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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1291 O_BomoEE11162_5prime_partial:A_BomoEE_comp64824_c0_seq1
166bp
1292 O_BomoEE11163_5prime_partial:A_BomoEE_comp64824_c0_seq3
166bp
1293 O_BomoEE11164_complete:A_BomoEE_comp64826_c0_seq2
685bp
 PREDICTED:_zinc_finger_protein_271-like_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
1294 O_BomoEE11165_complete:A_BomoEE_comp64826_c0_seq3
460bp
 PREDICTED:_zinc_finger_protein_271-like_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
1295 O_BomoEE11166_complete:A_BomoEE_comp64826_c0_seq3
199bp
 PREDICTED:_zinc_finger_protein_271-like_isoform_X2_[Bombyx_mori]
1296 O_BomoEE11167_5prime_partial:A_BomoEE_comp64828_c0_seq1
113bp
1297 O_BomoEE11168_5prime_partial:A_BomoEE_comp64830_c0_seq1
1052bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_translational_activator_GCN1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005844 C polysome
GO:0006412 P translation
GO:0006417 P regulation of translation
GO:0008135 F translation factor activity, RNA binding
GO:0016020 C membrane
GO:0019887 F protein kinase regulator activity
GO:0019901 F protein kinase binding
GO:0033554 P cellular response to stress
GO:0033674 P positive regulation of kinase activity
GO:0034198 P cellular response to amino acid starvation
GO:0036003 P positive regulation of transcription from RNA polymerase II promoter in response to stress
GO:0043022 F ribosome binding
GO:0044822 F RNA binding
GO:0045859 P regulation of protein kinase activity
GO:1990253 P cellular response to leucine starvation
1298 O_BomoEE11169_complete:A_BomoEE_comp64830_c0_seq1
211bp
 hypothetical_protein_CaO19.5331_[Candida_albicans_SC5314]
1299 O_BomoEE1116_5prime_partial:A_BomoEE_comp24905_c0_seq1
115bp
1300 O_BomoEE11170_complete:A_BomoEE_comp64830_c0_seq1
167bp
1301 O_BomoEE11171_complete:A_BomoEE_comp64830_c0_seq1
106bp
1302 O_BomoEE11172_3prime_partial:A_BomoEE_comp64830_c0_seq2
689bp
 hypothetical_protein_KGM_13538_[Danaus_plexippus]
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005844 C polysome
GO:0006412 P translation
GO:0006417 P regulation of translation
GO:0008135 F translation factor activity, RNA binding
GO:0016020 C membrane
GO:0019887 F protein kinase regulator activity
GO:0019901 F protein kinase binding
GO:0033554 P cellular response to stress
GO:0033674 P positive regulation of kinase activity
GO:0034198 P cellular response to amino acid starvation
GO:0036003 P positive regulation of transcription from RNA polymerase II promoter in response to stress
GO:0043022 F ribosome binding
GO:0044822 F RNA binding
GO:0045859 P regulation of protein kinase activity
GO:1990253 P cellular response to leucine starvation
1303 O_BomoEE11173_complete:A_BomoEE_comp64830_c0_seq2
211bp
 hypothetical_protein_CaO19.5331_[Candida_albicans_SC5314]
1304 O_BomoEE11174_complete:A_BomoEE_comp64830_c0_seq2
176bp
1305 O_BomoEE11175_complete:A_BomoEE_comp64830_c0_seq2
174bp
1306 O_BomoEE11176_complete:A_BomoEE_comp64830_c0_seq2
106bp
1307 O_BomoEE11177_internal:A_BomoEE_comp64830_c0_seq3
1031bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_translational_activator_GCN1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005844 C polysome
GO:0006412 P translation
GO:0006417 P regulation of translation
GO:0008135 F translation factor activity, RNA binding
GO:0016020 C membrane
GO:0019887 F protein kinase regulator activity
GO:0019901 F protein kinase binding
GO:0033554 P cellular response to stress
GO:0033674 P positive regulation of kinase activity
GO:0034198 P cellular response to amino acid starvation
GO:0036003 P positive regulation of transcription from RNA polymerase II promoter in response to stress
GO:0043022 F ribosome binding
GO:0044822 F RNA binding
GO:0045859 P regulation of protein kinase activity
GO:1990253 P cellular response to leucine starvation
1308 O_BomoEE11178_complete:A_BomoEE_comp64830_c0_seq3
211bp
 hypothetical_protein_CaO19.5331_[Candida_albicans_SC5314]
1309 O_BomoEE11179_complete:A_BomoEE_comp64830_c0_seq3
174bp
1310 O_BomoEE1117_internal:A_BomoEE_comp24920_c0_seq1
129bp
1311 O_BomoEE11180_complete:A_BomoEE_comp64830_c0_seq3
167bp
1312 O_BomoEE11181_complete:A_BomoEE_comp64830_c0_seq3
106bp
1313 O_BomoEE11182_complete:A_BomoEE_comp64830_c0_seq4
710bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_translational_activator_GCN1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005844 C polysome
GO:0006412 P translation
GO:0006417 P regulation of translation
GO:0008135 F translation factor activity, RNA binding
GO:0016020 C membrane
GO:0019887 F protein kinase regulator activity
GO:0019901 F protein kinase binding
GO:0033554 P cellular response to stress
GO:0033674 P positive regulation of kinase activity
GO:0034198 P cellular response to amino acid starvation
GO:0036003 P positive regulation of transcription from RNA polymerase II promoter in response to stress
GO:0043022 F ribosome binding
GO:0044822 F RNA binding
GO:0045859 P regulation of protein kinase activity
GO:1990253 P cellular response to leucine starvation
1314 O_BomoEE11183_complete:A_BomoEE_comp64830_c0_seq4
211bp
 hypothetical_protein_CaO19.5331_[Candida_albicans_SC5314]
1315 O_BomoEE11184_complete:A_BomoEE_comp64830_c0_seq4
176bp
1316 O_BomoEE11185_complete:A_BomoEE_comp64830_c0_seq4
106bp
1317 O_BomoEE11186_5prime_partial:A_BomoEE_comp64835_c0_seq1
234bp
1318 O_BomoEE11187_5prime_partial:A_BomoEE_comp64835_c0_seq1
223bp
1319 O_BomoEE11188_3prime_partial:A_BomoEE_comp64835_c0_seq1
146bp
 PREDICTED:_neurofilament_medium_polypeptide-like_[Bombyx_mori]
1320 O_BomoEE11189_complete:A_BomoEE_comp64841_c0_seq1
372bp
 PREDICTED:_ceramide_phosphoethanolamine_synthase_[Papilio_xuthus]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016780 F phosphotransferase activity, for other substituted phosphate groups
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