 PREDICTED:_E3_ubiquitin-protein_ligase_KCMF1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
1414 O_BomoEE11273_5prime_partial:A_BomoEE_comp64930_c0_seq4
148bp
1415 O_BomoEE11274_complete:A_BomoEE_comp64930_c0_seq4
112bp
 PREDICTED:_E3_ubiquitin-protein_ligase_KCMF1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
1416 O_BomoEE11275_complete:A_BomoEE_comp64930_c0_seq4
100bp
 E3_ubiquitin-protein_ligase_KCMF1_[Papilio_machaon]
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
1417 O_BomoEE11276_5prime_partial:A_BomoEE_comp64933_c0_seq2
114bp
1418 O_BomoEE11277_3prime_partial:A_BomoEE_comp64934_c0_seq1
423bp
 PREDICTED:_C-terminal-binding_protein_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003713 F transcription coactivator activity
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008022 F protein C-terminus binding
GO:0008134 F transcription factor binding
GO:0008152 P metabolic process
GO:0016055 P Wnt signaling pathway
GO:0016360 P sensory organ precursor cell fate determination
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0019233 P sensory perception of pain
GO:0022416 P chaeta development
GO:0030111 P regulation of Wnt signaling pathway
GO:0031010 C ISWI-type complex
GO:0035220 P wing disc development
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043044 P chromatin remodeling
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046427 P positive regulation of receptor signaling pathway via JAK-STAT
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070491 F DNA-binding transcription factor binding
1419 O_BomoEE11278_complete:A_BomoEE_comp64934_c0_seq1
203bp
 hypothetical_protein_X975_24403,_partial_[Stegodyphus_mimosarum]
1420 O_BomoEE11279_5prime_partial:A_BomoEE_comp64934_c0_seq1
134bp
1421 O_BomoEE1127_internal:A_BomoEE_comp25048_c0_seq1
111bp
hypothetical_protein_[Bacillus_licheniformis]
1422 O_BomoEE11280_3prime_partial:A_BomoEE_comp64934_c0_seq2
423bp
 PREDICTED:_C-terminal-binding_protein_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003713 F transcription coactivator activity
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008022 F protein C-terminus binding
GO:0008134 F transcription factor binding
GO:0008152 P metabolic process
GO:0016055 P Wnt signaling pathway
GO:0016360 P sensory organ precursor cell fate determination
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0019233 P sensory perception of pain
GO:0022416 P chaeta development
GO:0030111 P regulation of Wnt signaling pathway
GO:0031010 C ISWI-type complex
GO:0035220 P wing disc development
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043044 P chromatin remodeling
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046427 P positive regulation of receptor signaling pathway via JAK-STAT
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070491 F DNA-binding transcription factor binding
1423 O_BomoEE11281_complete:A_BomoEE_comp64934_c0_seq2
203bp
 hypothetical_protein_X975_24403,_partial_[Stegodyphus_mimosarum]
1424 O_BomoEE11282_5prime_partial:A_BomoEE_comp64934_c0_seq2
134bp
1425 O_BomoEE11283_complete:A_BomoEE_comp64936_c0_seq1
101bp
1426 O_BomoEE11284_complete:A_BomoEE_comp64941_c0_seq1
219bp
 PREDICTED:_protein_N-lysine_methyltransferase_METTL20-like_isoform_X3_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008168 F methyltransferase activity
GO:0016279 F protein-lysine N-methyltransferase activity
GO:0016740 F transferase activity
GO:0018022 P peptidyl-lysine methylation
GO:0018023 P peptidyl-lysine trimethylation
GO:0032259 P methylation
GO:1904733 P negative regulation of electron transfer activity
GO:1904736 P negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase
1427 O_BomoEE11285_complete:A_BomoEE_comp64941_c0_seq2
219bp
 PREDICTED:_protein_N-lysine_methyltransferase_METTL20-like_isoform_X3_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008168 F methyltransferase activity
GO:0016279 F protein-lysine N-methyltransferase activity
GO:0016740 F transferase activity
