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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
13921 O_BomoEE2252_complete:A_BomoEE_comp33750_c0_seq1
155bp
13922 O_BomoEE22530_3prime_partial:A_BomoEE_comp70426_c0_seq4
260bp
 PREDICTED:_probable_cytosolic_Fe-S_cluster_assembly_factor_GI11683_isoform_X2_[Bombyx_mori]
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
13923 O_BomoEE22531_3prime_partial:A_BomoEE_comp70426_c0_seq5
260bp
 PREDICTED:_probable_cytosolic_Fe-S_cluster_assembly_factor_GI11683_isoform_X2_[Bombyx_mori]
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
13924 O_BomoEE22532_complete:A_BomoEE_comp70426_c0_seq5
147bp
 hypothetical_protein_KGM_01773_[Danaus_plexippus]
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
13925 O_BomoEE22533_3prime_partial:A_BomoEE_comp70426_c0_seq6
260bp
 PREDICTED:_probable_cytosolic_Fe-S_cluster_assembly_factor_GI11683_isoform_X2_[Bombyx_mori]
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
13926 O_BomoEE22534_complete:A_BomoEE_comp70426_c0_seq7
133bp
 PREDICTED:_probable_cytosolic_Fe-S_cluster_assembly_factor_GI11683_isoform_X2_[Bombyx_mori]
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
13927 O_BomoEE22535_3prime_partial:A_BomoEE_comp70426_c0_seq8
132bp
 PREDICTED:_probable_cytosolic_Fe-S_cluster_assembly_factor_GI11683_isoform_X2_[Bombyx_mori]
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
13928 O_BomoEE22536_complete:A_BomoEE_comp70426_c0_seq9
133bp
 PREDICTED:_probable_cytosolic_Fe-S_cluster_assembly_factor_GI11683_isoform_X2_[Bombyx_mori]
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
13929 O_BomoEE22537_complete:A_BomoEE_comp70426_c0_seq10
133bp
 PREDICTED:_probable_cytosolic_Fe-S_cluster_assembly_factor_GI11683_isoform_X2_[Bombyx_mori]
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
13930 O_BomoEE22538_complete:A_BomoEE_comp70426_c0_seq11
288bp
 PREDICTED:_probable_cytosolic_Fe-S_cluster_assembly_factor_GL21135_[Amyelois_transitella]
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
13931 O_BomoEE22539_complete:A_BomoEE_comp70426_c0_seq12
147bp
 hypothetical_protein_KGM_01773_[Danaus_plexippus]
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
13932 O_BomoEE2253_complete:A_BomoEE_comp33750_c0_seq1
103bp
13933 O_BomoEE22540_complete:A_BomoEE_comp70426_c0_seq12
133bp
 PREDICTED:_probable_cytosolic_Fe-S_cluster_assembly_factor_GI11683_isoform_X2_[Bombyx_mori]
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
13934 O_BomoEE22541_complete:A_BomoEE_comp70426_c0_seq13
133bp
 PREDICTED:_probable_cytosolic_Fe-S_cluster_assembly_factor_GI11683_isoform_X2_[Bombyx_mori]
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
13935 O_BomoEE22542_3prime_partial:A_BomoEE_comp70426_c0_seq14
415bp
 PREDICTED:_probable_cytosolic_Fe-S_cluster_assembly_factor_GL21135_[Amyelois_transitella]
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
13936 O_BomoEE22543_3prime_partial:A_BomoEE_comp70426_c0_seq15
260bp
 PREDICTED:_probable_cytosolic_Fe-S_cluster_assembly_factor_GI11683_isoform_X2_[Bombyx_mori]
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
13937 O_BomoEE22544_complete:A_BomoEE_comp70428_c0_seq1
858bp
 PREDICTED:_E3_ubiquitin-protein_ligase_UHRF1-like_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000790 C chromatin
GO:0000791 C euchromatin
GO:0000792 C heterochromatin
GO:0000987 F cis-regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005657 C replication fork
GO:0005720 C heterochromatin
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0008327 F methyl-CpG binding
GO:0010216 P maintenance of DNA methylation
GO:0010390 P histone monoubiquitination
GO:0016363 C nuclear matrix
GO:0016567 P protein ubiquitination
GO:0016568 P chromatin organization
GO:0016574 P histone ubiquitination
GO:0016874 F ligase activity
GO:0031493 F obsolete nucleosomal histone binding
GO:0032270 P positive regulation of cellular protein metabolic process
GO:0035064 F methylated histone binding
GO:0042393 F histone binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0042802 F identical protein binding
GO:0044729 F hemi-methylated DNA-binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0090308 P regulation of DNA methylation-dependent heterochromatin assembly
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
13938 O_BomoEE22545_complete:A_BomoEE_comp70434_c1_seq1
106bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_eyes_shut-like_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0005201 F extracellular matrix structural constituent
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0009986 C cell surface
GO:0010378 P temperature compensation of the circadian clock
