Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
13531	O_BomoEE22179_complete:A_BomoEE_comp70359_c0_seq7 136bp	Bomo_Chr25	hypothetical_protein_KGM_08994_[Danaus_plexippus]
13532	O_BomoEE2217_complete:A_BomoEE_comp33665_c0_seq1 1186bp	Bomo_Scaf018	PREDICTED:_pre-mRNA-splicing_factor_ATP-dependent_RNA_helicase_PRP16_[Amyelois_transitella]	GO:0000166 F nucleotide binding GO:0000398 P mRNA splicing, via spliceosome GO:0003676 F nucleic acid binding GO:0004004 F RNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005681 C spliceosomal complex GO:0005737 C cytoplasm GO:0006397 P mRNA processing GO:0008026 F helicase activity GO:0008380 P RNA splicing GO:0016787 F hydrolase activity GO:0044822 F RNA binding
13533	O_BomoEE22180_complete:A_BomoEE_comp70360_c0_seq2 318bp	Bomo_Scaf224	PREDICTED:_putative_tricarboxylate_transport_protein,_mitochondrial_[Papilio_xuthus]	GO:0003735 F structural constituent of ribosome GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0006412 P translation GO:0006810 P transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0055085 P transmembrane transport
13534	O_BomoEE22181_complete:A_BomoEE_comp70360_c0_seq2 177bp	Bomo_Scaf224
13535	O_BomoEE22182_complete:A_BomoEE_comp70360_c0_seq3 247bp	Bomo_Chr16	PREDICTED:_putative_tricarboxylate_transport_protein,_mitochondrial_[Papilio_xuthus]	GO:0003735 F structural constituent of ribosome GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0006412 P translation GO:0006810 P transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0055085 P transmembrane transport
13536	O_BomoEE22183_complete:A_BomoEE_comp70360_c0_seq3 125bp	Bomo_Chr16
13537	O_BomoEE22184_complete:A_BomoEE_comp70363_c1_seq3 149bp		hypothetical_protein_COPEUT_02402_[Coprococcus_eutactus_ATCC_27759]
13538	O_BomoEE22185_complete:A_BomoEE_comp70372_c0_seq1 630bp	Bomo_Chr11	PREDICTED:_ATP-binding_cassette_sub-family_G_member_1_[Bombyx_mori]	GO:0000139 C Golgi membrane GO:0000166 F nucleotide binding GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005543 F phospholipid binding GO:0005548 F phospholipid transporter activity GO:0005654 C nucleoplasm GO:0005739 C mitochondrion GO:0005768 C endosome GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0005794 C Golgi apparatus GO:0005886 C plasma membrane GO:0005887 C integral component of plasma membrane GO:0006355 P regulation of transcription, DNA-templated GO:0006810 P transport GO:0006869 P lipid transport GO:0008203 P cholesterol metabolic process GO:0009720 P detection of hormone stimulus GO:0009897 C external side of plasma membrane GO:0010033 P response to organic substance GO:0010745 P negative regulation of macrophage derived foam cell differentiation GO:0010872 P regulation of cholesterol esterification GO:0010875 P positive regulation of cholesterol efflux GO:0010887 P negative regulation of cholesterol storage GO:0010888 P negative regulation of lipid storage GO:0015485 F cholesterol binding GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016887 F ATP hydrolysis activity GO:0017127 F cholesterol transfer activity GO:0019534 F toxin transmembrane transporter activity GO:0030301 P cholesterol transport GO:0032367 P intracellular cholesterol transport GO:0033344 P cholesterol efflux GO:0033700 P phospholipid efflux GO:0033993 P response to lipid GO:0034041 F ABC-type sterol transporter activity GO:0034374 P