GO:0018022 P peptidyl-lysine methylation
GO:0018023 P peptidyl-lysine trimethylation
GO:0032259 P methylation
GO:1904733 P negative regulation of electron transfer activity
GO:1904736 P negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase
1428 O_BomoEE11286_complete:A_BomoEE_comp64941_c0_seq2
151bp
 uncharacterized_LOC106115108_[Papilio_xuthus]
GO:0005634 C nucleus
GO:0006950 P response to stress
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0051726 P regulation of cell cycle
1429 O_BomoEE11287_complete:A_BomoEE_comp64941_c0_seq3
219bp
 PREDICTED:_protein_N-lysine_methyltransferase_METTL20-like_isoform_X3_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008168 F methyltransferase activity
GO:0016279 F protein-lysine N-methyltransferase activity
GO:0016740 F transferase activity
GO:0018022 P peptidyl-lysine methylation
GO:0018023 P peptidyl-lysine trimethylation
GO:0032259 P methylation
GO:1904733 P negative regulation of electron transfer activity
GO:1904736 P negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase
1430 O_BomoEE11288_complete:A_BomoEE_comp64941_c0_seq3
165bp
 uncharacterized_LOC106115108_[Papilio_xuthus]
GO:0005634 C nucleus
GO:0006950 P response to stress
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0051726 P regulation of cell cycle
1431 O_BomoEE11289_complete:A_BomoEE_comp64941_c0_seq5
219bp
 PREDICTED:_protein_N-lysine_methyltransferase_METTL20-like_isoform_X3_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008168 F methyltransferase activity
GO:0016279 F protein-lysine N-methyltransferase activity
GO:0016740 F transferase activity
GO:0018022 P peptidyl-lysine methylation
GO:0018023 P peptidyl-lysine trimethylation
GO:0032259 P methylation
GO:1904733 P negative regulation of electron transfer activity
GO:1904736 P negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase
1432 O_BomoEE1128_internal:A_BomoEE_comp25057_c0_seq1
172bp
 PREDICTED:_meckelin-like_[Amyelois_transitella]
1433 O_BomoEE11290_complete:A_BomoEE_comp64941_c0_seq5
103bp
 uncharacterized_LOC106115108_[Papilio_xuthus]
GO:0005634 C nucleus
GO:0006950 P response to stress
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0051726 P regulation of cell cycle
1434 O_BomoEE11291_complete:A_BomoEE_comp64944_c0_seq1
714bp
 PREDICTED:_DNA_mismatch_repair_protein_Mlh1_isoform_X1_[Amyelois_transitella]
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000712 P resolution of meiotic recombination intermediates
GO:0000793 C condensed chromosome
GO:0000794 C condensed nuclear chromosome
GO:0000795 C synaptonemal complex
GO:0001673 C male germ cell nucleus
GO:0002204 P somatic recombination of immunoglobulin genes involved in immune response
GO:0003682 F chromatin binding
GO:0003697 F single-stranded DNA binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005712 C chiasma
GO:0006281 P DNA repair
GO:0006298 P mismatch repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007060 P male meiosis chromosome segregation
GO:0007126 P meiotic cell cycle
GO:0007129 P homologous chromosome pairing at meiosis
GO:0007131 P reciprocal meiotic recombination
GO:0007140 P male meiotic nuclear division
GO:0007283 P spermatogenesis
GO:0008630 P intrinsic apoptotic signaling pathway in response to DNA damage
GO:0016020 C membrane
GO:0016321 P female meiosis chromosome segregation
GO:0016446 P somatic hypermutation of immunoglobulin genes
GO:0016447 P somatic recombination of immunoglobulin gene segments
GO:0016887 F ATP hydrolysis activity
GO:0030983 F mismatched DNA binding
GO:0032137 F guanine/thymine mispair binding
GO:0032389 C MutLalpha complex
GO:0032407 F MutSalpha complex binding
GO:0043060 P meiotic metaphase I plate congression
GO:0045132 P meiotic chromosome segregation
GO:0045141 P meiotic telomere clustering
GO:0045143 P homologous chromosome segregation
GO:0045190 P isotype switching
GO:0045950 P negative regulation of mitotic recombination
GO:0048477 P oogenesis
GO:0051257 P meiotic spindle midzone assembly
