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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
12541 O_BomoEE21288_complete:A_BomoEE_comp70150_c2_seq1
299bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101735915_[Bombyx_mori]
12542 O_BomoEE21289_complete:A_BomoEE_comp70153_c5_seq1
409bp
 PREDICTED:_zinc_finger_protein_91-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
12543 O_BomoEE2128_complete:A_BomoEE_comp33530_c0_seq1
101bp
12544 O_BomoEE21290_complete:A_BomoEE_comp70153_c5_seq1
391bp
 PREDICTED:_zinc_finger_protein_91-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
12545 O_BomoEE21291_complete:A_BomoEE_comp70153_c5_seq1
118bp
12546 O_BomoEE21292_complete:A_BomoEE_comp70153_c5_seq2
391bp
 PREDICTED:_zinc_finger_protein_91-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
12547 O_BomoEE21293_complete:A_BomoEE_comp70153_c5_seq2
255bp
 PREDICTED:_zinc_finger_protein_91-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
12548 O_BomoEE21294_complete:A_BomoEE_comp70153_c5_seq2
118bp
12549 O_BomoEE21295_complete:A_BomoEE_comp70153_c5_seq3
391bp
 PREDICTED:_zinc_finger_protein_91-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
12550 O_BomoEE21296_complete:A_BomoEE_comp70153_c5_seq3
118bp
12551 O_BomoEE21297_complete:A_BomoEE_comp70153_c5_seq4
472bp
 PREDICTED:_zinc_finger_protein_91-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
12552 O_BomoEE21298_complete:A_BomoEE_comp70153_c5_seq4
118bp
12553 O_BomoEE21299_complete:A_BomoEE_comp70153_c5_seq5
387bp
 PREDICTED:_zinc_finger_protein_91-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
12554 O_BomoEE2129_complete:A_BomoEE_comp33530_c0_seq1
100bp
12555 O_BomoEE212_3prime_partial:A_BomoEE_comp3202_c1_seq1
163bp
 PREDICTED:_uncharacterized_protein_LOC105842449_[Bombyx_mori]
12556 O_BomoEE21300_complete:A_BomoEE_comp70153_c5_seq5
166bp
12557 O_BomoEE21301_complete:A_BomoEE_comp70153_c5_seq6
475bp
 PREDICTED:_zinc_finger_protein_91-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
12558 O_BomoEE21302_complete:A_BomoEE_comp70153_c5_seq6
166bp
12559 O_BomoEE21303_5prime_partial:A_BomoEE_comp70153_c5_seq6
117bp
12560 O_BomoEE21304_complete:A_BomoEE_comp70153_c5_seq7
475bp
 PREDICTED:_zinc_finger_protein_91-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
12561 O_BomoEE21305_complete:A_BomoEE_comp70153_c5_seq7
166bp
12562 O_BomoEE21306_complete:A_BomoEE_comp70153_c5_seq8
387bp
 PREDICTED:_zinc_finger_protein_91-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
12563 O_BomoEE21307_complete:A_BomoEE_comp70153_c5_seq8
166bp
12564 O_BomoEE21308_5prime_partial:A_BomoEE_comp70153_c5_seq8
117bp
12565 O_BomoEE21309_complete:A_BomoEE_comp70158_c0_seq1
372bp
 FERM_domain-containing_protein_5_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0008092 F cytoskeletal protein binding
GO:0008150 P biological_process
GO:0019898 C extrinsic component of membrane
12566 O_BomoEE2130_complete:A_BomoEE_comp33530_c0_seq2
1303bp
 MLE_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000785 C chromatin
GO:0000805 C X chromosome
GO:0003676 F nucleic acid binding
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003725 F double-stranded RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0007549 P dosage compensation
GO:0008026 F helicase activity
GO:0008340 P determination of adult lifespan
GO:0009047 P dosage compensation by hyperactivation of X chromosome
GO:0016456 C X chromosome located dosage compensation complex, transcription activating
GO:0016457 P dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome
GO:0016787 F hydrolase activity
GO:0031453 P positive regulation of heterochromatin assembly
GO:0044822 F RNA binding
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048675 P axon extension
GO:0072487 C MSL complex
12567 O_BomoEE21310_complete:A_BomoEE_comp70158_c0_seq1
140bp
 PREDICTED:_FERM_domain-containing_protein_5_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0008092 F cytoskeletal protein binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019898 C extrinsic component of membrane
12568 O_BomoEE21311_complete:A_BomoEE_comp70158_c0_seq1
110bp
12569 O_BomoEE21312_complete:A_BomoEE_comp70158_c0_seq2
522bp
 FERM_domain-containing_protein_5_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0008092 F cytoskeletal protein binding
GO:0008150 P biological_process
GO:0019898 C extrinsic component of membrane
12570 O_BomoEE21313_complete:A_BomoEE_comp70158_c0_seq2
110bp
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