SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/95730
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
13741 O_BomoEE22368_complete:A_BomoEE_comp70387_c0_seq15
218bp
 Uncharacterized_protein_OBRU01_01696_[Operophtera_brumata]
13742 O_BomoEE22369_complete:A_BomoEE_comp70387_c0_seq15
165bp
13743 O_BomoEE2236_complete:A_BomoEE_comp33720_c0_seq2
481bp
 G_protein_pathway_suppressor_1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008180 C COP9 signalosome
GO:0010387 P COP9 signalosome assembly
GO:0010388 P protein deneddylation
13744 O_BomoEE22370_5prime_partial:A_BomoEE_comp70387_c0_seq16
320bp
 Uncharacterized_protein_OBRU01_01696_[Operophtera_brumata]
13745 O_BomoEE22371_complete:A_BomoEE_comp70387_c0_seq16
141bp
 Uncharacterized_protein_OBRU01_01696_[Operophtera_brumata]
13746 O_BomoEE22372_complete:A_BomoEE_comp70387_c0_seq16
123bp
13747 O_BomoEE22373_3prime_partial:A_BomoEE_comp70388_c0_seq1
597bp
 ATP-binding_cassette_sub-family_A_ABCA1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0051384 P response to glucocorticoid
GO:0055085 P transmembrane transport
GO:0097208 C alveolar lamellar body
GO:0097233 C alveolar lamellar body membrane
13748 O_BomoEE22374_3prime_partial:A_BomoEE_comp70388_c0_seq2
697bp
 ATP-binding_cassette_sub-family_A_ABCA1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005319 F lipid transporter activity
GO:0005524 F ATP binding
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042493 P response to xenobiotic stimulus
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0044267 P cellular protein metabolic process
GO:0051384 P response to glucocorticoid
GO:0055085 P transmembrane transport
GO:0097208 C alveolar lamellar body
GO:0097232 C lamellar body membrane
GO:0097233 C alveolar lamellar body membrane
13749 O_BomoEE22375_complete:A_BomoEE_comp70389_c0_seq1
276bp
 PREDICTED:_lachesin-like_[Bombyx_mori]
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016020 C membrane
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0031225 C anchored component of membrane
13750 O_BomoEE22376_complete:A_BomoEE_comp70389_c0_seq2
386bp
 PREDICTED:_lachesin-like_[Bombyx_mori]
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016020 C membrane
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0031225 C anchored component of membrane
13751 O_BomoEE22377_5prime_partial:A_BomoEE_comp70390_c0_seq1
291bp
 PREDICTED:_2-aminoethanethiol_dioxygenase_[Amyelois_transitella]
GO:0000098 P sulfur amino acid catabolic process
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0016491 F oxidoreductase activity
GO:0016702 F oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0046872 F metal ion binding
GO:0047800 F cysteamine dioxygenase activity
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
13752 O_BomoEE22378_complete:A_BomoEE_comp70391_c0_seq1
280bp
 PREDICTED:_homeobox_protein_ceh-24_[Bombyx_mori]
13753 O_BomoEE22379_5prime_partial:A_BomoEE_comp70391_c0_seq1
185bp
13754 O_BomoEE2237_complete:A_BomoEE_comp33720_c0_seq2
316bp
 PREDICTED:_Fanconi_anemia,_complementation_group_L_isoform_X1_[Bombyx_mori]
GO:0002230 P positive regulation of defense response to virus by host
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006513 P protein monoubiquitination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007276 P gamete generation
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0042127 P regulation of cell population proliferation
GO:0043240 C Fanconi anaemia nuclear complex
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0098792 P xenophagy
13755 O_BomoEE22380_complete:A_BomoEE_comp70391_c0_seq1
142bp
 PREDICTED:_homeobox_protein_ceh-24_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0043565 F sequence-specific DNA binding
13756 O_BomoEE22381_3prime_partial:A_BomoEE_comp70391_c0_seq2
285bp
 PREDICTED:_homeobox_protein_ceh-24_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0043565 F sequence-specific DNA binding