1435 O_BomoEE11292_complete:A_BomoEE_comp64944_c0_seq2
615bp
 PREDICTED:_DNA_mismatch_repair_protein_Mlh1_isoform_X1_[Amyelois_transitella]
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000712 P resolution of meiotic recombination intermediates
GO:0000793 C condensed chromosome
GO:0000794 C condensed nuclear chromosome
GO:0000795 C synaptonemal complex
GO:0001673 C male germ cell nucleus
GO:0002204 P somatic recombination of immunoglobulin genes involved in immune response
GO:0003682 F chromatin binding
GO:0003697 F single-stranded DNA binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005712 C chiasma
GO:0006281 P DNA repair
GO:0006298 P mismatch repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007060 P male meiosis chromosome segregation
GO:0007126 P meiotic cell cycle
GO:0007129 P homologous chromosome pairing at meiosis
GO:0007131 P reciprocal meiotic recombination
GO:0007140 P male meiotic nuclear division
GO:0007283 P spermatogenesis
GO:0008630 P intrinsic apoptotic signaling pathway in response to DNA damage
GO:0016020 C membrane
GO:0016321 P female meiosis chromosome segregation
GO:0016446 P somatic hypermutation of immunoglobulin genes
GO:0016447 P somatic recombination of immunoglobulin gene segments
GO:0016887 F ATP hydrolysis activity
GO:0030983 F mismatched DNA binding
GO:0032137 F guanine/thymine mispair binding
GO:0032389 C MutLalpha complex
GO:0032407 F MutSalpha complex binding
GO:0043060 P meiotic metaphase I plate congression
GO:0045132 P meiotic chromosome segregation
GO:0045141 P meiotic telomere clustering
GO:0045143 P homologous chromosome segregation
GO:0045190 P isotype switching
GO:0045950 P negative regulation of mitotic recombination
GO:0048477 P oogenesis
GO:0051257 P meiotic spindle midzone assembly
1436 O_BomoEE11293_complete:A_BomoEE_comp64944_c0_seq2
118bp
 PREDICTED:_DNA_mismatch_repair_protein_Mlh1_[Papilio_machaon]
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000712 P resolution of meiotic recombination intermediates
GO:0000793 C condensed chromosome
GO:0000794 C condensed nuclear chromosome
GO:0000795 C synaptonemal complex
GO:0001673 C male germ cell nucleus
GO:0002204 P somatic recombination of immunoglobulin genes involved in immune response
GO:0003682 F chromatin binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005712 C chiasma
GO:0006281 P DNA repair
GO:0006298 P mismatch repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007060 P male meiosis chromosome segregation
GO:0007126 P meiotic cell cycle
GO:0007129 P homologous chromosome pairing at meiosis
GO:0007131 P reciprocal meiotic recombination
GO:0007140 P male meiotic nuclear division
GO:0007283 P spermatogenesis
GO:0008630 P intrinsic apoptotic signaling pathway in response to DNA damage
GO:0016020 C membrane
GO:0016321 P female meiosis chromosome segregation
GO:0016446 P somatic hypermutation of immunoglobulin genes
GO:0016447 P somatic recombination of immunoglobulin gene segments
GO:0016887 F ATP hydrolysis activity
GO:0030983 F mismatched DNA binding
GO:0032137 F guanine/thymine mispair binding
GO:0032389 C MutLalpha complex
GO:0032407 F MutSalpha complex binding
GO:0043060 P meiotic metaphase I plate congression
GO:0045132 P meiotic chromosome segregation
GO:0045141 P meiotic telomere clustering
GO:0045143 P homologous chromosome segregation
GO:0045190 P isotype switching
GO:0045950 P negative regulation of mitotic recombination
GO:0048477 P oogenesis
GO:0051257 P meiotic spindle midzone assembly
1437 O_BomoEE11294_complete:A_BomoEE_comp64949_c0_seq1
126bp
1438 O_BomoEE11295_complete:A_BomoEE_comp64951_c0_seq1
795bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_TBC1_domain_family_member_31_[Bombyx_mori]
GO:0005813 C centrosome
1439 O_BomoEE11296_complete:A_BomoEE_comp64951_c0_seq1
427bp
 PREDICTED:_uncharacterized_protein_LOC106143327_[Amyelois_transitella]
1440 O_BomoEE11297_complete:A_BomoEE_comp64951_c0_seq1
106bp
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