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031513 C non-motile cilium
GO:0042052 P rhabdomere development
13939 O_BomoEE22546_complete:A_BomoEE_comp70434_c1_seq2
109bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_eyes_shut-like_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0005201 F extracellular matrix structural constituent
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0009986 C cell surface
GO:0010378 P temperature compensation of the circadian clock
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031513 C non-motile cilium
GO:0042052 P rhabdomere development
13940 O_BomoEE22547_5prime_partial:A_BomoEE_comp70434_c1_seq3
292bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_eyes_shut-like_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0005201 F extracellular matrix structural constituent
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0009986 C cell surface
GO:0010378 P temperature compensation of the circadian clock
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031513 C non-motile cilium
GO:0042052 P rhabdomere development
13941 O_BomoEE22548_5prime_partial:A_BomoEE_comp70434_c1_seq3
125bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_eyes_shut-like_[Bombyx_mori]
13942 O_BomoEE22549_complete:A_BomoEE_comp70434_c1_seq4
109bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_eyes_shut-like_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0005201 F extracellular matrix structural constituent
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0009986 C cell surface
GO:0010378 P temperature compensation of the circadian clock
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031513 C non-motile cilium
GO:0042052 P rhabdomere development
13943 O_BomoEE2254_complete:A_BomoEE_comp33754_c0_seq1
336bp
 PREDICTED:_ATPase_ASNA1_homolog_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0045048 P protein insertion into ER membrane
GO:0046872 F metal ion binding
13944 O_BomoEE22550_5prime_partial:A_BomoEE_comp70434_c1_seq5
122bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_eyes_shut-like_[Bombyx_mori]
13945 O_BomoEE22551_5prime_partial:A_BomoEE_comp70434_c1_seq5
108bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_eyes_shut-like_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0005201 F extracellular matrix structural constituent
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0009986 C cell surface
GO:0010378 P temperature compensation of the circadian clock
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031513 C non-motile cilium
GO:0042052 P rhabdomere development
13946 O_BomoEE22552_5prime_partial:A_BomoEE_comp70434_c1_seq8
222bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_eyes_shut-like_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0005201 F extracellular matrix structural constituent
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0009986 C cell surface
GO:0010378 P temperature compensation of the circadian clock
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031513 C non-motile cilium
GO:0042052 P rhabdomere development
13947 O_BomoEE22553_5prime_partial:A_BomoEE_comp70434_c1_seq9
150bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_eyes_shut-like_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0005201 F extracellular matrix structural constituent
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0009986 C cell surface
GO:0010378 P temperature compensation of the circadian clock
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031513 C non-motile cilium
GO:0042052 P rhabdomere development
13948 O_BomoEE22554_5prime_partial:A_BomoEE_comp70434_c1_seq9
125bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_eyes_shut-like_[Bombyx_mori]
13949 O_BomoEE22555_5prime_partial:A_BomoEE_comp70434_c2_seq4
102bp
13950 O_BomoEE22556_complete:A_BomoEE_comp70435_c0_seq1
591bp
 PREDICTED:_ER_degradation-enhancing_alpha-mannosidase-like_protein_2_isoform_X2_[Bombyx_mori]
GO:0001948 F protein binding
GO:0004559 F alpha-mannosidase activity
GO:0004571 F mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006491 P N-glycan processing
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0036509 P trimming of terminal mannose on B branch
GO:0044322 C endoplasmic reticulum quality control compartment
GO:0097466 P ubiquitin-dependent glycoprotein ERAD pathway
GO:1904154 P positive regulation of retrograde protein transport, ER to cytosol
GO:1904380 P endoplasmic reticulum mannose trimming
GO:1904382 P mannose trimming involved in glycoprotein ERAD pathway
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