low-density lipoprotein particle remodeling GO:0034375 P high-density lipoprotein particle remodeling GO:0034436 P glycoprotein transport GO:0034437 F obsolete glycoprotein transmembrane transporter activity GO:0042157 P lipoprotein metabolic process GO:0042632 P cholesterol homeostasis GO:0042803 F protein homodimerization activity GO:0042987 P amyloid precursor protein catabolic process GO:0043231 C intracellular membrane-bounded organelle GO:0043531 F ADP binding GO:0043691 P reverse cholesterol transport GO:0045542 P positive regulation of cholesterol biosynthetic process GO:0046982 F protein heterodimerization activity GO:0046983 F protein dimerization activity GO:0055037 C recycling endosome GO:0055085 P transmembrane transport GO:0055091 P phospholipid homeostasis GO:0055099 P cellular response to high density lipoprotein particle stimulus GO:1901998 P toxin transport
13539	O_BomoEE22186_complete:A_BomoEE_comp70372_c1_seq1 351bp	Bomo_Chr4	PREDICTED:_RNA-binding_protein_39_[Papilio_polytes]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0016607 C nuclear speck
13540	O_BomoEE22187_complete:A_BomoEE_comp70372_c1_seq1 105bp	Bomo_Chr4
13541	O_BomoEE22188_complete:A_BomoEE_comp70372_c1_seq1 103bp	Bomo_Chr4
13542	O_BomoEE22189_complete:A_BomoEE_comp70372_c1_seq2 351bp	Bomo_Chr4	PREDICTED:_RNA-binding_protein_39_[Papilio_polytes]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0016607 C nuclear speck
13543	O_BomoEE2218_5prime_partial:A_BomoEE_comp33665_c0_seq1 158bp	Bomo_Scaf018
13544	O_BomoEE22190_complete:A_BomoEE_comp70372_c1_seq2 105bp	Bomo_Chr4
13545	O_BomoEE22191_complete:A_BomoEE_comp70372_c1_seq2 103bp	Bomo_Chr4
13546	O_BomoEE22192_complete:A_BomoEE_comp70372_c1_seq3 351bp	Bomo_Chr4	PREDICTED:_RNA-binding_protein_39_[Papilio_polytes]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0016607 C nuclear speck
13547	O_BomoEE22193_complete:A_BomoEE_comp70372_c1_seq3 105bp	Bomo_Chr4
13548	O_BomoEE22194_complete:A_BomoEE_comp70372_c1_seq3 103bp	Bomo_Chr4
13549	O_BomoEE22195_complete:A_BomoEE_comp70372_c1_seq4 351bp	Bomo_Chr4	PREDICTED:_RNA-binding_protein_39_[Papilio_polytes]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0016607 C nuclear speck
13550	O_BomoEE22196_complete:A_BomoEE_comp70372_c1_seq4 105bp	Bomo_Chr4
13551	O_BomoEE22197_complete:A_BomoEE_comp70372_c1_seq4 103bp	Bomo_Chr4
13552	O_BomoEE22198_complete:A_BomoEE_comp70372_c1_seq5 351bp	Bomo_Chr4	PREDICTED:_RNA-binding_protein_39_[Papilio_polytes]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0016607 C nuclear speck
13553	O_BomoEE22199_complete:A_BomoEE_comp70372_c1_seq5 105bp	Bomo_Chr4
13554	O_BomoEE2219_complete:A_BomoEE_comp33665_c0_seq1 144bp	Bomo_Scaf018
13555	O_BomoEE221_5prime_partial:A_BomoEE_comp3295_c0_seq1 109bp	Bomo_Chr25
13556	O_BomoEE22200_complete:A_BomoEE_comp70372_c1_seq5 103bp	Bomo_Chr4
13557	O_BomoEE22201_complete:A_BomoEE_comp70372_c1_seq6 351bp	Bomo_Chr4	PREDICTED:_RNA-binding_protein_39_[Papilio_polytes]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0016607 C nuclear speck
13558	O_BomoEE22202_complete:A_BomoEE_comp70372_c1_seq6 105bp	Bomo_Chr4
13559	O_BomoEE22203_complete:A_BomoEE_comp70372_c1_seq6 103bp	Bomo_Chr4
13560	O_BomoEE22204_complete:A_BomoEE_comp70372_c1_seq7 351bp	Bomo_Chr4	PREDICTED:_RNA-binding_protein_39_[Papilio_polytes]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0016607 C nuclear speck