13757 O_BomoEE22382_complete:A_BomoEE_comp70391_c0_seq3
412bp
 PREDICTED:_homeobox_protein_ceh-24_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0043565 F sequence-specific DNA binding
13758 O_BomoEE22383_5prime_partial:A_BomoEE_comp70391_c0_seq3
154bp
13759 O_BomoEE22384_complete:A_BomoEE_comp70391_c0_seq4
270bp
 PREDICTED:_homeobox_protein_ceh-24_[Bombyx_mori]
13760 O_BomoEE22385_5prime_partial:A_BomoEE_comp70391_c0_seq5
161bp
13761 O_BomoEE22386_complete:A_BomoEE_comp70391_c0_seq6
280bp
 PREDICTED:_homeobox_protein_ceh-24_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0043565 F sequence-specific DNA binding
13762 O_BomoEE22387_3prime_partial:A_BomoEE_comp70391_c0_seq8
205bp
 PREDICTED:_homeobox_protein_ceh-24_[Bombyx_mori]
13763 O_BomoEE22388_complete:A_BomoEE_comp70394_c0_seq1
215bp
 Very_low-density_lipoprotein_receptor_[Papilio_xuthus]
GO:0001666 P response to hypoxia
GO:0005509 F calcium ion binding
GO:0005634 C nucleus
GO:0005905 C clathrin-coated pit
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007166 P cell surface receptor signaling pathway
GO:0007507 P heart development
GO:0007584 P response to nutrient
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0009725 P response to hormone
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021987 P cerebral cortex development
GO:0030229 F very-low-density lipoprotein particle receptor activity
GO:0030296 F protein tyrosine kinase activator activity
GO:0032496 P response to lipopolysaccharide
GO:0032869 P cellular response to insulin stimulus
GO:0034361 C very-low-density lipoprotein particle
GO:0034447 P very-low-density lipoprotein particle clearance
GO:0042149 P cellular response to glucose starvation
GO:0042493 P response to xenobiotic stimulus
GO:0045177 C apical part of cell
GO:0048471 C perinuclear region of cytoplasm
GO:0061098 P positive regulation of protein tyrosine kinase activity
GO:0071222 P cellular response to lipopolysaccharide
GO:0071347 P cellular response to interleukin-1
GO:0071456 P cellular response to hypoxia
13764 O_BomoEE22389_complete:A_BomoEE_comp70394_c0_seq2
820bp
 lipophorin_receptor_isoform_1_precursor_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001948 F protein binding
GO:0005509 F calcium ion binding
GO:0005615 C extracellular space
GO:0005905 C clathrin-coated pit
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021517 P ventral spinal cord development
GO:0030229 F very-low-density lipoprotein particle receptor activity
GO:0034185 F apolipoprotein binding
GO:0034189 F very-low-density lipoprotein particle binding
GO:0034361 C very-low-density lipoprotein particle
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0034447 P very-low-density lipoprotein particle clearance
GO:0038025 F reelin receptor activity
GO:0038026 P reelin-mediated signaling pathway
GO:0043235 C receptor complex
GO:0045860 P positive regulation of protein kinase activity
GO:0048306 F calcium-dependent protein binding
GO:0048813 P dendrite morphogenesis
GO:1900006 P positive regulation of dendrite development
13765 O_BomoEE2238_complete:A_BomoEE_comp33726_c0_seq1
527bp
 PREDICTED:_cytosolic_non-specific_dipeptidase_[Papilio_machaon]
GO:0004180 F carboxypeptidase activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016787 F hydrolase activity
GO:0016805 F dipeptidase activity
GO:0034701 F tripeptidase activity
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:0102008 F dipeptidase activity
13766 O_BomoEE22390_complete:A_BomoEE_comp70394_c0_seq2
215bp
 Very_low-density_lipoprotein_receptor_[Papilio_xuthus]
GO:0001666 P response to hypoxia
GO:0005509 F calcium ion binding
GO:0005634 C nucleus
GO:0005905 C clathrin-coated pit
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007166 P cell surface receptor signaling pathway
GO:0007507 P heart development
GO:0007584 P response to nutrient
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0009725 P response to hormone
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021987 P cerebral cortex development
GO:0030229 F very-low-density lipoprotein particle receptor activity
GO:0030296 F protein tyrosine kinase activator activity
GO:0032496 P response to lipopolysaccharide
GO:0032869 P cellular response to insulin stimulus
GO:0034361 C very-low-density lipoprotein particle
GO:0034447 P very-low-density lipoprotein particle clearance
GO:0042149 P cellular response to glucose starvation
GO:0042493 P response to xenobiotic stimulus
GO:0045177 C apical part of cell
GO:0048471 C perinuclear region of cytoplasm
GO:0061098 P positive regulation of protein tyrosine kinase activity
GO:0071222 P cellular response to lipopolysaccharide
GO:0071347 P cellular response to interleukin-1
GO:0071456 P cellular response to hypoxia
13767 O_BomoEE22391_complete:A_BomoEE_comp70394_c0_seq2
179bp
13768 O_BomoEE22392_complete:A_BomoEE_comp70394_c0_seq3
633bp
 PREDICTED:_lipophorin_receptor_isoform_X4_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001948 F protein binding
GO:0005509 F calcium ion binding
GO:0005615 C extracellular space
GO:0005905 C clathrin-coated pit
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021517 P ventral spinal cord development
GO:0030229 F very-low-density lipoprotein particle receptor activity
GO:0034185 F apolipoprotein binding
GO:0034189 F very-low-density lipoprotein particle binding
GO:0034361 C very-low-density lipoprotein particle
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0034447 P very-low-density lipoprotein particle clearance
GO:0038025 F reelin receptor activity
GO:0038026 P reelin-mediated signaling pathway
GO:0043235 C receptor complex
GO:0045860 P positive regulation of protein kinase activity
GO:0048306 F calcium-dependent protein binding
GO:0048813 P dendrite morphogenesis
GO:1900006 P positive regulation of dendrite development
13769 O_BomoEE22393_complete:A_BomoEE_comp70394_c0_seq3
215bp
 Very_low-density_lipoprotein_receptor_[Papilio_xuthus]
GO:0001666 P response to hypoxia
GO:0005509 F calcium ion binding
GO:0005634 C nucleus
GO:0005905 C clathrin-coated pit
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007166 P cell surface receptor signaling pathway
GO:0007507 P heart development
GO:0007584 P response to nutrient
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0009725 P response to hormone
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021987 P cerebral cortex development
GO:0030229 F very-low-density lipoprotein particle receptor activity
GO:0030296 F protein tyrosine kinase activator activity
GO:0032496 P response to lipopolysaccharide
GO:0032869 P cellular response to insulin stimulus
GO:0034361 C very-low-density lipoprotein particle
GO:0034447 P very-low-density lipoprotein particle clearance
GO:0042149 P cellular response to glucose starvation
GO:0042493 P response to xenobiotic stimulus
GO:0045177 C apical part of cell
GO:0048471 C perinuclear region of cytoplasm
GO:0061098 P positive regulation of protein tyrosine kinase activity
GO:0071222 P cellular response to lipopolysaccharide
GO:0071347 P cellular response to interleukin-1
GO:0071456 P cellular response to hypoxia
13770 O_BomoEE22394_complete:A_BomoEE_comp70394_c0_seq3
178bp
 PREDICTED:_lipophorin_receptor_isoform_X2_[Bombyx_mori]
GO:0002119 P nematode larval development
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005798 C Golgi-associated vesicle
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0015248 F sterol transporter activity
GO:0015918 P sterol transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0030139 C endocytic vesicle
GO:0030334 P regulation of cell migration
GO:0040017 P positive regulation of locomotion
GO:0040018 P positive regulation of multicellular organism growth
GO:0042395 P ecdysis, collagen and cuticulin-based cuticle
previous next from show/95730

- SilkBase 1999-2023 -